BAC Information

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BAC

Clone NameB6Ng01-299C13
Chromosome3 (Build37)
Map Location 12,431,685 - 12,432,762
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667999, EG621965
Downstream geneLOC100039798, EG668033, LOC668037, LOC100039823
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299C13.bB6Ng01-299C13.g
ACCGA094079GA094080
length1,1711,087
definitionB6Ng01-299C13.b B6Ng01-299C13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatttttccacatgattaccgccactggtgccaacaccatttg
ttgaaaaggctgtccttttttcactggatggttttagcaccattgtcaaa
gatcaggtgaccataggtgtgggctttcatttctgagtcttcaattctat
tccattgatctacctgtctgtcgctgtacaagtaccatgcagtctttgtt
tttttttttttttttttttaatcacaattgttctggagtacagctctagg
tcaagcatggtgattcccccagaggttcttttattgttgagaatagtttt
tgctatcctaggttttttgttattccagatgaatttgcaaattgcccttt
ctaactcagtgaagaattgagtcggaattttgatggggattgcattgaat
ctgtagattgctttcagcaggacagccatttttattatattaatcctgcc
aatccatgtgcatgggagatctttccatcttctgagatcttcaatttctt
cttcagagacttgaaggtcttaacatacagatctttcacttccttagtta
cagtcacaccaaggaattttatattatttatgacttttgagaagggtgtt
gtttccctaaattctttctcatcctgtttatcctttgtgtagagaaaggc
cactgatttgttttagttaattttttatccagctactgcgttgaagctgt
ttatcaggtttaggagttcattggtggaatttttagggtcacatataaac
tatcatatcatctgcaaatagtgatattttcacatcttcctttccaattt
gtatccctttgatctccttatgttgtggaagtactctggctaggacttca
agtactatattgaataggtaggcagaaagtgggcagtcttgtctagtccc
taattttagtgggattgcttccagcttctctccatttactttgttgttgg
cagctggtttgtagtgtattgctatatttatgtttaggtatggcttgatc
tgatcttcatgacttttctcatgaggtggtagattttgtcaatgcttttc
tcccacatctaaaagaatgatcatgtgattttgtgtgttgagttggttta
atgaggatagtgatgatccaattgaactctgcatctggagtaggccaata
cctgggtctgtatagggtact
gaattcttcatcccacagtatttaaaaatctatgctgagatatgaaacaa
aaattaaacaaatacaaataattcctagcctgtttcatgacatatgctta
atgaatgaaaaataaagtgggttatcaaaaaaaattctcaattaataatg
tttccttgaaataaatgtaaaaccaaatataatcaggaagctaaggataa
atcagacatggaaggatgtgcagagggcaccaatgacttttgattacaac
ttaaacctaaagataagtaggtagaatgactgttaaatatggggttattc
aaataagcaaacaatgcagaaataagtatagctctggacaagccttcaat
acactttatttattaagaaatacagtggacaacctattcatgatatactt
tgagagatttttcactatgtgcagaatacatgtaaaacttgaaagaaatt
cttctcttcctttaatatatatacttgattattttgtttgggttagtttg
ttaatgcatatatactattctcttcaacatattccttcacttacttatat
aagtacgtctcatggacaatcatactttgggatactgttttgtatagtgc
aattttcttcttaaaatatcttatatctggtcattgaaatatgtttcaat
ttaattatatgttgttatcacttatgcctatatgagagagagagagaatg
catgtgtgtgtctgtataagattgggtatatctgtgttctgtgacctgca
agactttggggggttgatttgactagacagatggggaaatggaaaaacag
aggccatatgtacaaagtatttgggatatgaagggctgtgtgatctgatg
gagatacagtaacaacaactaagaaactcagcatatttattttatactgc
aacagctgaagccaaggtagcttatctcaataggcagtctctttagtgaa
gcagtctctgcaatcctttccatatactcttttctaaatttcttgccatg
atcgggctcactgtcattttttaggaagtcagcaatttctttcaccttta
gcatgcaccaatgacatgttgcatggtggtgggcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_12431685_12432762
seq2: B6Ng01-299C13.g_67_1153 (reverse)

seq1  GCTGCCCAC--ACATGC-ACCTGTCATT-GTGCATGCT-AAGGTGAAGAA  45
      |||||||||   ||||| || ||||||| ||||||||| ||||||||  |
seq2  GCTGCCCACCACCATGCAACATGTCATTGGTGCATGCTAAAGGTGAAAGA  50

seq1  ATTTGCTGACTT-CTAAAAATGAACAGTGAG-CCGATCATGGCAAGAAAT  93
      | |||||||||| |||||||   |||||||| ||||||||||||||||||
seq2  AATTGCTGACTTCCTAAAAAATGACAGTGAGCCCGATCATGGCAAGAAAT  100

