BAC Information

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BAC

Clone NameB6Ng01-296L21
Chromosome3 (Build37)
Map Location 132,108,743 - 132,109,896
singlet/doubletsinglet
Overlap genenone
Upstream genePapss1, Olfr375-ps1, Dkk2, LOC100039018
Downstream geneEG433653, LOC668857, Scye1, A630047E20Rik, LOC668858, Npnt, Gstcd, Ints12, 9130221D24Rik, Ppa2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296L21.bB6Ng01-296L21.g
ACCGA092273GA092274
length1,1581,188
definitionB6Ng01-296L21.b B6Ng01-296L21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataaggaagcatttgcgaagggcagatttgctgaatgttttctt
ggcattgattgaggggattcgcgaactgtctcttgggtcccttgcagctt
gttagtgataactcttcgggttggcagtggtaagtaagaagcaaaagaaa
actggctgtgaaatctgtcagtttgttaacagggaaagaaggctccatgt
caccctcccccgaatgatgattttaggtagccttgacttaagtttcctct
atcaaaatctttctcccctcagccttctgttgtatttagtggtgtaacta
catatccagctactgaagactgactatgagccattttttttacttcttct
caatcctccttctcaatcacattcaattaatcatgaagtctaattgatgc
tacccactcatgactgaatccacactagctctccatcttccagtgatcct
cgtccagatcttccccatcaccttctcgctgcctctgtaactcctccatg
catctcctaacaccactcttcccatagcttattagtcacactattttttc
taaagaacaaatttcaatgatgcctgtcctgtgatttaagatctcagttg
gctccgtgcatcctaaggaaccaaatcaaagctttggagcatgacacgca
aaaactttcatgtccctaaatgagttgctggcctcagtccctccacagcc
cttccaaacaccctgtatcctagccacagggaaaataatcacggtttcct
agctgttctggtatcctttcgtgcttcataatattacagtggattctgtt
ttccctttttggccctcctctctctttcctatctcttgaattcctaggca
cttcctttgggttctcaaaattcatgtcagatgttaaaaaacagaataca
cataaaactcacttacaaaaaccaggttataagctgtctttcatctgtct
gggtaacatcccagcatttaaactgtaagcacttagggggaaaaaaaaaa
gcatgtatttgctctgttttatgtttgtatcatcaggacctaacacatga
tggaagtcgatagatgatccttcaaaagtaagtcttccattgaacaaaga
tctactgaatgtgtaccactagatggtgtgaccatgaagccctgtttgtg
tcaagttc
gaattcactttcagaggcaggatgatagagacatggaaacaggaagaaga
cacacggctgcacctaaagaaaaaccaaattagggctggagagatagctc
agcccttcaaggctaggcttacttcaaaagcctgtactttaaaaaactgg
aaaatctaattgaaatggacgaatttctagatagatgtcacatagcaaag
ttaaacggagggcaggtaaaccatcgaaacagtcctataacctctaagga
aatagaagcagtcattaaaagtctccgaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaacaacaacaacaacaaca
acaaaaacaacaacaacaacaacatcaacaacaaagcctggggccaaata
gttctagtgcagaattctaccagacattcaagaaagagtgaataccaata
ctcctcaaaccattccacaaaacagaaacagaaaaaacactgctacagtc
actctgatacttaaaccacacaaagatttaacaaagaaagagaatttcag
accaattgcacttataaacatcaatgtaaaaatattcaataaaattgttg
caaactgaatccaagaacacttcaaaaacattattcaccacaatcaagca
ggctttatcccaggtgtgatgggactattcaatatacaaaaatccatcaa
tttaatccactatataaagaaactgaaagactaaaatcagataatcatct
cattagatgctgaaaaagcctttgacaaaatccaacactccttcatatta
aaagtcctggagagatcaggaattcgggacacatacctaaacataagaaa
tgcaatatacagcaagacaataaccaacatcaaattaaatatagagaaac
ttaaagcaattccattaaagtcaggacaagacaaggctgcctacttcttc
cccaagttttttcaatatagtttcttgaagttctagctagagcaattaga
taacaaaaagagattagagatacaatttggaaagaagaagtaaggagtca
ctatttgagcattatgtgatagtatacataaaaagattcccaaaatttct
aacagaaaacttcttatagcctggatagcactctccagcaaggtggcttg
tgttagattaaaaattttaaccctctcaaatgtgcgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132108743_132109896
seq2: B6Ng01-296L21.b_48_1205

seq1  GAATTCATAAGGAAGCATTTGCGAAGGGCAGATTTGCTGAATGTTTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGGAAGCATTTGCGAAGGGCAGATTTGCTGAATGTTTTCTT  50

seq1  GGCATTGATTGAGGGGATTCGCGAACTGTCTCTTGGGTCCCTTGCAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGATTGAGGGGATTCGCGAACTGTCTCTTGGGTCCCTTGCAGCTT  100

