BAC Information

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BAC

Clone NameB6Ng01-297I09
Chromosome3 (Build37)
Map Location 67,121,931 - 67,123,043
singlet/doubletsinglet
Overlap geneRsrc1
Upstream geneLOC625115, Shox2
Downstream geneMlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412, EG208426, EG545531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297I09.bB6Ng01-297I09.g
ACCGA092860GA092861
length1,2161,111
definitionB6Ng01-297I09.b B6Ng01-297I09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccacattcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtatgttggtggtct
ttttgtcttattggtggtgtcttttgccttacagaagatttgcagtttca
tgaggtcccatttattgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggctttcccccac
tttctcctctataagtttcagtgcctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagattggaatggatcgatttgc
attcttctacatgataaccagttgtaataccaccatttgttgaaaatgct
gtccttcttccactggatggttttagctcccttgtcgaagatcaagtgac
cataggtgtgtgggttcatttctgggtcttcaattctattccattggtct
acttgtctgtctctataccagtaccatgcagtttttaccacaattgctct
gtagtaaagctttaggtcaggcatggtgattccaccagaggttcttttat
ccttgagaagagtttttgctatcctaggttttttgttattccagatgaat
ttgcaaattgctccttctaattcgttgaagaattgagttggaattttgat
ggggattgcattgaatctgtagattgcttttggcaagatagccattttta
caatgttgatcctgccaatccatgagcatgggagatctttccatctttct
gagatcttctttaatatctttcttcagagacttgaagttcttatcatata
gatctttcacttccttagttagagtcacgccaagatattttatattattt
gtgactattgagaaggtgttgtttccctaatttctttctcagcctgttta
ttctttgtgtagagaaggccattgacttgttgagttaattttatattctg
ctacctcaccggaagcagttatcaaggttaggagtctctggtgaatttaa
ggttcacttatattatactatcaatcatcctgcaaggggaaattgacttc
ctttctcattggatctgaatcctagtggcatgctcggcagacctcaagta
caatgttaaaaggtgt
tatcccaggctccagagcaggttcaaaggcaggttggtctacatgagacc
atgtcttttaaaagcctgcctaaaatgtactaaatgcctgtcagaacatg
agtgggaggtgggggtcaaaaggactaagagtgccttaatgcaaagatgc
cttagaagcgctattttttaatgtttgaatttcattgctatgaatagttg
tacatatttatgaagtacaatttaatatttccatacttgtatgtatttat
ggtttatgattgtgatgaatatttttgtgtatacacacccattgagtagt
agaatttgaagtttcacaatacttctggtgaacaatatattatgttcaaa
gatgtggatatcaacagctctaagttcaaagattcgaacaaatcatctga
tgtgaagtttaagaaatgctctaaccagttgtttctcatgtctgtgtctt
tttagatctgatcatgagtgatatataattacaaataggtataactttga
aagagcacgtttaataactataagatgtgataatgtgagtattctgagga
taccttcacagatccttcttatacttagaattatatacttcttatacttg
atacttagaattgtgtatcgtaatcagccatcatagacttccttatctaa
atcttattattttattgtactgttttatcatttgatctcactactgtgac
atgccatgttcagctcagataaatgactctggttatgagtgacaagacaa
agttgttcaattaccgctaaagtatattgggaattatacacattaaggaa
agctctttctgatattggagtatcatgatgtttttagaaactaacaaatt
gtcctttgtaaaaataaaattcctaattatttttaaataataaaatttag
ttttgacagatgaaggaggcattgacatattaacttctgctgttaaatat
gtagcttatttctaactatgttagcccagagatggagtcttctctgttaa
cactttctaaagtacagttacattccctgcctttatctattgctattgaa
gacattagccttatttggccctagcatgatttcaatgtatgaagtcatgc
cagctgactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67121931_67123043
seq2: B6Ng01-297I09.g_79_1189

seq1  TATCCCAGGCTCCAGAGCAGGTTCAAAGGCAGGTTGGTCTACATGAGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAGGCTCCAGAGCAGGTTCAAAGGCAGGTTGGTCTACATGAGACC  50

seq1  ATGTCTTTTAAAAGCCTGCCTAAAATGTACTAAATGCCTGTCAGAACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTTAAAAGCCTGCCTAAAATGTACTAAATGCCTGTCAGAACATG  100

seq1  AGTGGGAGGTGGGGGTCAAAAGGACTAAGAGTGCCTTAATGCAAAGATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAGGTGGGGGTCAAAAGGACTAAGAGTGCCTTAATGCAAAGATGC  150

