BAC Information

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BAC

Clone NameB6Ng01-297A12
Chromosome3 (Build37)
Map Location 7,694,687 - 7,695,783
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr289-ps1, EG667801, Pkia, LOC667807, 3110050N22Rik, Il7
Downstream geneLOC620822, LOC633072, LOC545500, LOC620966, Stmn2, Hey1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297A12.bB6Ng01-297A12.g
ACCGA092493GA092494
length1,2251,093
definitionB6Ng01-297A12.b B6Ng01-297A12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggttttggattttg
tcaaatgctttctctgcatctaaagagatgatcatgtggtttttgtcttt
gagtttgcttatatattggattacgttggtggatttctgaagattgaacc
atcccagcatccctgggatgaaacctacttggtcaggatgggtgattgtt
ttgatgtgttcttggattctgttagcaagaactttattgaggatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttgggt
cttttcatggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagtaccttctgtttctattttgtggaatagtttgtgcagaactgg
aattaggtcttcattgaaggtctgatagaactctgcactaaacccatctg
gtcctgggtatttttggttgggagactattaatgactgcttctatttctt
taggggatataggactgtttagatcattaacctgatcttgatttagcttt
ggtacctggtatctgtctagaaacttgtccatttcatccaggttctccag
ttttgttgattatagccttttgtagcaggatttgatggtgttttggattt
cttcaggatctgttgttatgtttcccttttcatttctgattttgttaatt
aggatgctgtccctgtgccctctagtgaatctggctaagggtttatctat
cttgttgattttctcaaagaaccagctccttgattggttgagtctttgaa
tagttcttcgtgtttccacttggttgatttcaccctgagtttgattattt
cctgccctctactcctcttgggtaaatttgcttccttttgttctagagct
tttaggtgttttgtcaagctgctagtgtgtgctctctctactttcttttg
gaggcactcagagttatgagttttcctcttagaatgcttccattgtgtcc
cataagtttggggtatgttgtggcttccttttcattaaactccaaaatgt
ctttaatttctttcttattcttcctgaacaaggattatcatggagaagag
tgtgctcagttttcacgtgaatgttcggtttcatttattcattggtattg
gagaaatcagctagtcaagtggtatctcggtacgaagtgccatggagaca
cgttcacaaaatttttgtagtaatg

gaattctatggcttagttactaaaacagctggtggacttttaagactaaa
actgattcagttcttgtacataccatacatttaaataccattacccaact
taaccacaacaacattaaaatgagagttttgtttctgaagaaagagactc
aatttgatcattatagtttcccagagcctgtgactacaccagggctctgg
aaaagtgccacaaatccatgtttcagaatggagtgaattaatgaatggca
atatctctatgaaaaatggcttatcataattgccattggaaaaatagaaa
gcatggaagtggtgatgtgacttaattaatacacataaaataaatagtag
ttgaaataaaatgagctcacacgttactcagttccttctatattttaatg
agatattgctctagccaattagacttgggaatgactttcattttacaaat
aactattcaaaatctggaagcagaggaaccaatctttacaaaactcacag
cagacaagcatcaatgagaacaataactaaaacctttagcaagaattctg
tggttagaaatgaaatgtaagtgctccaagaaatttcaaacgcatgtaat
gaatatccttagaaagtgaattttaggcaatgaagaaatagctcaggact
gaagagcaatggctcctcttccagagaacctgggttcagttcccagcact
ctcatgctagcccacaaccatccgtacctccacttccaagggaatctgat
gccctctttggcatccacaaattgaaaaggacgcacagacatacatgccg
agaaaacacccatacacacaaaatgaaacacatgaaacttatttaataaa
aagaaaaaataaaaatttaaaacagtaagtgcagtttcacacaggatggt
actcataattctgagcacttgaatagtctttgtctggtgagagctggctt
tcatcattgaagcagttatcatctctcctatgactgaatattttactctg
ttttcttgtcacagagtatgatgacccacgaattaaaactgctaaaagtt
tataatattttatataaagtaagtagaaatattgtcttgattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_7694687_7695783
seq2: B6Ng01-297A12.g_67_1159

seq1  GAATTCTATGGCTTAGTTACTAAAACAGCTGGTGGACTTTTAAGACTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGGCTTAGTTACTAAAACAGCTGGTGGACTTTTAAGACTAAA  50

seq1  ACTGATTCAGTTCTTGTACATACCATACATTTAAATACCATTACCCAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTCAGTTCTTGTACATACCATACATTTAAATACCATTACCCAACT  100

