BAC Information

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BAC

Clone NameB6Ng01-299A10
Chromosome3 (Build37)
Map Location 99,616,757 - 99,617,280
singlet/doubletsinglet
Overlap genenone
Upstream geneHsd3b6, LOC545556, Hsd3b1, Hao3, LOC668557, Wars2, Tbx15, M6pr-ps
Downstream geneSpag17, LOC623045, Wdr3, Gdap2, LOC195514, 4930431B09Rik, OTTMUSG00000007026, Man1a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299A10.bB6Ng01-299A10.g
ACCGA093982GA093983
length518379
definitionB6Ng01-299A10.b B6Ng01-299A10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aggaaactgagtttgaaagttccccagtgattgtaagtcagccctgcttg
acagctattgtgtgcgattttaaagttgttgagcaagcctgctcttccta
acctatgatgcctgaagcattgttgggctccaagtagctgtccatggata
tttagtgtgaagagctaaagaacagagggaaatagcaaactttagaaaaa
aagccaaggctaaaacttgggtgattttttgaaaggatttcttctagtct
agctaaaggcggggctgcaagcccagtttagcaccttctttgattgattg
ccctgtaacttgaagcctgcctttgacctgggggtcagaacactgagttt
accaaggttagaaattattaaaatacttttgcggagagcgtagccatttc
cagagtttcaggtttatagtgagagagttagggtcccaattccaaagtta
gcgtacacttattgtgattagcagccaaagaaaggccaaaaaaatgggaa
tgggtgggtaggggagtg

tgcacaaaaaccatctggtcctgggcttttcttggttgggagacttttaa
tgactgctgctatttctttaggggttttgggactgtttcgatggtttatc
tgaccctgatttaactttgacacctggtatctgtctagaaaattgtccac
ttcattttccaatttggttgaatatagacttttgtaattggatctgatga
ttttactttgaggtagtatctgtctttgacactgaggttcattttctgta
tgcagcaagatgctgtgtcctgtttgtgtatccagtctgttagtctatgt
ctttttattggggaattgggtccattaatcttaagcgatattaagaaaaa
gtgattgcttgttcctgttatttttgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_99616757_99617280
seq2: B6Ng01-299A10.b_45_568 (reverse)

seq1  CACTCCCCTACCCACCCATTCCCATTTTTTTGGCCTTTCTTTGGCTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCCTACCCACCCATTCCCATTTTTTTGGCCTTTCTTTGGCTGCTA  50

seq1  ATCACAATAAGTGTACGCTAACTTTGGAATTGGGACCCTAACTCTCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAATAAGTGTACGCTAACTTTGGAATTGGGACCCTAACTCTCTCAC  100

seq1  TATAAACCTGAAACTCTGGAAATGGCTACGCTCTCCGCAAAAGTATTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACCTGAAACTCTGGAAATGGCTACGCTCTCCGCAAAAGTATTTTA  150

seq1  ATAATTTCTAACCTTGGTAAACTCAGTGTTCTGACCCCCAGGTCAAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCTAACCTTGGTAAACTCAGTGTTCTGACCCCCAGGTCAAAGGC  200

seq1  AGGCTTCAAGTTACAGGGCAATCAATCAAAGAAGGTGCTAAACTGGGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCAAGTTACAGGGCAATCAATCAAAGAAGGTGCTAAACTGGGCTT  250

seq1  GCAGCCCCGCCTTTAGCTAGACTAGAAGAAATCCTTTCAAAAAATCACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCCGCCTTTAGCTAGACTAGAAGAAATCCTTTCAAAAAATCACCC  300

seq1  AAGTTTTAGCCTTGGCTTTTTTTCTAAAGTTTGCTATTTCCCTCTGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTAGCCTTGGCTTTTTTTCTAAAGTTTGCTATTTCCCTCTGTTCT  350

seq1  TTAGCTCTTCACACTAAATATCCATGGACAGCTACTTGGAGCCCAACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTTCACACTAAATATCCATGGACAGCTACTTGGAGCCCAACAAT  400

seq1  GCTTCAGGCATCATAGGTTAGGAAGAGCAGGCTTGCTCAACAACTTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGGCATCATAGGTTAGGAAGAGCAGGCTTGCTCAACAACTTTAAA  450

seq1  ATCGCACACAATAGCTGTCAAGCAGGGCTGACTTACAATCACTGGGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCACACAATAGCTGTCAAGCAGGGCTGACTTACAATCACTGGGGAAC  500

seq1  TTTCAAACTCAGTTTCCTGAATTC  524
      ||||||||||||||||||||||||
seq2  TTTCAAACTCAGTTTCCTGAATTC  524


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