BAC Information

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BAC

Clone NameB6Ng01-298J15
Chromosome3 (Build37)
Map Location 80,053,353 - 80,053,848
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik, Rxfp1, Tmem144, 1110032E23Rik
Downstream geneEG626797, Gria2, Glrb, EG626841, Pdgfc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298J15.bB6Ng01-298J15.g
ACCGA093666GA093667
length1,202489
definitionB6Ng01-298J15.b B6Ng01-298J15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtagcattatccttctggctggggggagggaagcttggtcgtg
tgcaggcagacatggtactggagaagtagctgagagttctacttctggtt
ccacagttagcaggaagagagagtgacactgggtctgccttgaacatttg
aaacctcaaagttcacccacaatggcacacttctagcaaggctatacttc
ttggtaatgccactttctatcagcctatgggagccattttcattcaaacc
atcacactcatcatttactttgttagttaggcatacctctgaagttttgg
ttgacttcctaagtttttcatttctaattttcccttggtttgggttttct
ttagtgcttctatttctacttttatgtctggaattattttcatcatatca
ttccaatgggttcatgttttcacatacttcactaaaggccctcttaatat
cttcttgaaggtccttgaacattgtcttagtcagagttaccattgttgtg
atgaaacaacatgaccaaagaaacttgggggaggaaaggatctatttggc
ttacccttccatactgtagtccatcattaaaggtagcctattgggcttac
ccttccatactgtagtccatcattaaaggtaaccaagacaagaactaaaa
caggacagaaacctgaaggcagaagatgatgcagagtccatggagggaca
ctacttacttacttgttcccacggcttgctcatcctgttttcttgtagaa
ccatcgcagaaaggccaccagcccctattgattgctaattaagaaaatgc
cttataagctcatgcacagctcagtcttatgaaagaatttttaagataga
gtttacctcctctcagacgacttttgcttgtatcaagttgacataaaact
accaggcacaagctactttaaagtctttgttttgtatttcagctgaattg
catttctcagatgcactatagtagaatgtctggatctgtgaagtattttt
tatgcagatgtctaggcattggtattgaaattatatgatgtgggtgttat
ttttttgtcgtgtttctcttgtacacctctgaaatctaaggctctgtcgt
gattgtatgttgcctgaaggaagtgcatcttgagtctctgcttgaatgct
tacgggttccaggttagaaatgctctcccgtgtgattgtgaatactcatt
gt
cagcagagtagacatgcctccttgaactggctgtccatgagacaaacatg
caaatagaaattcagggatgatttctgtaagccaggcctaaagcaaaatg
tttacttctctgggaggctttaccctttagtctaagatctacaattaatc
aaatgaggggtgtgtgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtg
tgtctgtgtgtgtctgtgtgtgtctgtgtgtgcctttgtgtctgtgtgtg
tatgtctgtgtgtctgtctgtgtctgtctgtgtgtgtgtctgtgaaagag
gaagggagagagagagaaagagagagagagagagtgagagagagagagag
agagagagagaggttgcatgcatacacacccactgatgataacattttgt
tttaaatcaaataattttcacttctacaaatgcttatcaccacaaagccc
ctatataatttaatgtaaaagtttaacaatcacagatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_80053353_80053848
seq2: B6Ng01-298J15.g_67_561 (reverse)

seq1  TCATCTGTGATTATTAAACTTTTACATTAACTTATGTAGGTGGCTTTGTG  50
      |||||||||||| ||||||||||||||||| |||| |||| |||||||||
seq2  TCATCTGTGATTGTTAAACTTTTACATTAAATTATATAGG-GGCTTTGTG  49

seq1  GTGATAAGCATTTGTAGAAGTGATAATTATTTGATTTAAAACAAAATGTT  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTGATAAGCATTTGTAGAAGTGAAAATTATTTGATTTAAAACAAAATGTT  99

seq1  ATCATCAGTGGGTGTGTATGCATGCAACCTCTCTCTCTCTCTCTCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCAGTGGGTGTGTATGCATGCAACCTCTCTCTCTCTCTCTCTCTCT  149

seq1  CTCTCACTCTCTCTCTCTCTCTTTCTCTCTCTCTCCCTTCCTCTTTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTCTCTCTCTCTCTCTTTCTCTCTCTCTCCCTTCCTCTTTCACA  199

seq1  GACACACACACAGACAGACACAGACAGACACACAGACATACACACACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACACACAGACAGACACAGACAGACACACAGACATACACACACAGA  249

seq1  CACAAAGGCACACACAGACACACACAGACACACACAGACACACACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGGCACACACAGACACACACAGACACACACAGACACACACACACA  299

seq1  CACAGAGACACACACAGACACACACACACACCCCTCATTTGATTAATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGACACACACAGACACACACACACACCCCTCATTTGATTAATTGT  349

seq1  AGATCTTAGACTAAAGGGTAAAGCCTCCCAGAGAAGTAAACATTTTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTAGACTAAAGGGTAAAGCCTCCCAGAGAAGTAAACATTTTGCTT  399

seq1  TAGGCCTGGCTTACAGAAATCATCCCTGAATTTCTATTTGCATGTTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCTGGCTTACAGAAATCATCCCTGAATTTCTATTTGCATGTTTGTC  449

seq1  TCATGGACAGCCAGTTCAAGGAGGCATGTCTACTCTGCTGGAATTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGACAGCCAGTTCAAGGAGGCATGTCTACTCTGCTGGAATTC  495