BAC Information

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BAC

Clone NameB6Ng01-296P24
Chromosome3 (Build37)
Map Location 29,094,379 - 29,095,247
singlet/doubletsinglet
Overlap gene6130401L20Rik
Upstream geneTnik, Slc2a2, EG624446, Eif5a2, Rpl22l1, Gm1527
Downstream geneLOC100040676, Evi1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296P24.bB6Ng01-296P24.g
ACCGA092469GA092470
length8541,173
definitionB6Ng01-296P24.b B6Ng01-296P24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccacttaaatgacctgatatgggcactcctgggtttaaggtc
tccaagcaggtagaacatgacttgctgtgtgaactttcagttatagatgt
caaacagtttttgttgttgttgttgctgttactgtcatttaaaaaaaatg
gatgttgggaacaatggcatatccgagctgtgcagtattggctagctgga
catgaggtagaattgtaggctagtttgttgccattcttcagttggaacca
tactttggtttatggacccaaatgactccaaggatcaatgaacaagactt
aacgtttagcacatgctagagttttatcatttttgcttgtgatgtgtatt
ataagcaagggggaaaaatctgtgtttctcttgactactgggagattcca
gttgtttaaaaaaaaaaagcaaccctcaaacctatcacatataatacaag
ccaactgtctaaacatgagctgacttttcagtgtgtgaaaaggattttag
aatgctttaagacttcaaagagaaatgatgaaggagatctcccttccttg
gccctgttcagccctttcccttattctgtttggcttttcatcaagtatgt
attaatagccctaatttcaaagcctgcgttttcattataaatggtttcta
aaatttctcctaaatggaaagttgatgcttttgaaatcagtgcttttata
ttaacatgaatatgggcgaatgctgaaacagttgagcatgcactctgaga
atgcagcaactttgagttattatgtatctgattaaagtttgagtttcgag
ggggacaggtccagtataattaccacctggtagctaccgtctgtgttgac
ttgt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacag
cagatgctggcatggatgtggagaaagaggaacactcctccattgttggt
gggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaactggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacctaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtgctactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
agaaactcacacaatatgtactcactgataagtggatattagccccaaac
ctaggatacccaagatataagatataatttgctaaacacatgaaactgaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccaggaatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggattctcacagtcagctattggatggatcataggctccca
atggaggagctagagaaagtagccaagagcttaaaggatctgcaccctat
agtggacaacattatgactaccagtaccccggagctcttgactctagctg
catatatatcaaaaatgactagtcggcatcactggagaggtcccattgaa
catgcaacctttaattgctcagtaccgcgacgctcaaggtctaaaaatgg
ggtatgtgagtggtgcacaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_29094379_29095247
seq2: B6Ng01-296P24.b_50_903

seq1  GAATTCTTCCACTTAAATGACCTGATATGGGCACTCCTGGGTTTAAGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCACTTAAATGACCTGATATGGGCACTCCTGGGTTTAAGGTC  50

seq1  TCCAAGCAGGTAGAACATGACTTGCTGTGTGAACTTTCAGTTATAGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCAGGTAGAACATGACTTGCTGTGTGAACTTTCAGTTATAGATGT  100

seq1  CAAACAGTTTTTGTTGTTGTTGTTGCTGTTACTGTCATTTAAAAAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGTTTTTGTTGTTGTTGTTGCTGTTACTGTCATTTAAAAAAAATG  150

seq1  GATGTTGGGAACAATGGCATATCCGAGCTGTGCAGTATTGGCTAGCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGGGAACAATGGCATATCCGAGCTGTGCAGTATTGGCTAGCTGGA  200

seq1  CATGAGGTAGAATTGTAGGCTAGTTTGTTGCCATTCTTCAGTTGGAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGTAGAATTGTAGGCTAGTTTGTTGCCATTCTTCAGTTGGAACCA  250

seq1  TACTTTGGTTTATGGACCCAAATGACTCCAAGGATCAATGAACAAGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGGTTTATGGACCCAAATGACTCCAAGGATCAATGAACAAGACTT  300

seq1  AACGTTTAGCACATGCTAGAGTTTTATCATTTTTGCTTGTGATGTGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTTAGCACATGCTAGAGTTTTATCATTTTTGCTTGTGATGTGTATT  350

seq1  ATAAGCAAGGGGGAAAAATCTGTGTTTCTCTTGACTACTGGGAGATTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAAGGGGGAAAAATCTGTGTTTCTCTTGACTACTGGGAGATTCCA  400

seq1  GTTGTTTAAAAAAAAAAAGCAACCCTCAAACCTATCACATATAATACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTAAAAAAAAAAAGCAACCCTCAAACCTATCACATATAATACAAG  450

seq1  CCAACTGTCTAAACATGAGCTGACTTTTCAGTGTGTGAAAAGGATTTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGTCTAAACATGAGCTGACTTTTCAGTGTGTGAAAAGGATTTTAG  500

seq1  AATGCTTTAAGACTTCAAAGAGAAATGATGAAGGAGATCTCCCTTCCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTAAGACTTCAAAGAGAAATGATGAAGGAGATCTCCCTTCCTTG  550

seq1  GCCCTGTTCAGCCCTTTCCCTTATTCTGTTTGGCTTTTCATCAAGTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTTCAGCCCTTTCCCTTATTCTGTTTGGCTTTTCATCAAGTATGT  600

seq1  ATTAATAGCCCTAATTTCAAAGCCTGCGTTTTCATTATAAATGGTTTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAGCCCTAATTTCAAAGCCTGCGTTTTCATTATAAATGGTTTCTA  650

seq1  AAATTTCTCCTAAATGGAAAGTTGATGCTTTTGAAATCAGTGCTTTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAATTTCTCCTAAATGGAAAGTTGATGCTTTTGAAATCAGTGCTTTT-AT  699

seq1  ATTAACATGAATATGGGCGAATGCTGAAACAGTTGAGCAATGCACTCTGA  750
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTAACATGAATATGGGCGAATGCTGAAACAGTTGAGC-ATGCACTCTGA  748

seq1  GAAATGCAGCAACTTTGAAGTTATTATGTATCTGAATTTAAAAGTTTGAG  800
      | ||||||||||||||| |||||||||||||||||   | ||||||||||
seq2  G-AATGCAGCAACTTTG-AGTTATTATGTATCTGA---TTAAAGTTTGAG  793

seq1  TTTCAGAGGGAGACAGGTCCAGGTATAAATTTACCACCTGGGTAAGCTAC  850
      |||| ||||| |||||||||| ||||||  |||||||||||   ||||||
seq2  TTTC-GAGGGGGACAGGTCCA-GTATAA--TTACCACCTGG--TAGCTAC  837

seq1  CGTCTGTGTTTGAACTTGT  869
      ||||||||||   ||||||
seq2  CGTCTGTGTT--GACTTGT  854