seq1  TTAG-AAAGAGTATATGGAAGGATTTGCAGAGACTGCTTCACTAAAGAGA  142
      |||| ||||||||||||||| |  ||||||||||||||||||||||||||
seq2  TTAGAAAAGAGTATATGGAAAGGATTGCAGAGACTGCTTCACTAAAGAGA  150

seq1  CTGCCTATTGAGATAAGCTACCTTGGCTTCAGCTGTTGCAGTATAAAATA  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTATTGAGATAAGCTACCTTGGCTTCAGCTGTTGCAGTATAAAATA  200

seq1  AATATGCTGAGTTTCTTAGTTGTTGTTACTGTATCTCCATCAGATCACAC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCTGAGTTTCTTAGTTGTTGTTACTGTATCTCCATCAGATCACAC  250

seq1  AGCCCTTCATATCCCAAATACTTTGTACATATGGCCTCTGTTTTTCCATT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTCATATCCCAAATACTTTGTACATATGGCCTCTGTTTTTCCATT  300

seq1  TCCCCATCTGTCTAGTCAAATCAA-CCCCCAAAGTCTTGCAGGTCACAGA  341
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCCCCATCTGTCTAGTCAAATCAACCCCCCAAAGTCTTGCAGGTCACAGA  350

seq1  ACACAGATATACCCAATCTTATACAGACACACACATGCATTCTCTCTCTC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGATATACCCAATCTTATACAGACACACACATGCATTCTCTCTCTC  400

seq1  TCTCATATAGGCATAAGTGATAACAACATATAATTAAATTGAAACATATT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATAGGCATAAGTGATAACAACATATAATTAAATTGAAACATATT  450

seq1  TCAATGACCAGATATAAGATATTTTAAGAAGAAAATTGCACTATACAAAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGACCAGATATAAGATATTTTAAGAAGAAAATTGCACTATACAAAA  500

seq1  CAGTATCCCAAAGTATGATTGTCCATGAGACGTACTTATATAAGTAAGTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCCCAAAGTATGATTGTCCATGAGACGTACTTATATAAGTAAGTG  550

seq1  AAGGAATATGTTGAAGAGAATAGTATATATGCATTAACAAACTAACCCAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATATGTTGAAGAGAATAGTATATATGCATTAACAAACTAACCCAA  600

seq1  ACAAAATAATCAAGTATATATATTAAAGGAAGAGAAGAATTTCTTTCAAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATAATCAAGTATATATATTAAAGGAAGAGAAGAATTTCTTTCAAG  650

seq1  TTTTACATGTATTCTGCACATAGTGAAAAATCTCTCAAAGTATATCATGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATGTATTCTGCACATAGTGAAAAATCTCTCAAAGTATATCATGA  700

seq1  ATAGGTTGTCCACTGTATTTCTTAATAAATAAAGTGTATTGAAGGCTTGT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTGTCCACTGTATTTCTTAATAAATAAAGTGTATTGAAGGCTTGT  750

seq1  CCAGAGCTATACTTATTTCTGCATTGTTTGCTTATTTGAATAACCCCATA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTATACTTATTTCTGCATTGTTTGCTTATTTGAATAACCCCATA  800

seq1  TTTAACAGTCATTCTACCTACTTATCTTTAGGTTTAAGTTGTAATCAAAA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAGTCATTCTACCTACTTATCTTTAGGTTTAAGTTGTAATCAAAA  850

seq1  GTCATTGGTGCCCTCTGCACATCCTTCCATGTCTGATTTATCCTTAGCTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGGTGCCCTCTGCACATCCTTCCATGTCTGATTTATCCTTAGCTT  900

seq1  CCTGATTATATTTGGTTTTACATTTATTTCAAGGAAACATTATTAATTGA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTATATTTGGTTTTACATTTATTTCAAGGAAACATTATTAATTGA  950

seq1  GAATTTTTTTTGATAACCCACTTTATTTTTCATTCATTAAGCATATGTCA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTTTTGATAACCCACTTTATTTTTCATTCATTAAGCATATGTCA  1000

seq1  TGAAACAGGCTAGGAATTATTTGTATTTGTTTAATTTTTGTTTCATATCT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAGGCTAGGAATTATTTGTATTTGTTTAATTTTTGTTTCATATCT  1050

seq1  CAGCATAGATTTTTAAATACTGTGGGATGAAGAATTC  1078
      |||||||||||||||||||||||||||||||||||||
seq2  CAGCATAGATTTTTAAATACTGTGGGATGAAGAATTC  1087