BAC Information

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BAC

Clone NameB6Ng01-297L01
Chromosome3 (Build37)
Map Location 84,677,566 - 84,678,744
singlet/doubletsinglet
Overlap genenone
Upstream geneD930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik, Arfip1, EG667788, EG627369, Tigd4, Tmem154
Downstream geneLOC624889, Fbxw7, Dear1, LOC100042237, LOC100042125, Pet112l, 9930021J17Rik, Glt28d2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297L01.bB6Ng01-297L01.g
ACCGA092988GA092989
length3171,157
definitionB6Ng01-297L01.b B6Ng01-297L01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttcaacaagtatgttgacgtgattatacacacagcaagaaactaatgtta
aatccctatctcacagcacacacaaaatcaactcaaaaaggatcatagac
ctacaggttaccgctatagaactctcagaagaaaacctgagtgtaaatct
tgatgattctgagttccaaaatgctttcatagatgtgacaggaaatgaac
aggagggaggaggagagagttgggaaagagggagagagggtgaagagatg
gaggagtggacagggttagaaattttttattggagttcacctgcatttaa
aaattttgtgctattgt
gaattcactttgtagaccagggtggcctcgaactcagaaatccgcctgcc
tctgcctcccgagtgcagggattaaaggcgtgcgccactacgcccggtgt
ggatcttttattttaggcctttgtagaagcagtagtgatgctgaggctgg
tcagatacctggctttcattgagagcagcatatatttgctggggacttta
aattgattcttgctttattttgtacacagtgatgtatgttctgagcatat
tctgtacttattggcggagtaaattatgttagatgttaatgcttggtacc
tgttcttacactagcacaatactttatttatttatttatttatttattta
tttattttaccttctttagctcccctacttcccatatttgctagagaggt
ttattagcagcagttaagactgtaccctaatgtctctgatgagcatctca
aaaggtagcaacatggctaaagcttgcttttacaagttctgttgataaat
cattttagacacttagtctgatagtcccttgcattttccatgtactgtgt
tctttggcttgtctggcagcagcacaggaaggtagacttaacggcagtcc
agctcaaatgcatctacagatgagaatttatcttctgtttagcatacagt
gttttcagcaggcgagtacgatgttactgaattattttgcttgtttcttt
ctacagtcgttatttatagaacttttttccccccttgtgaagtacatgcc
tgtttctaggtattctgaaaaaactgatttaagtataacatgagttaagt
ctagaaggacagtgcaaggtgaaggcagaaagagtactgactctttttag
ctctaaagcaaggaaagggactgagcgtgggaagggactgagcgtgacta
cacacacacacacacacacacacacacacacacacacacacgcagagcag
ggaagggactgaatgtgagacacacacatacacagagctttcaatgctca
acataggctctctatagaggatttgttatttttagttccttttctttcta
aaggttattaaaaagagtgactcattgctattggatgttcattaaatatt
tgatatgattattaagaagactaactgttgatttagtgactctaattcct
ggaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_84677566_84678744
seq2: B6Ng01-297L01.g_66_1222

seq1  GAATTCACTTTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCGCCTGCC  50

seq1  TCTGCCTCCCGAGTGCAGGGATTAAAGGCGTGCGCCACTACGCCCGGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCGAGTGCAGGGATTAAAGGCGTGCGCCACTACGCCCGGTGT  100

seq1  GGATCTTTTATTTTAGGCCTTTGTAGAAGCAGTAGTGATGCTGAGGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTTATTTTAGGCCTTTGTAGAAGCAGTAGTGATGCTGAGGCTGG  150

seq1  TCAGATACCTGGCTTTCATTGAGAGCAGCATATATTTGCTGGGGACTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATACCTGGCTTTCATTGAGAGCAGCATATATTTGCTGGGGACTTTA  200

seq1  AATTGATTCTTGCTTTATTTTGTACACAGTGATGTATGTTCTGAGCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATTCTTGCTTTATTTTGTACACAGTGATGTATGTTCTGAGCATAT  250

seq1  TCTGTACTTATTGGCGGAGTAAATTATGTTAGATGTTAATGCTTGGTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACTTATTGGCGGAGTAAATTATGTTAGATGTTAATGCTTGGTACC  300

