BAC Information

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BAC

Clone NameB6Ng01-294H23
Chromosome3 (Build37)
Map Location 23,136,515 - 23,137,520
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675593, LOC100040378, LOC623751
Downstream geneLOC100039548, EG635702
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294H23.bB6Ng01-294H23.g
ACCGA090608GA090609
length1,1891,005
definitionB6Ng01-294H23.b B6Ng01-294H23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactaaatggctgagaagcacctaaaaaatgt
tcaacatccttggtcatcagggaaatgcaaatcaaaacaatcctgagatt
ccacctcacacaagtcagattggctaagatcaacaactcaggtgacagca
gatgctggtgaagatgtggagaaagagggacactcctccattgttggtga
gattgaaagctgatacaaccattctggaaatcagtcttgtgtttcttcag
aaatttggacatagtactacctgaggagccaggtatacctctcctgggca
tatacccaaaagatactcgaacatataacaaggacatgtgctctgctatg
ttcagaggagccttatttataatagccagaagccataaagaaccaagatg
tactttgacagaggaagaaaatgtggtaccattacaaaatggagtactat
tcgctattaaaaacaatgacttcatgaaattcttaggcaaatggatggaa
ctaggaaatatcatcctgagtgaggtaacctaatccccccaaaacacaca
tgacatacacatacaaataagtgaatattagcccaaaagcttggaatacc
caagatacaaatcacagaccacatgatgctcaacaagaataaagaccaaa
gtttggatactttggtccttcttagaagaggtaacaaaatacccattgga
gtagatacagagacaaagtgtggagcaaagactaaaagaaaggccacccg
gagactgcccaccttgagttccatcccatatacagtaatcaaactcagac
ttgtggatgccaagaagttgacaggagccttatatagctgcctcctgaga
gattctgccagtacctgacaaatacaaggtggatgctagcagccaaccaa
agaactgagcaagagttcccaatggagaagttagagaaagggactgaagg
agatgaaggggtctgtagcttcataggaggacaccagaccccctcacttc
cagagtctgggactaaacaacacaaagaatacacatgaggatccatggct
tcactgcatatgtagcagagaatgctgttgctgacatcagtgtgtggaga
aggcctggtctgttaggactctatgcccagtgtaggaatgctggatggaa
tgaacgtgcgtggtactggggtgggcacaactcagccat
gaattcctgtcctgacttcctctgatgataaattgtgatgtgaatgaata
agccaaataaactcctctccaatgacaaaaaaacaaacagtaaatatcac
aaaatgatttcaaatcttctgcactgaacattttcaaatattactaatat
gagttaaagtttaaatacataagcaaattaactctttatatctatcaaac
acctgattctaaattgtatgtgaacataacggtacctaaaatataaaaaa
aaatgtcttaaaaataaaataacattttaaggcttaacttatatagttaa
aatgcttatgttagttatacgataaggtgtgggggaggtacaggagacat
gtcataagttagggcaataaaaaaggccacaaagacaaagaaattatttt
acctgaaataaacactgaagccagaaattgtcccagaccagtgtttttaa
agtgcaatgattttcataagaaatctcaaaagaacacagcaacaagatga
cattttacatcatcattatgcagtggtgatgaaaaagtagatcttggttg
gttaaaactagattttaatgatgtctaagcattaatacaaaattgagata
aacataaaatgtgaaattaccaacttcaggaagaaaattatatggttgga
actttttcaaatatttatgaaactaaaccaaacctgtagtcatacaagtg
taatataatttgtaatttaataaaattgagattatgatcttggtaattca
atttaataaagggattgttgcttgtgaagaaatgtttccaagacacatat
ctgggaggatttgtataattatataagtggctctccagattctttaaacc
aaaatgaatgaatgaatgacatacaagaagctaaataagaagaagcacaa
ttgaagtccttgaatcttacttagaagagataaatagtcatagagaccgg
gtaaaagaaaggaactggatgggaacagggaatggggggagggggaaatg
ggtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23136515_23137520
seq2: B6Ng01-294H23.g_69_1073 (reverse)

seq1  AGACCCATT--CCCCT--CCCCATTCCCTG-TCCCATCCAGTTCCTTTCT  45
      |||||||||  |||||  |||||||||||| |||||||||||||||||||
seq2  AGACCCATTTCCCCCTCCCCCCATTCCCTGTTCCCATCCAGTTCCTTTCT  50

