BAC Information

Click to search

BAC

Clone NameB6Ng01-298E08
Chromosome3 (Build37)
Map Location 149,653,870 - 149,655,064
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040368, LOC668893, EG381483, LOC100040620
Downstream geneLOC100040633, LOC100040455, LOC100040463, LOC623554
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298E08.bB6Ng01-298E08.g
ACCGA093423GA093424
length1,1671,162
definitionB6Ng01-298E08.b B6Ng01-298E08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtaagaactttggaagcataatatccaactcagcaaagaaaa
caaagcaagcccaaaatctgctgtgattttcattgatgacatattcatta
aaatttaagaatactggcatcttactaatgttgtctttaactcagccaaa
tattatgttttctatttacttaagttttcataatttccctcagtaaagct
ttgaaggatttagtgttcaaagcttgtatttagattgtaagatttgtgct
taagtactttgcaagtttgatgcaaatgaaaatagccttaaaatacttta
catacaatatattttttctaataatcttgtattttacagccttgataagc
tcatttgttagatttgtttcctctggtaaagagtatgttaaaaattcttt
tgtgtagacaatcctacattttttttttgaataaagcacatctcatttgc
tttctcatctatatgaatgccttcctgttttcattcagatatacagagga
taaatggtgataaactgtatttgtaatactagaaatactaaaaatccttg
tcttgctcttaacctgagttagagaagaatcattagtcttttactaaaca
tacgatgtaattgaaggactttcaaaggctttggatgttcctattttttt
caaacttcaagaggaaaattttcaataatgtatattagatttttattcat
ttgcttttttgataacagatatttttctccatttcaggctagccttgaac
ttgtcatctctgtgcctctcttctggagtgctgacatgtcacgcaggcat
cacttatccattgtaatctatattaaaatttataggctcagacgtttcaa
accctactttagtaagttttctcaaatggttcaacccaccttctagccca
cagtataaaggcagaggagaaagatggtaaacaggacaagggatgcagac
ctgtttagaagtagttctttgggggcaattccagtctccatttgtagata
ccatagcccagtttcaatgtgtcacatcgcaacagcaaaaactgcatgat
cagcagaactgcagactcacatttgacatgagtcagcagggtgacaagac
agccagaatgctgagttctctgctgttactctctcatgaaagtgccacag
ctagctatgccaggcac
gaattctcacctgatgaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcctcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaagtcagtctggaggttcctca
gaaaattagacataatactaccggaagatccagcaatacctctcctgggc
atatatccagaagatgccccaagtggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaacctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtacactcagctattaaaaagaatgtatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccaaaacct
aggatccccaagatataagatacaatttcctaaacacatgaaactcaaga
aaaatgaagactgaagtgtggacactgtgccctccttagaagtgggaaca
aaacacccttggaaggagttacagagacaaagtttggagctgagatgaaa
ggatggaccatgtagagactgccatatccagggatccaccccataatcag
catccaaacgctgacaccattgcatacactagcaagattttatcgaaagg
gacccagatgtagctgtctcttgtgagactatgccggggcctaggaaaca
cagaagtgggatgctcacagtcagctattggatggatcacagagctccca
atggaggagctagagaaagtacccaagagctaaagggatctgcaccctat
agtggatacattatgactaccagtacccgagctcttgactctagctgcat
atgtatcaaagatgactagtcgtcatcactgaaaggagagtcaatgacac
gcactttatatgccagttacagggtacgcccaggtctaaaaagggggaaa
ttggggttggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_149653870_149655064
seq2: B6Ng01-298E08.b_45_1211

seq1  GAATTCCAGTAAGAACTTTGGAAGCATAATATCCAACTCAGCAAAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTAAGAACTTTGGAAGCATAATATCCAACTCAGCAAAGAAAA  50

seq1  CAAAGCAAGCCCAAAATCTGCTGTGATTTTCATTGATGACATATTCATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAAGCCCAAAATCTGCTGTGATTTTCATTGATGACATATTCATTA  100

seq1  AAATTTAAGAATACTGGCATCTTACTAATGTTGTCTTTAACTCAGCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAGAATACTGGCATCTTACTAATGTTGTCTTTAACTCAGCCAAA  150

seq1  TATTATGTTTTCTATTTACTTAAGTTTTCATAATTTCCCTCAGTAAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGTTTTCTATTTACTTAAGTTTTCATAATTTCCCTCAGTAAAGCT  200

seq1  TTGAAGGATTTAGTGTTCAAAGCTTGTATTTAGATTGTAAGATTTGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGATTTAGTGTTCAAAGCTTGTATTTAGATTGTAAGATTTGTGCT  250

