BAC Information

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BAC

Clone NameB6Ng01-296J03
Chromosome3 (Build37)
Map Location 3,490,996 - 3,492,148
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667655, LOC100039140
Downstream geneHnf4g, EG383815, LOC100039157, LOC100039167, LOC667709
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296J03.bB6Ng01-296J03.g
ACCGA092149GA092150
length1,2061,155
definitionB6Ng01-296J03.b B6Ng01-296J03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcattgtgttccatagtttgggtatgttgtggcttcattttc
attaaactctaaaatgtctttaaactctttctttatctattccttgacta
aggcataattaagtgttcttcagcttccatatgaatgttggctttctatt
atttatgttgttattaaagattagctttagtccatggtaatctaatagga
ttcatgggataatttcagtaattttgtatctgttgaagcctgttttgtga
ctaattatatggtcgattttggagaagatgtcatgaggtgctgagaagaa
ggtatttccttttgttttaggataaaatgttctgtagatatcttttcaat
ccattttctttcataacttctgttagtttcaatgtgtctgcactatgttt
ctgtttctaggatctttccattgataaacgtggggtgttgaagtctccca
ctattattgtgtgaggtgcaatttgtgcttggaactttactatagtttct
ttaatggatgtggctgtccttgcatttggagcatagatattcagaattga
gagtttatcttggaatattttacgtttgatgagtatgaagtgcccctcct
tgtcttttttgataactttggattggaaatcaattttatttgatattaga
atggctaccccagcttgtttctttggaccatttgcttggaaaatcgtttt
ccagccctttactctgaggcagtgtctgtctttttctctgaggtgggttt
cctgtaagcagcaaaaaattgggtcttttttatgcagtcagtctattagt
ctatgtctttttatttgggagttgagtactttgatattaagagatattaa
ggaaaagtaacttttgctttctgttacttttgttattagagttggtattc
tgttcccatggctgtcttcttttgggtttgttgaaggattactttcttgc
tttttctagagcgtagtttctgtctttgtgttggtgttttcctatattat
cctctgaaattttcccattattatctggattcatggaaagattattgtgt
gaaatgtggctttgtcatgggaatacttgcttcttctctatgatgagaag
ttgctggtataaaatcctgggttggcatttgtggtttctaggttctgtat
cggtccaggatctcctgacttccaatccctctgtgatgaaaaagcatctg
cgatag

gaattccagtgatatcatggtatgctccctctccccataaaaggtggcat
aaatcagcacatatgaacattcaaaacagattttcctcttctgttttcct
atgtgtacattttcattttctttcccaaattgttcattgtaaaagaatgt
ttgtggcatgtttcataatttgaccgctagatctcactttgcctttcctg
taagactttttcataagtctttttgttttcatttgccccagtggtcactg
atctctgaaacaaagattggaagaccatgtggtcatagggagggcagaga
tgattcttcccccaccagccagaccagaaagagtcaccttttctcagcca
ctctatccaccctagagccacacaaaatatcctatataaaagattatcag
acttctccatcaaactgctctttgagaaaggttgtgactctatttcctct
acagtaaattttggagaggccttttccattgttcctgtcaatacttgggg
attttatgaaggcaattaataaggcatgccactctgttggaacaatgtcc
tcccaaggagcaggtctaagctccccaacagtcatggagaccttggcatg
tctatatcatttgaaggtctgagcccctttctgagaaaaccctgccatgt
gtttcctaggttctgattcattatccataatgataaaaactctctcaatg
ttcagaaaaattacaatacctggaggaagaatctttttagctgattttta
aaaacaattttgcttttaaaaattgctagttatggctcagtttagaaagt
cagatgtaaattgatttttgaaactcaagttattgctatggtttaccctc
tgatcttttctgtgatagaaagttaacagttaattaaggataaatttttc
taattagtttcctgctcaattacatttcccttctccttaccaatatttct
atgcccaatcactgggcaacaaagctttcaaatgtgtttctcctgagaac
atgcaaagtgctacaatatttttggtatttgggtctatctaatgttagct
tctttgtctttgaatcttgacatcagaactttactgcagaatcttctagc
tactcttcatcacccctcagaaattataaagaccatacattaatcaataa
aaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_3490996_3492148
seq2: B6Ng01-296J03.g_67_1221 (reverse)

seq1  ATTTTTTATTGATAAATTGTTATTGTCTATATAATCT-TGA-GGGTGATG  48
      ||||||||||||| |||   ||| |||| |||||| | ||| ||||||||
seq2  ATTTTTTATTGATTAAT--GTATGGTCTTTATAATTTCTGAGGGGTGATG  48

seq1  AAGAGTAGGTTAGAAGGAATCTGCAGTAAAG-TCTGAATGTCAGGA-TCA  96
      ||||||| | ||||| || |||||||||||| |||| |||||| || |||
seq2  AAGAGTA-GCTAGAA-GATTCTGCAGTAAAGTTCTG-ATGTCAAGATTCA  95