seq1  TTTA-CCGGTCTCTTATGACTATTTTATTCTCCTTTCTAAGTAAGATTCA  94
      |||| |||||||| |||||||||||   ||||  ||||||||||||||||
seq2  TTTACCCGGTCTC-TATGACTATTT--ATCTC--TTCTAAGTAAGATTCA  95

seq1  AGGACCTTCAATTGTGCCTTCTTTCTTATTTAGCTTCTTTGTATGTCATT  144
      |||| ||||||||||| |||| ||||||||||||||| ||||||||||||
seq2  AGGA-CTTCAATTGTG-CTTC-TTCTTATTTAGCTTC-TTGTATGTCATT  141

seq1  CATTCATTCATTTTGGTTTAAAGAATCTGGAGAGCCACTTATATAATTAT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTCATTTTGGTTTAAAGAATCTGGAGAGCCACTTATATAATTAT  191

seq1  ACAAATCCTCCCAGATATGTGTCTTGGAAACATTTCTTCACAAGCAACAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCCTCCCAGATATGTGTCTTGGAAACATTTCTTCACAAGCAACAA  241

seq1  TCCC-TTATTAAATTGAATTACCAAGATCATAATCTCAATTTTATTAAAT  293
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTATTAAATTGAATTACCAAGATCATAATCTCAATTTTATTAAAT  291

seq1  TACAAATTATATTACACTTGTATGACTACAGGTTTGGTTTAGTTTCATAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTATATTACACTTGTATGACTACAGGTTTGGTTTAGTTTCATAA  341

seq1  ATATTTGAAAAAGTTCCAACCATATAATTTTCTTCCTGAAGTTGGTAATT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGAAAAAGTTCCAACCATATAATTTTCTTCCTGAAGTTGGTAATT  391

seq1  TCACATTTTATGTTTATCTCAATTTTGTATTAATGCTTAGACATCATTAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTTATGTTTATCTCAATTTTGTATTAATGCTTAGACATCATTAA  441

seq1  AATCTAGTTTTAACCAACCAAGATCTACTTTTTCATCACCACTGTA-AAT  492
      |||||||||||||||||||||||||||||||||||||||||||| | |||
seq2  AATCTAGTTTTAACCAACCAAGATCTACTTTTTCATCACCACTGCATAAT  491

seq1  GATGATGTAAAATGTCATCTTGTTGCTGTGTTCTTTTGAGATTTCTTATG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGTAAAATGTCATCTTGTTGCTGTGTTCTTTTGAGATTTCTTATG  541

seq1  AAAATCATTGCACTTTAAAAACACTGGTCTGGGACAATTTCTGGCTTCAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATTGCACTTTAAAAACACTGGTCTGGGACAATTTCTGGCTTCAG  591

seq1  TGTTTATTTCAGGTAAAATAATTTCTTTGTCTTTGTGGCCTTTTTTATTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTCAGGTAAAATAATTTCTTTGTCTTTGTGGCCTTTTTTATTG  641

seq1  CCCTAACTTATGACATGTCTCCTGTACCTCCCCCACACCTTATCGTATAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAACTTATGACATGTCTCCTGTACCTCCCCCACACCTTATCGTATAA  691

seq1  CTAACATAAGCATTTTAACTATATAAGTTAAGCCTTAAAATGTTATTTTA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATAAGCATTTTAACTATATAAGTTAAGCCTTAAAATGTTATTTTA  741

seq1  TTTTTAAGACATTTTTTTTTATATTTTAGGTACCGTTATGTTCACATACA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGACATTTTTTTTTATATTTTAGGTACCGTTATGTTCACATACA  791

seq1  ATTTAGAATCAGGTGTTTGATAGATATAAAGAGTTAATTTGCTTATGTAT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAATCAGGTGTTTGATAGATATAAAGAGTTAATTTGCTTATGTAT  841

seq1  TTAAACTTTAACTCATATTAGTAATATTTGAAAATGTTCAGTGCAGAAGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTTTAACTCATATTAGTAATATTTGAAAATGTTCAGTGCAGAAGA  891

seq1  TTTGAAATCATTTTGTGATATTTACTGTTTGTTTTTTTGTCATTGGAGAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATCATTTTGTGATATTTACTGTTTGTTTTTTTGTCATTGGAGAG  941

seq1  GAGTTTATTTGGCTTATTCATTCACATCACAATTTATCATCAGAGGAAGT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATTTGGCTTATTCATTCACATCACAATTTATCATCAGAGGAAGT  991

seq1  CAGGACAGGAATTC  1006
      ||||||||||||||
seq2  CAGGACAGGAATTC  1005