seq1  GTTAGTGATAACTCTTCGGGTTGGCAGTGGTAAGTAAGAAGCAAAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGATAACTCTTCGGGTTGGCAGTGGTAAGTAAGAAGCAAAAGAAA  150

seq1  ACTGGCTGTGAAATCTGTCAGTTTGTTAACAGGGAAAGAAGGCTCCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTGTGAAATCTGTCAGTTTGTTAACAGGGAAAGAAGGCTCCATGT  200

seq1  CACCCTCCCCCGAATGATGATTTTAGGTAGCCTTGACTTAAGTTTCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCCCCCGAATGATGATTTTAGGTAGCCTTGACTTAAGTTTCCTCT  250

seq1  ATCAAAATCTTTCTCCCCTCAGCCTTCTGTTGTATTTAGTGGTGTAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATCTTTCTCCCCTCAGCCTTCTGTTGTATTTAGTGGTGTAACTA  300

seq1  CATATCCAGCTACTGAAGACTGACTATGAGCCATTTTTTTTACTTCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCCAGCTACTGAAGACTGACTATGAGCCATTTTTTTTACTTCTTCT  350

seq1  CAATCCTCCTTCTCAATCACATTCAATTAATCATGAAGTCTAATTGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTCCTTCTCAATCACATTCAATTAATCATGAAGTCTAATTGATGC  400

seq1  TACCCACTCATGACTGAATCCACACTAGCTCTCCATCTTCCAGTGATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACTCATGACTGAATCCACACTAGCTCTCCATCTTCCAGTGATCCT  450

seq1  CGTCCAGATCTTCCCCATCACCTTCTCGCTGCCTCTGTAACTCCTCCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCAGATCTTCCCCATCACCTTCTCGCTGCCTCTGTAACTCCTCCATG  500

seq1  CATCTCCTAACACCACTCTTCCCATAGCTTATTAGTCACACTATTTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCTAACACCACTCTTCCCATAGCTTATTAGTCACACTATTTTTTC  550

seq1  TAAAGAACAAATTTCAATGATGCCTGTCCTGTGATTTAAGATCTCAGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAACAAATTTCAATGATGCCTGTCCTGTGATTTAAGATCTCAGTTG  600

seq1  GCTCCGTGCATCCTAAGGAACCAAATCAAAGCTTTGGAGCATGACACGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCGTGCATCCTAAGGAACCAAATCAAAGCTTTGGAGCATGACACGCA  650

seq1  AAAACTTTCATGTCCCTAAATGAGTTGCTGGCCTCAGTCCCTCCACAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTCATGTCCCTAAATGAGTTGCTGGCCTCAGTCCCTCCACAGCC  700

seq1  CTTCCAAACACCCTGTATCCTAGCCACAGGGAAAATAATCACGGTTTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAACACCCTGTATCCTAGCCACAGGGAAAATAATCACGGTTTCCT  750

seq1  AGCTGTTCTGGTATCCTTTCGTGCTTCATAATATTACAGTGGATTCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTCTGGTATCCTTTCGTGCTTCATAATATTACAGTGGATTCTGTT  800

seq1  TTCCCTTTTTGGCCCTCCTCTCTCTTTCCTATCTCTTGAATTCCTAGGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTTTGGCCCTCCTCTCTCTTTCCTATCTCTTGAATTCCTAGGCA  850

seq1  CTTCCTTTGGGTTCTCAAAATTCATGTCAGATGTTAAAAAACAGAATACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTGGGTTCTCAAAATTCATGTCAGATGTTAAAAAACAGAATACA  900

seq1  CATAAAACTCACTTACAAAAACCAGGTTATAAGCTGTCTTTCATCTGTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAACTCACTTACAAAAACCAGGTTATAAGCTGTCTTTCATCTGTCT  950

seq1  GGGTAACATCCCAGCATTTAAACTGTAAGCACTTAGGGGG-AAAAAAAAA  999
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGGTAACATCCCAGCATTTAAACTGTAAGCACTTAGGGGGAAAAAAAAAA  1000

seq1  GCATGTTATTTGCTCTGTTTTATGTTTGTATCATCAGGACCT-ACACATG  1048
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  GCATG-TATTTGCTCTGTTTTATGTTTGTATCATCAGGACCTAACACATG  1049

seq1  ATGGGAAGTCGATAGATGATCCTTCAAAAGTAAGTCTTCCAATTTGACAA  1098
      || ||||||||||||||||||||||||||||||||||||| |||  ||||
seq2  AT-GGAAGTCGATAGATGATCCTTCAAAAGTAAGTCTTCC-ATTGAACAA  1097

seq1  AGATCTACTGATGTTGTACCACTAGAT-GTGTGA-CATGA--GCCTG-TT  1143
      |||||||||||   ||||||||||||| |||||| |||||   |||| ||
seq2  AGATCTACTGAATGTGTACCACTAGATGGTGTGACCATGAAGCCCTGTTT  1147

seq1  GTGTCATGTTC  1154
      |||||| ||||
seq2  GTGTCAAGTTC  1158