seq1  TGTTCTTACACTAGCACAATACTTTATTTATTTATTTATTTATTTATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTACACTAGCACAATACTTTATTTATTTATTTATTTATTTATTTA  350

seq1  TTTATTTTACCTTCTTTAGCTCCCCTACTTCCCATATTTGCTAGAGAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTACCTTCTTTAGCTCCCCTACTTCCCATATTTGCTAGAGAGGT  400

seq1  TTATTAGCAGCAGTTAAGACTGTACCCTAATGTCTCTGATGAGCATCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGCAGCAGTTAAGACTGTACCCTAATGTCTCTGATGAGCATCTCA  450

seq1  AAAGGTAGCAACATGGCTAAAGCTTGCTTTTACAAGTTCTGTTGATAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTAGCAACATGGCTAAAGCTTGCTTTTACAAGTTCTGTTGATAAAT  500

seq1  CATTTTAGACACTTAGTCTGATAGTCCCTTGCATTTTCCATGTACTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAGACACTTAGTCTGATAGTCCCTTGCATTTTCCATGTACTGTGT  550

seq1  TCTTTGGCTTGTCTGGCAGCAGCACAGGAAGGTAGACTTAACGGCAGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGCTTGTCTGGCAGCAGCACAGGAAGGTAGACTTAACGGCAGTCC  600

seq1  AGCTCAAATGCATCTACAGATGAGAATTTATCTTCTGTTTAGCATACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAATGCATCTACAGATGAGAATTTATCTTCTGTTTAGCATACAGT  650

seq1  GTTTTCAGCAGGCGAGTACGATGTTACTGAATTATTTTGCTTGTTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGCAGGCGAGTACGATGTTACTGAATTATTTTGCTTGTTTCTTT  700

seq1  CTACAGTCGTTATTTATAGAACTTTTTTCCCCCCTTGTGAAGTACATGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTCGTTATTTATAGAACTTTTTTCCCCCCTTGTGAAGTACATGCC  750

seq1  TGTTTCTAGGTATTCTGAAAAAACTGATTTAAGTATAACATGAGTTAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTAGGTATTCTGAAAAAACTGATTTAAGTATAACATGAGTTAAGT  800

seq1  CTAGAAGGACAGTGCAAGGTGAAGGCAGAAAGAGTACTGACTCTTTTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGGACAGTGCAAGGTGAAGGCAGAAAGAGTACTGACTCTTTTTAG  850

seq1  CTCTAAAGC-AGGGAAGGGACTGAGCGTGGGAAGGGACTGAGCGTGAC-A  898
      ||||||||| ||| |||||||||||||||||||||||||||||||||| |
seq2  CTCTAAAGCAAGGAAAGGGACTGAGCGTGGGAAGGGACTGAGCGTGACTA  900

seq1  CACACACACACACACACACACACACACACACACACACACACGCAGAGCAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACGCAGAGCAG  950

seq1  GGAAGGGACTGAATGTGAGACACACACATACACAGAGCCTTTCAATGCCT  998
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  GGAAGGGACTGAATGTGAGACACACACATACACAGAG-CTTTCAATG-CT  998

seq1  CAAACATAGGCTCTTCTATAGAAGGTATTTTGTTATTTTTAGTTTCCTTT  1048
      | ||||||||||| |||||||| |    ||||||||||||||||  | ||
seq2  C-AACATAGGCTC-TCTATAGAGG---ATTTGTTATTTTTAGTT--CCTT  1041

seq1  TTCTTTTTCTTAAAGGTGTATTAAAAAGAGTTGACATCATTGGTATCTGA  1098
      ||||||    ||||||| |||||||||||| |||| |||||| ||| || 
seq2  TTCTTT---CTAAAGGT-TATTAAAAAGAG-TGAC-TCATTGCTAT-TGG  1084

seq1  ATGTTCATTAAATTATTTTGAATATGATTATTTAAGAAGACTAACATGTT  1148
      |||||||||||| |||||   ||||||||| |||||||||||||| ||||
seq2  ATGTTCATTAAA-TATTT--GATATGATTA-TTAAGAAGACTAAC-TGTT  1129

seq1  TGTATTAATGTGACTCTAATTCTGGGAATTC  1179
         ||| | |||||||||||||  |||||||
seq2  --GATTTA-GTGACTCTAATTCCTGGAATTC  1157