BAC Information

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BAC

Clone NameB6Ng01-296M21
Chromosome3 (Build37)
Map Location 82,103,694 - 82,104,209
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC229443, LOC100041901, Ctso, Tdo2, Accn5, Gucy1b3, Gucy1a3
Downstream geneMtap9, Npy2r, LOC100041940, EG633285, Lrat, Fgg, Fga, Fgb, Plrg1, EG627094, Dchs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296M21.bB6Ng01-296M21.g
ACCGA092321GA092322
length5101,178
definitionB6Ng01-296M21.b B6Ng01-296M21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caggggtctagtggggcaactggtctttcatgcagagggcttcaatcatg
cataggaataccaagagagaaggagagtgacagagaaaggcagagagaga
gagagagagagagagagagagagagagagagagagagagagagagaagat
gcattagacaaggggcatggggggatgggggcaggagagagaaggggtgt
cacttagaaagttcaagtgctgtgaagcttctagcttgaggggaaaaaag
acaataaaaccaagcaaccgctggctgtccaccacacaaagaagtcaata
ctttgacaccaaggttttttttaagaaagtaaaagcttttgttgcaggct
aaatgtacaccccaaatttgtcaggcttctccttacagggagaaggggtg
gcaatagtgggaagtttggggtgtctttgcacaggcacaatccagatact
tctaatatagcatctagtgtctctccttccctcccccacacccccggagg
gggggggggg
gaattctcctttatatccttcagacttgcagccccatctacccattgcag
atgaaaccaatgacagaccaagggcattacttgccccgtctctagtttgt
tgaaccaactagagcttattagatttacttacagaagcatgtatgactgc
agcaaatccatcactaacaagtccactccagcatgaccagtggcatacca
gagctgcatcattacagttccctatataacttgtgcaaagctacatcaaa
tggttccatctctcccaaccattgtttgctacttgtataaatattgcgga
ggggcagtcctcaggagttgtaattgtcctgtgagtctgcaccctttccc
tattgtctatgagggaatgtttcgatctggagtgaagttacacagcgtct
caatctgtgaactgtagagagcaaatatgcattgcttgtaaataactgtg
ttttaacatgctatgggagcacaaggagtctataaagcataagacatcta
tggggttgaccctagctttgattcctaccagttggggatacagagactga
agtggacatcttctatagccacacaggacttccagtggagggagggggac
accaacccacatacaaaacctttgacctaaaatttgtcctgcctccaaga
tacacagggattaaagatggagcagagattgagggaacagccaaccaatg
actgccccagcttgagacccatcccatgtgagagaagcagcccctgacac
tattaatgacactctgctatgcttgcaggcagaagcctagcataactgtc
tcctgagaggcttcatccagcatcggatggaaacagatgcagagacccac
agccaaacatcaggtggagcttgggaagtcttgtggaagagcagggatgg
gattgagtgacctggagggatcaaggacatgaaagaagacctacagagtc
aactaatctgggcccatggggtgctcacagagactgaaacaccaaccaaa
gagcatacagaggctgatctaggaccttacacactgtagcaaatatgtag
cctgtcttcgtgtagttcctaacatgaggtgggggctgtcctctgctctc
tgctgccactgcatccatccttagctgactgcctgatggcctcatgggga
aaggaattgagaccttatagatcctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_82103694_82104209
seq2: B6Ng01-296M21.b_47_562

seq1  GAATTCCAGGGGTCTAGTGGGGCAACTGGTCTTTCATGCAGAGGGCTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGGTCTAGTGGGGCAACTGGTCTTTCATGCAGAGGGCTTCA  50

seq1  ATCATGCATAGGAATACCAAGAGAGAAGGAGAGTGACAGAGAAAGGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGCATAGGAATACCAAGAGAGAAGGAGAGTGACAGAGAAAGGCAGA  100

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  150

seq1  GAAGATGCATTAGACAAGGGGCATGGGGGGATGGGGGCAGGAGAGAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGCATTAGACAAGGGGCATGGGGGGATGGGGGCAGGAGAGAGAAG  200

seq1  GGGTGTCACTTAGAAAGTTCAAGTGCTGTGAAGCTTCTAGCTTGAGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCACTTAGAAAGTTCAAGTGCTGTGAAGCTTCTAGCTTGAGGGGA  250

seq1  AAAAAGACAATAAAACCAAGCAACCGCTGGCTGTCCACCACACAAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACAATAAAACCAAGCAACCGCTGGCTGTCCACCACACAAAGAAG  300

seq1  TCAATACTTTGACACCAAGGTTTTTTTTAAGAAAGTAAAAGCTTTTGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACTTTGACACCAAGGTTTTTTTTAAGAAAGTAAAAGCTTTTGTTG  350

seq1  CAGGCTAAATGTACACCCCAAATTTGTCAGGCTTCTCCTTACAGGGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAAATGTACACCCCAAATTTGTCAGGCTTCTCCTTACAGGGAGAA  400

seq1  GGGGTGGCAATAGTGGGAAGTTTGGGGTGTCTTTGCACAGGCACAATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGCAATAGTGGGAAGTTTGGGGTGTCTTTGCACAGGCACAATCCA  450

seq1  GATACTTCTAATATAGCATCTAGTGTCTCTCCTTCCCTCCCCCACACCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTCTAATATAGCATCTAGTGTCTCTCCTTCCCTCCCCCACACCCC  500

seq1  CGGAGGGGGGGGGGGG  516
      ||||||||||||||||
seq2  CGGAGGGGGGGGGGGG  516