seq1  CTTAGAAGCGCTATTTTTTAATGTTTGAATTTCATTGCTATGAATAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAGCGCTATTTTTTAATGTTTGAATTTCATTGCTATGAATAGTTG  200

seq1  TACATATTTATGAAGTACAATTTAATATTTCCATACTTGTATGTATTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTTATGAAGTACAATTTAATATTTCCATACTTGTATGTATTTAT  250

seq1  GGTTTATGATTGTGATGAATATTTTTGTGTATACACACCCATTGAGTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATGATTGTGATGAATATTTTTGTGTATACACACCCATTGAGTAGT  300

seq1  AGAATTTGAAGTTTCACAATACTTCTGGTGAACAATATATTATGTTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTGAAGTTTCACAATACTTCTGGTGAACAATATATTATGTTCAAA  350

seq1  GATGTGGATATCAACAGCTCTAAGTTCAAAGATTCGAACAAATCATCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGATATCAACAGCTCTAAGTTCAAAGATTCGAACAAATCATCTGA  400

seq1  TGTGAAGTTTAAGAAATGCTCTAACCAGTTGTTTCTCATGTCTGTGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGTTTAAGAAATGCTCTAACCAGTTGTTTCTCATGTCTGTGTCTT  450

seq1  TTTAGATCTGATCATGAGTGATATATAATTACAAATAGGTATAACTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATCTGATCATGAGTGATATATAATTACAAATAGGTATAACTTTGA  500

seq1  AAGAGCACGTTTAATAACTATAAGATGTGATAATGTGAGTATTCTGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACGTTTAATAACTATAAGATGTGATAATGTGAGTATTCTGAGGA  550

seq1  TACCTTCACAGATCCTTCTTATACTTAGAATTATATACTTCTTATACTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCACAGATCCTTCTTATACTTAGAATTATATACTTCTTATACTTG  600

seq1  ATACTTAGAATTGTGTATCGTAATCAGCCATCATAGACTTCCTTATCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAGAATTGTGTATCGTAATCAGCCATCATAGACTTCCTTATCTAA  650

seq1  ATCTTATTATTTTATTGTACTGTTTTATCATTTGATCTCACTACTGTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATTATTTTATTGTACTGTTTTATCATTTGATCTCACTACTGTGAC  700

seq1  ATGCCATGTTCAGCTCAGATAAATGACTCTGGTTATGAGTGACAAGACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATGTTCAGCTCAGATAAATGACTCTGGTTATGAGTGACAAGACAA  750

seq1  AGTTGTTCAATTACCGCTAAAGTATATTGGGAATTATACACATTAAGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTCAATTACCGCTAAAGTATATTGGGAATTATACACATTAAGGAA  800

seq1  AGCTC-TTCTGATATTGGAGTATCATGATGTTTTTAGAAACTAACAAATT  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTTCTGATATTGGAGTATCATGATGTTTTTAGAAACTAACAAATT  850

seq1  GTCCTTTGTAAAAATAAAATTCCTAATAATTTTTAAAATAAATAAAATTT  899
      ||||||||||||||||||||||||||| |||||||||   ||||||||||
seq2  GTCCTTTGTAAAAATAAAATTCCTAATTATTTTTAAA--TAATAAAATTT  898

seq1  AGTTTTGACAGATGAAAGAGGCCATTGACATATTAACTTCTGCTGTTAAA  949
      |||||||||||||||| |||| ||||||||||||||||||||||||||||
seq2  AGTTTTGACAGATGAAGGAGG-CATTGACATATTAACTTCTGCTGTTAAA  947

seq1  TATGTAGCTTATTTCTAACTATGTTAAGCCAGGAGAT-GAGTC-TCTCTG  997
      ||||||||||||||||||||||||| ||||  ||||| ||||| ||||||
seq2  TATGTAGCTTATTTCTAACTATGTT-AGCCCAGAGATGGAGTCTTCTCTG  996

seq1  TTTAACACTTCTTAAAGTACAAGTTAACAT--CCTGCCTTTATCTAATTG  1045
       |||||||||  |||||||| |||| ||||  ||||||||||||| ||||
seq2  -TTAACACTTTCTAAAGTAC-AGTT-ACATTCCCTGCCTTTATCT-ATTG  1042

seq1  CTATGAAAGACATTAGCC-TATTTGGCTCTAGCATGATTCAATTGTATGA  1094
      ||||  |||||||||||| |||||||| |||||||||||  | |||||||
seq2  CTATTGAAGACATTAGCCTTATTTGGCCCTAGCATGATTTCAATGTATGA  1092

seq1  GGTCATGCAGCCTGACTAT  1113
       |||||||   ||||||||
seq2  AGTCATGCCAGCTGACTAT  1111