BAC Information

Click to search

BAC

Clone NameB6Ng01-295D22
Chromosome3 (Build37)
Map Location 45,658,170 - 45,659,336
singlet/doubletsinglet
Overlap geneLOC671801
Upstream geneLOC676484, LOC100039296, Pcdh10, LOC100039282, LOC433580
Downstream geneEG241989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295D22.bB6Ng01-295D22.g
ACCGA091162GA091163
length1,2001,178
definitionB6Ng01-295D22.b B6Ng01-295D22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacgtataagtaaacttattgattcaacaaactagggtttagtga
attcatttctttgattagtcactggattcttatcttggatgatcattttt
tatgcttgtcaacacaatattaatgtcacaacatttgaggcctgaattga
tacacttcagtaacaaagatagtttgaaatggtagcattatctctactag
agatccatcatgaagctgaagataagctttctgagggtagaatatccatg
aagacaatcttgatacaactgtcctttcccatgtggcaaagaattgcata
tctacttgcttgagttggtttcattgtctgtgacaggagtgaaatgggtg
aaaaagcatttcatatgggctatcctgtctaactttgaactttctggtgg
ggtaaggtggagaatcacaagactagtctcatactttttgagatgtggaa
tagcatacctccttaatgaattctgtctgtcacaacagtatgaagaccct
gtcaaataattgaaatatcatgggatatattacagtctttgcaagtagca
cctatggcacagtaccataaacaggctgcagtatcaattatgtggccctt
gtctggaaaataagacacccaagagaggttaatctgtcagcctagaaaaa
acttgctgataaaagggagaacttacaaaaacgaataatatgcacatatc
aaccagttgtctataaattagtaggcaaaactgggagtaggagggggagg
cagcactggcttgaattttgtcaatgtgaagcatgaaaaagaaaaaaaaa
acatatttgaatcttccataaatacctctagctgatatccaaacatttag
cagccatgagaagaatcagactaggagaaagagaattataagtggtaaaa
gatatccaggagggtttatctataatacatatgaaagtacaaatcaatga
atagccatgtagatggatccttaataatatcctggtagtgtaaacaatga
tactaggggaatatttgcctatgactactagaaataggagacttttaaga
aagaactctcacagctgactcataattcagtggcgtatggggacaattct
gagggctgcaaggcaacctgagtattcaacctactactcatcctctctgg
aaactaaatttcctggccaatgtctcctcctaaagggaagtgtaaaatac

gaattcttacacaggttaaataaggagtctctctatcatacatatatcaa
atatatgtatgtgagtatgtatatgtctgtttctatgggcatacctatgt
attacatatattcctatataatttaagtattgtttaaaaaaaaacttttc
ctgtactctaatatgatatgcaccagtggtgctctgatatttacaaattt
atgaaatcagggaatgatatcaaccttctatccagttaatgactaattaa
attttctcttaaggtgtagaacctttctcctgaggagcagcagataaaat
ctttaattcttcagtattcacatttcccagtgaggctatctatggctttt
tttcataataagtgacttaccagcagtatttgctgaagactttatgtcat
ctgacctcttttgattatcattgcaaatgatattgtcatctttgccaaat
atatctacatagttgtcaatcatgatttggataattgacatctgtaacaa
caaggcaaaaacaagatcctctgtcattttacagagtttacaaaattgaa
atcaataaaaaattgaaatataaatgttgaggaaaatagcagttactacg
agcaaatatgaacttgtgaaacgaatcctctgtgaaatggagactctaag
ttctttgcaattaacttaacctggttaaaatttcatacatattgcaaaaa
aaatggaggaactactaaagcaaggtaagatatcagagctgatatgctgc
caaaataaccatgtgtggatcaaattaatgacttcaaagggtttcttgaa
ttggtgattatttgccatgatgtgaggaggaggtggagtttcactgtgac
agtttgcatgggatgctggtcttattccaggcatcacaatatacgatacc
atttttgtgacaccttttaagtgttttaagtggcttggtttcctggagga
agtatgccattgggttagaatttatgtttactgaagccaggtgtcatttg
cagtgtactctctgtgcttcatgtttgtgcctaagatgagagccaatgct
tctctttcctgcagccatgctctctgtcatgaccttgaagggaactgtaa
atctctcttacagctctaagttctccaaaattaaacgtttatttctatat
gattaacgttagtcctgggtgtttatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_45658170_45659336
seq2: B6Ng01-295D22.g_65_1242

seq1  GAATTCTTACACAGGTTAAATAAGGAGTCTCTCTATCATACATATATCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACACAGGTTAAATAAGGAGTCTCTCTATCATACATATATCAA  50

seq1  ATATATGTATGTGAGTATGTATATGTCTGTTTCTATGGGCATACCTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTATGTGAGTATGTATATGTCTGTTTCTATGGGCATACCTATGT  100

seq1  ATTACATATATTCCTATATAATTTAAGTATTGTTTAAAAAAAAACTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATATATTCCTATATAATTTAAGTATTGTTTAAAAAAAAACTTTTC  150

