BAC Information

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BAC

Clone NameB6Ng01-299F17
Chromosome3 (Build37)
Map Location 122,292,650 - 122,293,752
singlet/doubletsinglet
Overlap genenone
Upstream geneA730020M07Rik, 4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29, Abca4, EG668788, LOC626807, LOC100043724, Gclm, Ppia-ps3_1245.1, Dnttip2, LOC675117, LOC100043726, Bcar3, Fnbp1l
Downstream genePpia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2, Synpo2, Sec24d, G430022H21Rik, Prss12, EG668804, Ndst3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299F17.bB6Ng01-299F17.g
ACCGA094219GA094220
length1,0971,067
definitionB6Ng01-299F17.b B6Ng01-299F17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaaacaaatatcaacagtagtaaaagtataaaatactgaatta
taccccatgtcatgtttgtttaatcatcaaacccctttaaaggcttgcag
gcagaaggtagaaaaggggtgaaagtcagcaggctctggctgcttaggca
ggttcccctttgctctgagatttaaggattttaagtgtctttctacaatc
aaaccgacttatgatctagctagtcaatactccccacagcacgaggcaat
ggttatctaacttaaccatcagtcctctaactcaaccactatggctagag
gtcatggtttaacccgtacaatactatttgcttttaacattgagctactt
aaatgtgtaacttcattgctaagaagtgagaagtaaatcgacttacctca
attgtttcgcatagttctgttcaatttcaattctctctttaacaaacttg
gcatatctttccaagaagtcaattccccattgggtatgcttatctaagct
gtcgaactgatcctagaaaatgaaagcaagaacaggctcaacaagcttca
aattgttgccacaaatattttaagcactttctgatatttgtacagaagta
attaagtgtaaagtataaagggaagccctggtccctcccaccttccccta
aaccaggacaagtgtgaggaccaccactggtgtgcaactgcagctcttcc
ctgggcgatcctttccagattttgttcttgccaagtctctacaatcacgt
aagccaattatctgtaagaatctctttagagtgttatcactccctcaccc
tgtgcacagagggctagtgccagactcgaacagaaaagcagcagatctcc
aaaggctgtagaatggcccgcacatcctgtttcaagaactggaaggaggg
caaaggaacaactgtaaaggccaaactcagaaccaaagaaatggagcagg
caagaatggaagggaggttgtcctttggaggagaagccatcagctacagg
aaacaacaacaagctcactccaccaattgctcctgacttatatggccaca
cagcagatgaatgggtaaggagatgtattcatggtggtgcgcctgag
gaattcactctccgtataagctccccgggcgccatggtatggcccaaatg
attgtttcgacatcgtggctaaaagtcacttgtgaagctgaaaaggtccc
aggaatgtttcaaaactgaaattttagcagtacaaatgattttctctcta
aagtgattacttcacaggtcatacataatcagcagtttgtgttgctaagg
acattttagcccccgttaataacagctgatttaagtacccaactgtgtcc
aataagcaggtcatatgtacaaagaaaaatgagtagagaaacatcagagt
taaatgacatcatgcatgcatcaaatggacttagcagctacagaacattc
cacccaaacacaaaaggatgcacattatactccgaggcacacagaagcct
ctaaaacacaacacatactcggacacagcacaaaccttcacacattcaaa
gaggttgaaatacctccatgtatcccatctgaccacagtgtaatgaggct
taaaactgaccacaaaccaatctctagtaaaaacacagactcgtggagat
taaacaacttattacgaaatgacgagtaggtcagtgaagaaacggagaaa
gaaaataagaaatttcccagaactaaatgaaaacaaaaccacagcccagc
aaaacctctgaccacatcaaaagcagtcccacgagagaaatttacagtta
tgagtccctacattaagaagctacacccacgaagtctcaccaacataagc
tgaacaaaggttgaccccattaacacgccaaacaaacagagcagagacca
caggccctcgaccctgcatgaagaactataggcaagtggggaaatctggg
tgctagagagatgacactccccaggggagagaagagcatacaatcgattg
tctagcgccaaatgggttagcctgaaatgatatatacaggtagcattata
tggagtgaatagcttatatttaggaacatatatatatatatatatacagc
attagtttttgtaaatgagcctatgcatatgagagagcaggagagttata
ttggggagggattttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_122292650_122293752
seq2: B6Ng01-299F17.b_46_1142

seq1  GAATTCTAAAACAAATATCAACAGTAGTAAAAGTATAAAATACTGAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAACAAATATCAACAGTAGTAAAAGTATAAAATACTGAATTA  50

seq1  TACCCCATGTCATGTTTGTTTAATCATCAAACCCCTTTAAAGGCTTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCATGTCATGTTTGTTTAATCATCAAACCCCTTTAAAGGCTTGCAG  100

