BAC Information

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BAC

Clone NameB6Ng01-300I04
Chromosome3 (Build37)
Map Location 150,356,797 - 150,444,314
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040620, LOC100040633, LOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300I04.bB6Ng01-300I04.g
ACCGA095069GA095070
length1,1731,120
definitionB6Ng01-300I04.b B6Ng01-300I04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,443,154 - 150,444,314)(150,356,797 - 150,357,931)
sequence
gaattcctctgttaacgggcaataaagcttccataggtataattaatcca
ggccatttttgatccacacctttatacccagtgctgcagatagggtcaga
cactccagaagaggatgaaccaagatcaagaaacttggttttcatttctt
ttaacaatttcatccagtgtctagggacaaacttacatctaactttgaac
acagaaaaacacacacatgccattcaaagactataaaatataatagatga
aaatataatacatgcaaataaaatcaagtttatatgtttaggcaacttct
tctcagagtccatcttacagtttccagtggtgatttaaggatgttacaag
gagggaatggttgtttcctatcaaaacaagttctgaacaaatttgcaagt
tgtccaaaagcaatgtaaacttaacggagaatgtaatgtcctgtagtcta
ggtaggtaaattagggcttctaagaacactttatttttttgtttgtttgt
tttgtatctaatgtatttaatttaaaaaaacagtttataactttaataaa
ccttaagatcaagggaaaatgagcattttcagtagaagcaaattgctttc
aaactataggtaagttatttaaaaccttgggaaaactcactgacacaaac
atcacttgagaaagaaaacaggatttttttttcatttaccatttttattt
ttaaatcacttattttattattgggattataatataactacatcatttcc
catttaacatttatccctataaatcctcccatattacctccttaccttta
aattcatggcatcgtctttaaattaattattgttatatacatacatacat
acacacacacatacatgcaatcctaaatacataggtaaaatcttcttagt
ctgtacaatgttacttatacacaagctttcagtgatgaccttttttttaa
ctgtcaataagcataaaaaaattctttaagagcaataaaaaagttcttaa
accccaaggaatcactccaatttttgtccataggcttttgaaagagttca
gcttcaatataaacttgaaagctgggtctcaagagaaggttcttaccaca
tagccatgccactaccgtggcctagaacatccgagtctacaggaggatgt
attgtagagaggggctctgtgtt

gaattctttgggatcaatttctagattaatgattgatgagagaaggctga
tcccactgtgggtggttttgccctttgctggtgatcctctgttatataag
aaaacaggctgagaaagctgtgagtggcaacgcaatacgcagcatttttc
tagggtctgtgaatcagctcctacctctccgttattgtcttgagttcctg
ctctgactttaccagggattaactatgacaaggaaaataaatccttttat
ggtcaggaggcatttgatgctttatcgtggcagtaaagagcaaatttagt
cactgagtttgagaatccattaaatgaaagggatgctacttggttcttgc
cttttggtgggaagtttgaaagtcccaccaaacagttcccttctgaggaa
taacgcatagagtgtttttcttagagaggagtaagaattatgcagttgtc
ctttttcaatgtttgagtgcattaatctatccaaggcctcttttctccat
cttctgctggaaagttgtttgactccccctccctcacttccctgtctctc
tccatacatcacttcttggattggattgtttctgtgaattttagatgcat
ttggtttttacaatctattatatctctctgctattcttccatttagttta
tataagagattaacaataactgtattatcataaatataataggaacatat
tcaggcattatagaaggaagtttgtgtgtgacttaagtgtattcttcaag
gaatttgatatacatccacttcagtgttaataagttaactagaagaaaaa
aaaaactatcattggatcttttcaatcccatggggtgtacgtaatttctc
acaacatacatagccatggctgttcctggactggagaaagatgggctcta
tctttcctgcataatttaaaagagtttcctccctttcataaggtctgtag
ttcttcccaaaggtttgcatcaaagatctcaatgaatagcatctcatctg
ctccttcacacatagttttctccgatttattctgtgactctgcactagtt
accctattcctatttctatacacataaaattattcatataggaaaatcca
gttcatttttatgaacctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150443154_150444314
seq2: B6Ng01-300I04.b_42_1214 (reverse)

seq1  AACACAGAGCCCCTCT-AACAATACATCCTCCTGTAGACTCGGGATG-TC  48
      ||||||||||||||||  ||||||||||||||||||||||| ||||| ||
seq2  AACACAGAGCCCCTCTCTACAATACATCCTCCTGTAGACTC-GGATGTTC  49

seq1  TAGGCCACGGTAGT-GCATGGCTATGTG--TAGAACC-TCTC-TGAGACC  93
      |||||||||||||| |||||||||||||   |||||| |||| |||||||
seq2  TAGGCCACGGTAGTGGCATGGCTATGTGGTAAGAACCTTCTCTTGAGACC  99

seq1  CAGCTTTCAAGTTTATATGAAAGCTGAACTCTTTCAAAAGCCTATGGACA  143
      ||||||||||||||||||  ||||||||||||||||||||||||||||||
seq2  CAGCTTTCAAGTTTATATTGAAGCTGAACTCTTTCAAAAGCCTATGGACA  149

