BAC Information

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BAC

Clone NameB6Ng01-295K16
Chromosome3 (Build37)
Map Location 134,840,116 - 134,841,040
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668862, LOC100039199, Cxxc4, Ppia-ps3_1390.1, LOC100039234, Tacr3, LOC229837, LOC100039290
Downstream geneEG620439, Cenpe, Bdh2, C80638, 4933425K02Rik, Zcd2, Ube2d3, Manba, LOC668745, Nfkb1, ENSMUSG00000045520, Slc39a8, LOC100039350, LOC383923, Bank1, LOC100039477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295K16.bB6Ng01-295K16.g
ACCGA091476GA091477
length927551
definitionB6Ng01-295K16.b B6Ng01-295K16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtagaccaaacgaagacctggaggctagtggaaaaattcaggt
atgaaaaggcaagagcctaaactaaagtgggggcagaatcaaactggaga
ggctcatactttcagatttaatagaaggcaatcaagctggattcatttct
acataaaataaagcaaggtgtccaaaatttctgacttggaaaaattggca
cagcctataaagaatgcaagccaggtgtggtgccacgcacctgtaatgcc
agcactcaaaagtcagagacaggggtgttattggcacaatcccagcagag
acagacaagaaagactcttgccaaaagataaagaacacaaaagaatgttc
atgtgtgaaaattatgataaaagaaatagtgaaaatcaaaaggggtgtct
atgatgtggccagatacacataatcaggacatatcctaacacaggaaatc
tagactgcttaatcatctcctctctttattgctgtgacaactttgtgagt
tcagtactatccccctacacatgcaaatgagaaaccaatcaggaaattac
acaacaacactagaacaaggtttgtaaaaggttttctcaatactttgtct
tccagaggattgatgggaagactggccaagaacataaactctttaacagc
gatagtgcctgatcctaaacagattaagaaccagagaaataaccattaat
tcaagagctgatatgtcaatttcaattatcactagttgcatataatacaa
ctaacatagctggaaaacccctaaaatatttgccaagcatgcatattttg
atatatatcattttatttaatattagtgaaaatactaatcatttctacct
ttgcaggactgggagaagcttaatgacaagttctttcttaaactattgct
attctgtgtgtgtgtgtgtgtgtgtgt
agtttggaaacgtgtattaaagagccactaaaaacccaggctgcataggt
gtaaaggaaacggagagaggcttgaaaaaagacactgtgctactcgaatg
cctgatctctccaagacttttgtcaaagaggtttttggcatcgcatgaca
gaatcacttgggtttttctttcaatgtgtttgtatggtggattatgttga
tggattttcatacattgtaataccctgggatgaagcctacttgatcatgg
tggatggtatttttgatgtgttcttggattattttactaagtattcttgt
gtcaatgttcataagggaaattgtctgaaattcactttctttattgagtc
tttgtgtggtttaggtattagggtggctgtggcttcaaagagcacgtttg
gcagtgtttcttatgttttcatcttgtgggatagtttgaggagtattcat
attagctcctctttgaaaggctggtagtagaattctgggctaaaaccatc
tggccctgggcttttttttttttttttttttttttttggggggagatttt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_134840116_134841040
seq2: B6Ng01-295K16.b_50_976

seq1  GAATTCTGTAGACCAAACGAAGACCTGGAGGCTAGTGGAAAAATTCAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGACCAAACGAAGACCTGGAGGCTAGTGGAAAAATTCAGGT  50

seq1  ATGAAAAGGCAAGAGCCTAAACTAAAGTGGGGGCAGAATCAAACTGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGGCAAGAGCCTAAACTAAAGTGGGGGCAGAATCAAACTGGAGA  100

seq1  GGCTCATACTTTCAGATTTAATAGAAGGCAATCAAGCTGGATTCATTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATACTTTCAGATTTAATAGAAGGCAATCAAGCTGGATTCATTTCT  150

seq1  ACATAAAATAAAGCAAGGTGTCCAAAATTTCTGACTTGGAAAAATTGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAATAAAGCAAGGTGTCCAAAATTTCTGACTTGGAAAAATTGGCA  200

seq1  CAGCCTATAAAGAATGCAAGCCAGGTGTGGTGCCACGCACCTGTAATGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTATAAAGAATGCAAGCCAGGTGTGGTGCCACGCACCTGTAATGCC  250

seq1  AGCACTCAAAAGTCAGAGACAGGGGTGTTATTGGCACAATCCCAGCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCAAAAGTCAGAGACAGGGGTGTTATTGGCACAATCCCAGCAGAG  300

seq1  ACAGACAAGAAAGACTCTTGCCAAAAGATAAAGAACACAAAAGAATGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAAGAAAGACTCTTGCCAAAAGATAAAGAACACAAAAGAATGTTC  350

seq1  ATGTGTGAAAATTATGATAAAAGAAATAGTGAAAATCAAAAGGGGTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGAAAATTATGATAAAAGAAATAGTGAAAATCAAAAGGGGTGTCT  400

seq1  ATGATGTGGCCAGATACACATAATCAGGACATATCCTAACACAGGAAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGGCCAGATACACATAATCAGGACATATCCTAACACAGGAAATC  450

seq1  TAGACTGCTTAATCATCTCCTCTCTTTATTGCTGTGACAACTTTGTGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGCTTAATCATCTCCTCTCTTTATTGCTGTGACAACTTTGTGAGT  500

seq1  TCAGTACTATCCCCCTACACATGCAAATGAGAAACCAATCAGGAAATTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACTATCCCCCTACACATGCAAATGAGAAACCAATCAGGAAATTAC  550

seq1  ACAACAACACTAGAACAAGGTTTGTAAAAGGTTTTCTCAATACTTTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACACTAGAACAAGGTTTGTAAAAGGTTTTCTCAATACTTTGTCT  600

seq1  TCCAGAGGATTGATGGGAAGACTGGCCAAGAACATAAACTCTTTAACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGATTGATGGGAAGACTGGCCAAGAACATAAACTCTTTAACAGC  650

seq1  GATAGTGCCTGATCCTAAACAGATTAAGAACCAGAGAAATAACCATTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTGCCTGATCCTAAACAGATTAAGAACCAGAGAAATAACCATTAAT  700

seq1  TCAAGAGCTGATATGTCAATTTCAATTATCACTAGTTGCATATAATACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGCTGATATGTCAATTTCAATTATCACTAGTTGCATATAATACAA  750

seq1  CTAACATAGCTGGAAAACCCCTAAAATATTTGCCAAGCATGCATATTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATAGCTGGAAAACCCCTAAAATATTTGCCAAGCATGCATATTTTG  800

seq1  ATATATATCATTTTATTTAATATTAGTGAAAATACTAATCATTTCTACC-  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATATATATCATTTTATTTAATATTAGTGAAAATACTAATCATTTCTACCT  850

seq1  TTGCAGGACT-GGAGAAGCTTAATGACAAGTTCTTTCTTAAACTATTGCT  898
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGACTGGGAGAAGCTTAATGACAAGTTCTTTCTTAAACTATTGCT  900

seq1  ATTCTGTGTGTGTGTGTGTGTGTGTGT  925
      |||||||||||||||||||||||||||
seq2  ATTCTGTGTGTGTGTGTGTGTGTGTGT  927