seq1  GCAGAAGGTAGAAAAGGGGTGAAAGTCAGCAGGCTCTGGCTGCTTAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGGTAGAAAAGGGGTGAAAGTCAGCAGGCTCTGGCTGCTTAGGCA  150

seq1  GGTTCCCCTTTGCTCTGAGATTTAAGGATTTTAAGTGTCTTTCTACAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCCCTTTGCTCTGAGATTTAAGGATTTTAAGTGTCTTTCTACAATC  200

seq1  AAACCGACTTATGATCTAGCTAGTCAATACTCCCCACAGCACGAGGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCGACTTATGATCTAGCTAGTCAATACTCCCCACAGCACGAGGCAAT  250

seq1  GGTTATCTAACTTAACCATCAGTCCTCTAACTCAACCACTATGGCTAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTAACTTAACCATCAGTCCTCTAACTCAACCACTATGGCTAGAG  300

seq1  GTCATGGTTTAACCCGTACAATACTATTTGCTTTTAACATTGAGCTACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGTTTAACCCGTACAATACTATTTGCTTTTAACATTGAGCTACTT  350

seq1  AAATGTGTAACTTCATTGCTAAGAAGTGAGAAGTAAATCGACTTACCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTAACTTCATTGCTAAGAAGTGAGAAGTAAATCGACTTACCTCA  400

seq1  ATTGTTTCGCATAGTTCTGTTCAATTTCAATTCTCTCTTTAACAAACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCGCATAGTTCTGTTCAATTTCAATTCTCTCTTTAACAAACTTG  450

seq1  GCATATCTTTCCAAGAAGTCAATTCCCCATTGGGTATGCTTATCTAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCTTTCCAAGAAGTCAATTCCCCATTGGGTATGCTTATCTAAGCT  500

seq1  GTCGAACTGATCCTAGAAAATGAAAGCAAGAACAGGCTCAACAAGCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAACTGATCCTAGAAAATGAAAGCAAGAACAGGCTCAACAAGCTTCA  550

seq1  AATTGTTGCCACAAATATTTTAAGCACTTTCTGATATTTGTACAGAAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTGCCACAAATATTTTAAGCACTTTCTGATATTTGTACAGAAGTA  600

seq1  ATTAAGTGTAAAGTATAAAGGGAAGCCCTGGTCCCTCCCACCTTCCCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGTAAAGTATAAAGGGAAGCCCTGGTCCCTCCCACCTTCCCCTA  650

seq1  AACCAGGACAAGTGTGAGGACCACCACTGGTGTGCAACTGCAGCTCTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGACAAGTGTGAGGACCACCACTGGTGTGCAACTGCAGCTCTTCC  700

seq1  CTGGGCGATCCTTTCCAGATTTTGTTCTTGCCAAGTCTCTACAATCACGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCGATCCTTTCCAGATTTTGTTCTTGCCAAGTCTCTACAATCACGT  750

seq1  AAGCCAATTATCTGTAAGAATCTCTTTAGAGTGTTATCACTCCCTCACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAATTATCTGTAAGAATCTCTTTAGAGTGTTATCACTCCCTCACCC  800

seq1  TGTGCACAGAGGGCTAGTGCCAGACTCGAACAGAAAAGCAGCAGATCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACAGAGGGCTAGTGCCAGACTCGAACAGAAAAGCAGCAGATCTCC  850

seq1  -AAGGCTGTAGAATGGCCCGCACATCCTGTTTCAAGAACTGGAAGGAGGG  899
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGTAGAATGGCCCGCACATCCTGTTTCAAGAACTGGAAGGAGGG  900

seq1  CAAAGGAAACAACTGTAAAGG-CAAACTCAGGAAACCAAAGAAATGGAGC  948
      |||||| |||||||||||||| |||||||||  |||||||||||||||||
seq2  CAAAGG-AACAACTGTAAAGGCCAAACTCAG--AACCAAAGAAATGGAGC  947

seq1  AGGCAAAGAATGGAAAGGGAGGTTGTCCTTTGGGAGGAGAAAGCCATCAG  998
      |||| |||||||| ||||||||||||||||| ||||||| ||||||||| 
seq2  AGGC-AAGAATGG-AAGGGAGGTTGTCCTTT-GGAGGAG-AAGCCATCA-  992

seq1  GCTACAGGAAACAACAAACAAGCTCACT-CACCAATTGCTCCTGACTTAT  1047
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  GCTACAGGAAACAAC-AACAAGCTCACTCCACCAATTGCTCCTGACTTAT  1041

seq1  ATGGGCCACACAAGCAGATGAAT-GGTAAGAGAATGTATTCATGGTGGTG  1096
      || |||||||| ||||||||||| ||||||   |||||||||||||||||
seq2  AT-GGCCACAC-AGCAGATGAATGGGTAAGGAGATGTATTCATGGTGGTG  1089

seq1  CG-CTGAG  1103
      || |||||
seq2  CGCCTGAG  1097