seq1  AAA--TGGAGTGATTCC-TGGGGTTTAAGAACTTTTT--ATGCTCTTAAA  188
      |||  |||||||||||| |||||||||||||||||||   ||||||||||
seq2  AAAATTGGAGTGATTCCTTGGGGTTTAAGAACTTTTTTATTGCTCTTAAA  199

seq1  GAA-TTTTTTATGCTTATTGACAGTTAAAAAAAAGGTCATCACTGAAAGC  237
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTTTATGCTTATTGACAGTTAAAAAAAAGGTCATCACTGAAAGC  249

seq1  TTGTGTATAAGTAACATTGTACAGACTAAGAAGATTTTACCTATGTATTT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATAAGTAACATTGTACAGACTAAGAAGATTTTACCTATGTATTT  299

seq1  AGGATTGCATGTATGTGTGTGTGTATGTATGTATGTATATAACAATAATT  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGCATGTATGTGTGTGTGTATGTATGTATGTATATAACAATAATT  349

seq1  AATTTAAAGACGATGCCATGAATTTAAAGGTAAGGAGGTAATATGGGAGG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAGACGATGCCATGAATTTAAAGGTAAGGAGGTAATATGGGAGG  399

seq1  ATTTATAGGGATAAATGTTAAATGGGAAATGATGTAGTTATATTATAATC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGGGATAAATGTTAAATGGGAAATGATGTAGTTATATTATAATC  449

seq1  CCAATAATAAAATAAGTGATTTAAAAATAAAAATGGTAAATGAAAAAAAA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAATAAAATAAGTGATTTAAAAATAAAAATGGTAAATGAAAAAAAA  499

seq1  ATCCTGTTTTCTTTCTCAAGTGATGTTTGTGTCAGTGAGTTTTCCCAAGG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTTTTCTTTCTCAAGTGATGTTTGTGTCAGTGAGTTTTCCCAAGG  549

seq1  TTTTAAATAACTTACCTATAGTTTGAAAGCAATTTGCTTCTACTGAAAAT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATAACTTACCTATAGTTTGAAAGCAATTTGCTTCTACTGAAAAT  599

seq1  GCTCATTTTCCCTTGATCTTAAGGTTTATTAAAGTTATAAACTGTTTTTT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTTCCCTTGATCTTAAGGTTTATTAAAGTTATAAACTGTTTTTT  649

seq1  TAAATTAAATACATTAGATACAAAACAAACAAACAAAAAAATAAAGTGTT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAATACATTAGATACAAAACAAACAAACAAAAAAATAAAGTGTT  699

seq1  CTTAGAAGCCCTAATTTACCTACCTAGACTACAGGACATTACATTCTCCG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAGCCCTAATTTACCTACCTAGACTACAGGACATTACATTCTCCG  749

seq1  TTAAGTTTACATTGCTTTTGGACAACTTGCAAATTTGTTCAGAACTTGTT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTACATTGCTTTTGGACAACTTGCAAATTTGTTCAGAACTTGTT  799

seq1  TTGATAGGAAACAACCATTCCCTCCTTGTAACATCCTTAAATCACCACTG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGGAAACAACCATTCCCTCCTTGTAACATCCTTAAATCACCACTG  849

seq1  GAAACTGTAAGATGGACTCTGAGAAGAAGTTGCCTAAACATATAAACTTG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGTAAGATGGACTCTGAGAAGAAGTTGCCTAAACATATAAACTTG  899

seq1  ATTTTATTTGCATGTATTATATTTTCATCTATTATATTTTATAGTCTTTG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTGCATGTATTATATTTTCATCTATTATATTTTATAGTCTTTG  949

seq1  AATGGCATGTGTGTGTTTTTCTGTGTTCAAAGTTAGATGTAAGTTTGTCC  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCATGTGTGTGTTTTTCTGTGTTCAAAGTTAGATGTAAGTTTGTCC  999

seq1  CTAGACACTGGATGAAATTGTTAAAAGAAATGAAAACCAAGTTTCTTGAT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACACTGGATGAAATTGTTAAAAGAAATGAAAACCAAGTTTCTTGAT  1049

seq1  CTTGGTTCATCCTCTTCTGGAGTGTCTGACCCTATCTGCAGCACTGGGTA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTCATCCTCTTCTGGAGTGTCTGACCCTATCTGCAGCACTGGGTA  1099

seq1  TAAAGGTGTGGATCAAAAATGGCCTGGATTAATTATACCTATGGAAGCTT  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGTGGATCAAAAATGGCCTGGATTAATTATACCTATGGAAGCTT  1149

seq1  TATTGCCCGTTAACAGAGGAATTC  1161
      ||||||||||||||||||||||||
seq2  TATTGCCCGTTAACAGAGGAATTC  1173


seq1: chr3_150356797_150357931
seq2: B6Ng01-300I04.g_66_1185

seq1  GAATTCTTTGGGATCAATTTCTAGATTAATGATTGATGAGAGAAGGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGGATCAATTTCTAGATTAATGATTGATGAGAGAAGGCTGA  50