seq1  AAGAACAAAGAAGCTACAATTAGATAGA-CCAAATACCAAAAATATTGTA  145
      ||| ||||||||||||  |||||||||| |||||||||||||||||||||
seq2  AAG-ACAAAGAAGCTAACATTAGATAGACCCAAATACCAAAAATATTGTA  144

seq1  GCACTTTGCATG-TCTCAGGAGAAACACATTTG-AAGCTTTGTTGCCCAG  193
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  GCACTTTGCATGTTCTCAGGAGAAACACATTTGAAAGCTTTGTTGCCCAG  194

seq1  TGATTGGGCATAGAAATATTGGTAAGGAGAA-GGAAATGTAATTGAGCAG  242
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGATTGGGCATAGAAATATTGGTAAGGAGAAGGGAAATGTAATTGAGCAG  244

seq1  GAAACTAATTAGAAAAATTTATCCTTAATTAACTGTTAACTTTCTATCAC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAATTAGAAAAATTTATCCTTAATTAACTGTTAACTTTCTATCAC  294

seq1  AGAAAAGATCAGAGGGTAAACCATAGCAATAACTTGAGTTTCAAAAATCA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGATCAGAGGGTAAACCATAGCAATAACTTGAGTTTCAAAAATCA  344

seq1  ATTTACATCTGACTTTCTAAACTGAGCCATAACTAGCAATTTTTAAAAGC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATCTGACTTTCTAAACTGAGCCATAACTAGCAATTTTTAAAAGC  394

seq1  AAAATTGTTTTTAAAAATCAGCTAAAAAGATTCTTCCTCCAGGTATTGTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTTTTTAAAAATCAGCTAAAAAGATTCTTCCTCCAGGTATTGTA  444

seq1  ATTTTTCTGAACATTGAGAGAGTTTTTATCATTATGGATAATGAATCAGA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTGAACATTGAGAGAGTTTTTATCATTATGGATAATGAATCAGA  494

seq1  ACCTAGGAAACACATGGCAGGGTTTTCTCAGAAAGGGGCTCAGACCTTCA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGAAACACATGGCAGGGTTTTCTCAGAAAGGGGCTCAGACCTTCA  544

seq1  AATGATATAGACATGCCAAGGTCTCCATGACTGTTGGGGAGCTTAGACCT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATAGACATGCCAAGGTCTCCATGACTGTTGGGGAGCTTAGACCT  594

seq1  GCTCCTTGGGAGGACATTGTTCCAACAGAGTGGCATGCCTTATTAATTGC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTGGGAGGACATTGTTCCAACAGAGTGGCATGCCTTATTAATTGC  644

seq1  CTTCATAAAATCCCCAAGTATTGACAGGAACAATGGAAAAGGCCTCTCCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAAAATCCCCAAGTATTGACAGGAACAATGGAAAAGGCCTCTCCA  694

seq1  AAATTTACTGTAGAGGAAATAGAGTCACAACCTTTCTCAAAGAGCAGTTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTACTGTAGAGGAAATAGAGTCACAACCTTTCTCAAAGAGCAGTTT  744

seq1  GATGGAGAAGTCTGATAATCTTTTATATAGGATATTTTGTGTGGCTCTAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGAAGTCTGATAATCTTTTATATAGGATATTTTGTGTGGCTCTAG  794

seq1  GGTGGATAGAGTGGCTGAGAAAAGGTGACTCTTTCTGGTCTGGCTGGTGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATAGAGTGGCTGAGAAAAGGTGACTCTTTCTGGTCTGGCTGGTGG  844

seq1  GGGAAGAATCATCTCTGCCCTCCCTATGACCACATGGTCTTCCAATCTTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAATCATCTCTGCCCTCCCTATGACCACATGGTCTTCCAATCTTT  894

seq1  GTTTCAGAGATCAGTGACCACTGGGGCAAATGAAAACAAAAAGACTTATG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGAGATCAGTGACCACTGGGGCAAATGAAAACAAAAAGACTTATG  944

seq1  AAAAAGTCTTACAGGAAAGGCAAAGTGAGATCTAGCGGTCAAATTATGAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTCTTACAGGAAAGGCAAAGTGAGATCTAGCGGTCAAATTATGAA  994

seq1  ACATGCCACAAACATTCTTTTACAATGAACAATTTGGGAAAGAAAATGAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCACAAACATTCTTTTACAATGAACAATTTGGGAAAGAAAATGAA  1044

seq1  AATGTACACATAGGAAAACAGAAGAGGAAAATCTGTTTTGAATGTTCATA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACACATAGGAAAACAGAAGAGGAAAATCTGTTTTGAATGTTCATA  1094

seq1  TGTGCTGATTTATGCCACCTTTTATGGGGAGAGGGAGCATACCATGATAT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGATTTATGCCACCTTTTATGGGGAGAGGGAGCATACCATGATAT  1144

seq1  CACTGGAATTC  1153
      |||||||||||
seq2  CACTGGAATTC  1155


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