MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-301A09
Chromosome	3 (Build37)
Map Location	27,569,139 - 27,707,627
singlet/doublet	doublet
Overlap gene	Fndc3b
Upstream gene	Spata16, LOC665258, Ect2, Aadacl1, LOC100040527, Tnfsf10, Ghsr
Downstream gene	E030011K20Rik, Pld1, Tnik, Slc2a2, EG624446, Eif5a2, Rpl22l1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Spata16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70862 MGI:1918112
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC665258 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	Ect2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13605 MGI:95281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aadacl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320024 MGI:2443191
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040527 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040527
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Tnfsf10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22035 MGI:107414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ghsr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208188 MGI:2441906
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fndc3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72007 MGI:1919257
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E030011K20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208613 MGI:2685410
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 2 Proteins

name	Pld1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18805 MGI:109585
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665113 MGI:1916264
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 125 ESTs, 2 Proteins

name	Slc2a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20526 MGI:1095438
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624446 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624446 MGI:3648080
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 105 ESTs, 5 Proteins

name	Eif5a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208691 MGI:1933735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl22l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68028 MGI:1915278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spata16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375818 GeneID:70862 MGI:1918112
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated 16 transcript_id : NM_029150.2

name	Spata16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312343 GeneID:70862 MGI:1918112
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated 16 transcript_id : NM_027583.1

name	Ect2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131143 GeneID:13605 MGI:95281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ect2 oncogene transcript_id : NM_007900.2

name	Aadacl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363800 GeneID:320024 MGI:2443191
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arylacetamide deacetylase-like 1 transcript_id : NM_178772.3

name	Tnfsf10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:79750226 GeneID:22035 MGI:107414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor necrosis factor (ligand) superfamily, member 10 transcript_id : NM_009425.2

name	Ghsr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801989 GeneID:208188 MGI:2441906
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth hormone secretagogue receptor transcript_id : NM_177330.3

name	Fndc3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27502352 GeneID:72007 MGI:1919257
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibronectin type III domain containing 3B transcript_id : NM_173182.1

name	E030011K20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250854 GeneID:208613 MGI:2685410
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 2 Proteins product : RIKEN cDNA E030011K20 gene transcript_id : XM_149293.6

name	Pld1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47087137 GeneID:18805 MGI:109585
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase D1 transcript_id : NM_008875.3

name	Tnik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250827 GeneID:665113 MGI:1916264
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 101 ESTs, 1 Protein product : TRAF2 and NCK interacting kinase, transcript variant 2 transcript_id : XM_001473621.1

name	Tnik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250825 GeneID:665113 MGI:1916264
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 120 ESTs, 2 Proteins product : TRAF2 and NCK interacting kinase, transcript variant 1 transcript_id : XM_001473602.1

name	Slc2a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13654261 GeneID:20526 MGI:1095438
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 2 (facilitated glucose transporter), member 2 transcript_id : NM_031197.1

name	EG624446 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369483 GeneID:624446 MGI:3648080
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 105 ESTs, 5 Proteins product : predicted gene, EG624446 transcript_id : XM_888996.2

name	Eif5a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130440 GeneID:208691 MGI:1933735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 5A2 transcript_id : NM_177586.5

name	Rpl22l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387922 GeneID:68028 MGI:1915278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L22 like 1 transcript_id : NM_026517.2

name	Spata16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28077041 CCDS:CCDS17269.1 GeneID:70862 MGI:1918112
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence ISS] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; spermatogenesis-related protein product : Nyd-sp12 protein isoform 2 protein_id : NP_083426.1

name	Spata16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312344 GeneID:70862 MGI:1918112
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence ISS] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; spermatogenesis-related protein product : Nyd-sp12 protein isoform 1 protein_id : NP_081859.1

name	Ect2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681261 CCDS:CCDS17270.1 GeneID:13605 MGI:95281
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 product : ect2 oncogene protein_id : NP_031926.1

name	Aadacl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520239 CCDS:CCDS17271.1 GeneID:320024 MGI:2443191
definition	codon_start : 1 product : arylacetamide deacetylase-like 1 protein_id : NP_848887.1

name	Tnfsf10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678431 CCDS:CCDS17272.1 GeneID:22035 MGI:107414
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005164 - tumor necrosis factor receptor binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : TNF-related apoptosis inducing ligand; TRAIL/APO2L product : tumor necrosis factor (ligand) superfamily, member 10 protein_id : NP_033451.1

name	Ghsr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893445 CCDS:CCDS17273.1 GeneID:208188 MGI:2441906
definition	GO_component : GO:0009986 - cell surface [Evidence ISS] GO_function : GO:0001616 - growth hormone secretagogue receptor activity [Evidence ISS]; GO:0016520 - growth hormone-releasing hormone receptor activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0008343 - adult feeding behavior [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0030252 - growth hormone secretion [Evidence ISS]; GO:0009755 - hormone-mediated signaling [Evidence ISS]; GO:0032100 - positive regulation of appetite [Evidence IMP]; GO:0040018 - positive regulation of body size [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G-protein coupled receptor; growth hormone secretagogue receptor type 1 product : growth hormone secretagogue receptor protein_id : NP_796304.1

name	Fndc3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27502353 CCDS:CCDS17274.1 GeneID:72007 MGI:1919257
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0045600 - positive regulation of fat cell differentiation [Evidence IPI] codon_start : 1 exception : mismatches in translation note : fibronectin domain-containing protein 3b product : FAD104 protein_id : NP_775274.1

