BAC Information

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BAC

Clone NameB6Ng01-299N22
Chromosome3 (Build37)
Map Location 16,289,563 - 16,290,221
singlet/doubletsinglet
Overlap geneLOC100040034
Upstream geneLOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3
Downstream geneLOC100040059, EG383936, LOC622737
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299N22.bB6Ng01-299N22.g
ACCGA094594GA094595
length7951,156
definitionB6Ng01-299N22.b B6Ng01-299N22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttctacatatttgagaatcttatttaattggataggcaggac
tgaagcttacatttatagagggagaaagtacagataccaaggtatggatg
gatgctctgccttagtcagttgtctcaggttagaatggttttgagtttca
gggtaagattaatcacatgaaactcaagaagaaagaagaccaaagtgtgg
atactctgattcttcttagaaggggggacaaaatgcccttggaaggagtt
acagagacaaactttgaagcagagaatgtaggaatgaccatccagaaact
gccccacctggtgatccatccaataaacaaccaccaaacccagacactat
tacaggtgtcaacacgagcttgctgacaggagcctgatatagctgtctcc
tgaaagactctgccagtgcctgacaaatacagaagtggatgctcacagtc
atccattggatggagtacagggtacccaatgaaggagctagagaaagtac
ccaaggagatgaaggggtttgcagccccataggacgaacaacaatatgaa
ctaatcagtaaccccagagttccctgggactaaaccaccaaccaaagaaa
acacatggaggaacttgtggctctagatacatatgcagtagaggatgtcc
tagtcggtcatcaatgggagggagaggatcttgttcctgtgaagtttata
taccccagtataggggaatgcctggaccaggaagtaggagtgggtgtgtt
gggggagcagcaggagcaagtagaggataggggattttcggaggg

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggataattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctggttttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttgggttgattttcaccccctgagtttgat
tatttccctgccgtctactcctctttgggtgaatttgcttcctttttttc
tagggctttttagaatgtgttgtcaagctgctaggtatgtggttgtctcc
cgtttcttctgggaagcacttcagcagcttatgagtttccctcttagaaa
ttgctattcattggtgtcccataaggtttggggtacgtttgtggcttcat
ttcattgaaactcagaagaagtcttaaattccttccttaatcccttcctg
atccaaggtatcaattgaagaagagtggtatttccagttcccacctgtgg
gattgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16289563_16290221
seq2: B6Ng01-299N22.b_47_705

seq1  GAATTCTCTTCTACATATTTGAGAATCTTATTTAATTGGATAGGCAGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTACATATTTGAGAATCTTATTTAATTGGATAGGCAGGAC  50

seq1  TGAAGCTTACATTTATAGAGGGAGAAAGTACAGATACCAAGGTATGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTTACATTTATAGAGGGAGAAAGTACAGATACCAAGGTATGGATG  100

seq1  GATGCTCTGCCTTAGTCAGTTGTCTCAGGTTAGAATGGTTTTGAGTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCTGCCTTAGTCAGTTGTCTCAGGTTAGAATGGTTTTGAGTTTCA  150

seq1  GGGTAAGATTAATCACATGAAACTCAAGAAGAAAGAAGACCAAAGTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAGATTAATCACATGAAACTCAAGAAGAAAGAAGACCAAAGTGTGG  200

seq1  ATACTCTGATTCTTCTTAGAAGGGGGGACAAAATGCCCTTGGAAGGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTGATTCTTCTTAGAAGGGGGGACAAAATGCCCTTGGAAGGAGTT  250

seq1  ACAGAGACAAACTTTGAAGCAGAGAATGTAGGAATGACCATCCAGAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACAAACTTTGAAGCAGAGAATGTAGGAATGACCATCCAGAAACT  300

seq1  GCCCCACCTGGTGATCCATCCAATAAACAACCACCAAACCCAGACACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACCTGGTGATCCATCCAATAAACAACCACCAAACCCAGACACTAT  350

seq1  TACAGGTGTCAACACGAGCTTGCTGACAGGAGCCTGATATAGCTGTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTGTCAACACGAGCTTGCTGACAGGAGCCTGATATAGCTGTCTCC  400

seq1  TGAAAGACTCTGCCAGTGCCTGACAAATACAGAAGTGGATGCTCACAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGACTCTGCCAGTGCCTGACAAATACAGAAGTGGATGCTCACAGTC  450

seq1  ATCCATTGGATGGAGTACAGGGTACCCAATGAAGGAGCTAGAGAAAGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTGGATGGAGTACAGGGTACCCAATGAAGGAGCTAGAGAAAGTAC  500

seq1  CCAAGGAGATGAAGGGGTTTGCAGCCCCATAGGACGAACAACAATATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGAGATGAAGGGGTTTGCAGCCCCATAGGACGAACAACAATATGAA  550

seq1  CTAATCAGTAACCCCAGAGTTCCCTGGGACTAAACCACCAACCAAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCAGTAACCCCAGAGTTCCCTGGGACTAAACCACCAACCAAAGAAA  600

seq1  ACACATGGAGGAACTTGTGGCTCTAGATACATATGCAGTAGAGGATGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGGAGGAACTTGTGGCTCTAGATACATATGCAGTAGAGGATGTCC  650

seq1  TAGTCGGTC  659
      |||||||||
seq2  TAGTCGGTC  659


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