seq1  TAAGTACTTTGCAAGTTTGATGCAAATGAAAATAGCCTTAAAATACTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACTTTGCAAGTTTGATGCAAATGAAAATAGCCTTAAAATACTTTA  300

seq1  CATACAATATATTTTTTCTAATAATCTTGTATTTTACAGCCTTGATAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAATATATTTTTTCTAATAATCTTGTATTTTACAGCCTTGATAAGC  350

seq1  TCATTTGTTAGATTTGTTTCCTCTGGTAAAGAGTATGTTAAAAATTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTTAGATTTGTTTCCTCTGGTAAAGAGTATGTTAAAAATTCTTT  400

seq1  TGTGTAGACAATCCTACATTTTTTTTTTGAATAAAGCACATCTCATTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGACAATCCTACATTTTTTTTTTGAATAAAGCACATCTCATTTGC  450

seq1  TTTCTCATCTATATGAATGCCTTCCTGTTTTCATTCAGATATACAGAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATCTATATGAATGCCTTCCTGTTTTCATTCAGATATACAGAGGA  500

seq1  TAAATGGTGATAAACTGTATTTGTAATACTAGAAATACTAAAAATCCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGTGATAAACTGTATTTGTAATACTAGAAATACTAAAAATCCTTG  550

seq1  TCTTGCTCTTAACCTGAGTTAGAGAAGAATCATTAGTCTTTTACTAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTCTTAACCTGAGTTAGAGAAGAATCATTAGTCTTTTACTAAACA  600

seq1  TACGATGTAATTGAAGGACTTTCAAAGGCTTTGGATGTTCCTATTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGATGTAATTGAAGGACTTTCAAAGGCTTTGGATGTTCCTATTTTTTT  650

seq1  CAAACTTCAAGAGGAAAATTTTCAATAATGTATATTAGATTTTTATTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTCAAGAGGAAAATTTTCAATAATGTATATTAGATTTTTATTCAT  700

seq1  TTGCTTTTTTGATAACAGATATTTTTCTCCATTTCAGGCTAGCCTTGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTTTGATAACAGATATTTTTCTCCATTTCAGGCTAGCCTTGAAC  750

seq1  TTGTCATCTCTGTGCCTCTCTTCTGGAGTGCTGACATGTCAGGCAGGCAT  800
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTGTCATCTCTGTGCCTCTCTTCTGGAGTGCTGACATGTCACGCAGGCAT  800

seq1  CACTTATCCATTGTAATCTATATTAAAATTTATAGGCTCAGACGTTTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATCCATTGTAATCTATATTAAAATTTATAGGCTCAGACGTTTCAA  850

seq1  ACCCTACTTTAGTAAGTTTTCTCAAATGGTTCAACCCACCTTCTAGCCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACTTTAGTAAGTTTTCTCAAATGGTTCAACCCACCTTCTAGCCCA  900

seq1  CAGTATAAAGGCAGAGGAGAAAAGATGGTAAACAGGACAAGGGGATGCAG  950
      ||||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  CAGTATAAAGGCAGAGGAG-AAAGATGGTAAACAGGACAA-GGGATGCAG  948

seq1  ACCTGTTTAGAAGTAGTTCTTT-GGGGCAATTCCAGTCTCCATTTGTTAG  999
      |||||||||||||||||||||| ||||||||||||||||||||||||   
seq2  ACCTGTTTAGAAGTAGTTCTTTGGGGGCAATTCCAGTCTCCATTTGT--A  996

seq1  GATACCAATAGCCCAGTTCAAATGTGTCACCAACCGCAAACCAGCAAAAA  1049
      |||||| |||||||||||  ||||||||||  | |||||  |||||||||
seq2  GATACC-ATAGCCCAGTTTCAATGTGTCAC--ATCGCAA--CAGCAAAAA  1041

seq1  CTGCATGATCCAGCAGAAACTGCCAGGACTCCACCAATTTGACATGAGTC  1099
      ||||||||| |||||| ||||||   |||| |||  ||||||||||||||
seq2  CTGCATGAT-CAGCAG-AACTGC--AGACT-CAC--ATTTGACATGAGTC  1084

seq1  AGCAGGGGTGACCAGGACCAGCCAGAATGCCAGAGTTCTCTGCTGTGACT  1149
      |||| ||||||| ||   ||||||||||| | |||||||||||||| |||
seq2  AGCA-GGGTGACAAG--ACAGCCAGAATG-CTGAGTTCTCTGCTGTTACT  1130

seq1  CTCTCAATGAAGAGTTGCACAGCTAGCTATGCAAGCACCCAGGCAC  1195
      ||||| ||||| |||  ||||||||||||||       ||||||||
seq2  CTCTC-ATGAA-AGTGCCACAGCTAGCTATG-------CCAGGCAC  1167