seq1  TAACCACAACAACATTAAAATGAGAGTTTTGTTTCTGAAGAAAGAGACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACAACAACATTAAAATGAGAGTTTTGTTTCTGAAGAAAGAGACTC  150

seq1  AATTTGATCATTATAGTTTCCCAGAGCCTGTGACTACACCAGGGCTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGATCATTATAGTTTCCCAGAGCCTGTGACTACACCAGGGCTCTGG  200

seq1  AAAAGTGCCACAAATCCATGTTTCAGAATGGAGTGAATTAATGAATGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGCCACAAATCCATGTTTCAGAATGGAGTGAATTAATGAATGGCA  250

seq1  ATATCTCTATGAAAAATGGCTTATCATAATTGCCATTGGAAAAATAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCTATGAAAAATGGCTTATCATAATTGCCATTGGAAAAATAGAAA  300

seq1  GCATGGAAGTGGTGATGTGACTTAATTAATACACATAAAATAAATAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGAAGTGGTGATGTGACTTAATTAATACACATAAAATAAATAGTAG  350

seq1  TTGAAATAAAATGAGCTCACACGTTACTCAGTTCCTTCTATATTTTAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATAAAATGAGCTCACACGTTACTCAGTTCCTTCTATATTTTAATG  400

seq1  AGATATTGCTCTAGCCAATTAGACTTGGGAATGACTTTCATTTTACAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTGCTCTAGCCAATTAGACTTGGGAATGACTTTCATTTTACAAAT  450

seq1  AACTATTCAAAATCTGGAAGCAGAGGAACCAATCTTTACAAAACTCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCAAAATCTGGAAGCAGAGGAACCAATCTTTACAAAACTCACAG  500

seq1  CAGACAAGCATCAATGAGAACAATAACTAAAACCTTTAGCAAGAATTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAGCATCAATGAGAACAATAACTAAAACCTTTAGCAAGAATTCTG  550

seq1  TGGTTAGAAATGAAATGTAAGTGCTCCAAGAAATTTCAAACGCATGTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAGAAATGAAATGTAAGTGCTCCAAGAAATTTCAAACGCATGTAAT  600

seq1  GAATATCCTTAGAAAGTGAATTTTAGGCAATGAAGAAATAGCTCAGGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCCTTAGAAAGTGAATTTTAGGCAATGAAGAAATAGCTCAGGACT  650

seq1  GAAGAGCAATGGCTCCTCTTCCAGAGAACCTGGGTTCAGTTCCCAGCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCAATGGCTCCTCTTCCAGAGAACCTGGGTTCAGTTCCCAGCACT  700

seq1  CTCATGCTAGCCCACAACCATCCGTACCTCCACTTCCAAGGGAATCTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCTAGCCCACAACCATCCGTACCTCCACTTCCAAGGGAATCTGAT  750

seq1  GCCCTCTTTGGCATCCACAAATTGAAAAGGACGCACAGACATACATGCCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTTTGGCATCCACAAATTGAAAAGGACGCACAGACATACATGCCG  800

seq1  AGAAAACACCCATACACACAAAATGAAACACATGAAACTTATTTAATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACACCCATACACACAAAATGAAACACATGAAACTTATTTAATAAA  850

seq1  AAGAAAAA--TAAAATTTAAAACAGTAAGTGCAGTTTCACACAGGATGGT  898
      ||||||||   |||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAATAAAAATTTAAAACAGTAAGTGCAGTTTCACACAGGATGGT  900

seq1  ACTCATAATTCTGAGCACTTGAATAGTCTTTGTCTGGTGAGAGCTGGCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAATTCTGAGCACTTGAATAGTCTTTGTCTGGTGAGAGCTGGCTT  950

seq1  TCATCATTGAAGCAGTTATCATTCTCTTCCTATGACTGAATATTTTACTC  998
      ||||||||||||||||||||| |||| |||||||||||||||||||||||
seq2  TCATCATTGAAGCAGTTATCA-TCTC-TCCTATGACTGAATATTTTACTC  998

seq1  TGTTTTCCTTGTCACAGAGTATGATGACCACAGATATAAAAACTGGCTAA  1048
      |||||| |||||||||||||||||||||| ||   || |||||| |||||
seq2  TGTTTT-CTTGTCACAGAGTATGATGACC-CACGAATTAAAACT-GCTAA  1045

seq1  AAGGTTAT-ATATTTTATATAAAATTAAAAATTAG-AATA-TGTCTTGAT  1095
      ||| |||| |||||||||||||| |    || ||| |||| |||||||||
seq2  AAGTTTATAATATTTTATATAAAGT----AAGTAGAAATATTGTCTTGAT  1091

seq1  TG  1097
      ||
seq2  TG  1093


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