seq1  CTGTACTCTAATATGATATGCACCAGTGGTGCTCTGATATTTACAAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTCTAATATGATATGCACCAGTGGTGCTCTGATATTTACAAATTT  200

seq1  ATGAAATCAGGGAATGATATCAACCTTCTATCCAGTTAATGACTAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATCAGGGAATGATATCAACCTTCTATCCAGTTAATGACTAATTAA  250

seq1  ATTTTCTCTTAAGGTGTAGAACCTTTCTCCTGAGGAGCAGCAGATAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCTTAAGGTGTAGAACCTTTCTCCTGAGGAGCAGCAGATAAAAT  300

seq1  CTTTAATTCTTCAGTATTCACATTTCCCAGTGAGGCTATCTATGGCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTCTTCAGTATTCACATTTCCCAGTGAGGCTATCTATGGCTTTT  350

seq1  TTTCATAATAAGTGACTTACCAGCAGTATTTGCTGAAGACTTTATGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAATAAGTGACTTACCAGCAGTATTTGCTGAAGACTTTATGTCAT  400

seq1  CTGACCTCTTTTGATTATCATTGCAAATGATATTGTCATCTTTGCCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTCTTTTGATTATCATTGCAAATGATATTGTCATCTTTGCCAAAT  450

seq1  ATATCTACATAGTTGTCAATCATGATTTGGATAATTGACATCTGTAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTACATAGTTGTCAATCATGATTTGGATAATTGACATCTGTAACAA  500

seq1  CAAGGCAAAAACAAGATCCTCTGTCATTTTACAGAGTTTACAAAATTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAAAAACAAGATCCTCTGTCATTTTACAGAGTTTACAAAATTGAA  550

seq1  ATCAATAAAAAATTGAAATATAAATGTTGAGGAAAATAGCAGTTACTACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAAAAAATTGAAATATAAATGTTGAGGAAAATAGCAGTTACTACG  600

seq1  AGCAAATATGAACTTGTGAAACGAATCCTCTGTGAAATGGAGACTCTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATATGAACTTGTGAAACGAATCCTCTGTGAAATGGAGACTCTAAG  650

seq1  TTCTTTGCAATTAACTTAACCTGGTTAAAATTTCATACATATTGCAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGCAATTAACTTAACCTGGTTAAAATTTCATACATATTGCAAAAA  700

seq1  AAATGGAGGAACTACTAAAGCAAGGTAAGATATCAGAGCTGATATGCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGGAACTACTAAAGCAAGGTAAGATATCAGAGCTGATATGCTGC  750

seq1  CAAAATAACCATGTGTGGATCAAATTAATGACTTCAAAGGGTTTCTTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAACCATGTGTGGATCAAATTAATGACTTCAAAGGGTTTCTTGAA  800

seq1  TTGGTGATTATTTGCCATGATGTGAGGAGGAGGTGGAGTTTCACTGTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGATTATTTGCCATGATGTGAGGAGGAGGTGGAGTTTCACTGTGAC  850

seq1  AGTTTGCATGGGATGCTGGTCTTATTCCAGGCATCACAATATACGATACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCATGGGATGCTGGTCTTATTCCAGGCATCACAATATACGATACC  900

seq1  ATTTTTGTGACACCTTTTAAGTGTTTTAAGTGGCTTGGTTTCCTGGAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTGACACCTTTTAAGTGTTTTAAGTGGCTTGGTTTCCTGGAGGA  950

seq1  AGTATGCCATT-GGTTAGAATTTATGTTTACTGAAGCCAGGTGTCATTTG  999
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCCATTGGGTTAGAATTTATGTTTACTGAAGCCAGGTGTCATTTG  1000

seq1  CAGTGTACTCTCTGTGCTTCATGTTTGTTGCCTAAGATGAGAGCC-ATGC  1048
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  CAGTGTACTCTCTGTGCTTCATGTTTG-TGCCTAAGATGAGAGCCAATGC  1049

seq1  TCCTC-TTCCTGCAGCCATGCTCCTCTGTCATGACTTTGAAGG--ACTGT  1095
      | ||| |||||||||||||||| |||||||||||| |||||||  |||||
seq2  TTCTCTTTCCTGCAGCCATGCT-CTCTGTCATGACCTTGAAGGGAACTGT  1098

seq1  -AATCTCTC-TACAGCTCTAAG---TCCCAAA-TAAACATTTATTTC--T  1137
       |||||||| ||||||||||||   ||| ||| ||||| ||||||||  |
seq2  AAATCTCTCTTACAGCTCTAAGTTCTCCAAAATTAAACGTTTATTTCTAT  1148

seq1  ATGAGTTACCTTAGTCCTGGTGTTTTATTA  1167
      |||| | || ||||||||||   |||||||
seq2  ATGATTAACGTTAGTCCTGGGTGTTTATTA  1178