seq1  TCCCACTGTGGGTGGTTTTGCCCTTTGCTGGTGATCCTCTGTTATATAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTGTGGGTGGTTTTGCCCTTTGCTGGTGATCCTCTGTTATATAAG  100

seq1  AAAACAGGCTGAGAAAGCTGTGAGTGGCAACGCAATACGCAGCATTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGCTGAGAAAGCTGTGAGTGGCAACGCAATACGCAGCATTTTTC  150

seq1  TAGGGTCTGTGAATCAGCTCCTACCTCTCCGTTATTGTCTTGAGTTCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTCTGTGAATCAGCTCCTACCTCTCCGTTATTGTCTTGAGTTCCTG  200

seq1  CTCTGACTTTACCAGGGATTAACTATGACAAGGAAAATAAATCCTTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACTTTACCAGGGATTAACTATGACAAGGAAAATAAATCCTTTTAT  250

seq1  GGTCAGGAGGCATTTGATGCTTTATCGTGGCAGTAAAGAGCAAATTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGAGGCATTTGATGCTTTATCGTGGCAGTAAAGAGCAAATTTAGT  300

seq1  CACTGAGTTTGAGAATCCATTAAATGAAAGGGATGCTACTTGGTTCTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGTTTGAGAATCCATTAAATGAAAGGGATGCTACTTGGTTCTTGC  350

seq1  CTTTTGGTGGGAAGTTTGAAAGTCCCACCAAACAGTTCCCTTCTGAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGTGGGAAGTTTGAAAGTCCCACCAAACAGTTCCCTTCTGAGGAA  400

seq1  TAACGCATAGAGTGTTTTTCTTAGAGAGGAGTAAGAATTATGCAGTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGCATAGAGTGTTTTTCTTAGAGAGGAGTAAGAATTATGCAGTTGTC  450

seq1  CTTTTTCAATGTTTGAGTGCATTAATCTATCCAAGGCCTCTTTTCTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAATGTTTGAGTGCATTAATCTATCCAAGGCCTCTTTTCTCCAT  500

seq1  CTTCTGCTGGAAAGTTGTTTGACTCCCCCTCCCTCACTTCCCTGTCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTGGAAAGTTGTTTGACTCCCCCTCCCTCACTTCCCTGTCTCTC  550

seq1  TCCATACATCACTTCTTGGATTGGATTGTTTCTGTGAATTTTAGATGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACATCACTTCTTGGATTGGATTGTTTCTGTGAATTTTAGATGCAT  600

seq1  TTGGTTTTTACAATCTATTATATCTCTCTGCTATTCTTCCATTTAGTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTACAATCTATTATATCTCTCTGCTATTCTTCCATTTAGTTTA  650

seq1  TATAAGAGATTAACAATAACTGTATTATCATAAATATAATAGGAACATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAGATTAACAATAACTGTATTATCATAAATATAATAGGAACATAT  700

seq1  TCAGGCATTATAGAAGGAAGTTTGTGTGTGACTTAAGTGTATTCTTCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCATTATAGAAGGAAGTTTGTGTGTGACTTAAGTGTATTCTTCAAG  750

seq1  GAATTTGATATACATCCACTTCAGTGTTAATAAGTTAACTAGAAGAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGATATACATCCACTTCAGTGTTAATAAGTTAACTAGAAGAAAAA  800

seq1  AAAAACTATCATTGGATCTTTTCAATCCCATGGGGTGTACGTAATTTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTATCATTGGATCTTTTCAATCCCATGGGGTGTACGTAATTTCTC  850

seq1  ACAACATACATAGCCATGGCTGTTCCTGGACTGGAGAAAGATGGGCTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATACATAGCCATGGCTGTTCCTGGACTGGAGAAAGATGGGCTCTA  900

seq1  TCTTTCCTGCATAATTTAAAAGAGTTTCCTCCCTTTCATAAGGTCTGTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTGCATAATTTAAAAGAGTTTCCTCCCTTTCATAAGGTCTGTAG  950

seq1  TTCTTCCCAAAGGTTTGCATCAAAGATCTCAATGAATAAGCATCTCATCT  1000
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTCTTCCCAAAGGTTTGCATCAAAGATCTCAATGAAT-AGCATCTCATCT  999

seq1  GCTCC-TCACACATAAGTTTTCTTCCGGATTTATTCTGTGACTCTTGCCA  1049
      ||||| |||||||| ||||||||  | ||||||||||||||||||   ||
seq2  GCTCCTTCACACAT-AGTTTTCT--CCGATTTATTCTGTGACTCT--GCA  1044

seq1  CCTTAGTTAACCCTAATTTCCTATTTCTATACACATAAAAATTATTCATA  1099
      |  ||||| ||||||  ||||||||||||||||||| |||||||||||||
seq2  C--TAGTT-ACCCTA--TTCCTATTTCTATACACAT-AAAATTATTCATA  1088

seq1  TAAGAAAAAAATCAAGTTCATTTTTTATGAAACTAC  1135
      || |   |||||| |||||| |||||||||| ||||
seq2  TAGG---AAAATCCAGTTCA-TTTTTATGAACCTAC  1120


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