name	E030011K20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250855 GeneID:208613 MGI:2685410
definition	codon_start : 1 product : hypothetical protein protein_id : XP_149293.4

name	Pld1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059071 CCDS:CCDS17275.1 GeneID:18805 MGI:109585
definition	EC_number : 3.1.4.4 GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005768 - endosome [Evidence ISS]; GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0004630 - phospholipase D activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0016042 - lipid catabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : choline phosphatase 1 product : phospholipase D1 protein_id : NP_032901.2

name	Tnik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250826 GeneID:665113 MGI:1916264
definition	codon_start : 1 product : Traf2 and NCK interacting kinase-like isoform 1 protein_id : XP_001473652.1

name	Tnik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250828 GeneID:665113 MGI:1916264
definition	codon_start : 1 product : Traf2 and NCK interacting kinase-like isoform 2 protein_id : XP_001473671.1

name	Slc2a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13654262 GeneID:20526 MGI:1095438
definition	GO_component : GO:0005903 - brush border [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005355 - glucose transporter activity [Evidence TAS]; GO:0005351 - sugar porter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008643 - carbohydrate transport [Evidence TAS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : liver-type glucose transporter product : solute carrier family 2 (facilitated glucose transporter), member 2 protein_id : NP_112474.1

name	EG624446 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82800614 GeneID:624446 MGI:3648080
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894089.1

name	Eif5a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243942 CCDS:CCDS17277.1 GeneID:208691 MGI:1933735
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006413 - translational initiation [Evidence IEA] codon_start : 1 product : eukaryotic translation initiation factor 5A2 protein_id : NP_808254.1

name	Rpl22l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386010 CCDS:CCDS17278.1 GeneID:68028 MGI:1915278
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] codon_start : 1 product : ribosomal protein L22 like 1 protein_id : NP_080793.1

name	LOC665258 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665258
definition	number : 1 pseudo : _no_value

name	LOC100040527 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040527
definition	number : 1 pseudo : _no_value

clone name	MSMg01-538O22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-410A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132A22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350J21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-301A09.b	B6Ng01-301A09.g
ACC	GA095445	GA095446
length	502	1,112
definition	B6Ng01-301A09.b	B6Ng01-301A09.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(27,707,121 - 27,707,627)	(27,569,139 - 27,570,266)
sequence	actataattcaagcttgtcttgaacttgtagcaatcctcctgcctcaacg ccagccatgcctggactccaaatcaggctggacagacatgtctgtacttg ctcagtttgattccagctaggcattcatatagaaagagacttcagggtta atctttgttgtctggattaaattaccatggaaacacatctctgggtatac ctggcagaatatttccagaaggatttgactaaagaaggaaggcccaccct gataattgaaacatgtctgtacttatacacataggggtatttccaaaaaa ctttgacataagaaggaaggcctctttggaaaataattattattatatgt atctatttattgtgtgagtgggtgggtagatgggtgggcacagtgagctc tcttatgcatggcaaacacatgaaggtcagagtcaatccctctgtttcca cacctggatcccaaggatcaaactcagttgtttgcttcattggccgacac ct	gaattcagctgtcacagactgtcacctcacttctagacaaggggttggag ggctacatcctgcttgggaagctggcaccgccacccaagtctcccaccct ttctaccttgacactgaacacttcagcagaaagcagtcagagttctagac agagacctaaaggtccagccagatgaagtcaaactgtgctggccctgaac ctgcttttccgtgtcacaagaaagccagggcagaaggaactgtgtcttct ttttccggctgtatttgcagtaactcgagttcagtgtatacatgagggta acgtccccactgctttgctcagtgctgaagtggtttgtgaagcgtggccc tgctgaaaggctagacggtgaactagatgtccttctcaggatgcctctca gcctgagaatcccgtggtgtgctcgtaatggaattcggctgctcttataa ttagaaatggagcttgctagtcacacatctggatcagataaacctgcaca aatagcatctcaccagcagcagaaatgccaagcattcgacagcggtgtgg ttacactaccctcacaaataacaaggaatactacttatccatcgaaagga aatgatttggacaggcaggaataaagcttagtttatgcaagacaattttt gtcttgaaaaaatgtttataaaagaaaaactggacctatttttatattaa ttcatataagtatacagaaaagaatcctcatacataataaggcctcaaat agcaattaatccatacaatcttagtgaatggtgagtctcctgttattgat ctggtaaagaggtcataggtacccgtgacatacggcaacatcttacatgc aactatgaactgttctacgataaactaggatcaaagcatcgtatgcactc aagaaatcatcacagccatacactatgtgctgcaagctagcagttagcca cagtcagcacgatatctagggtgggactaaacagaacaggagctcttccc acatcaggtggtcagcagtaactacactgagagcagtctctgacgcttgg gacttaatatctacctactgccctgagattatggaccattaaagatggga ctcttctcctgt
quality values	Open. Hide. 20 37 54 52 58 54 54 54 58 23 13 47 62 62 62 62 62 62 62 62 62 62 54 62 26 24 15 16 13 10 8 16 20 23 21 34 32 41 56 56 62 62 62 62 62 54 56 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 59 43 50 56 56 51 44 30 38 45 49 62 62 59 51 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 59 59 62 62 62 62 62 62 62 62 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 54 62 62 62 59 62 62 54 56 50 54 43 28 40 43 51 16 36 24 45 34 18 18 13 11 7 12 18 18 23 25 13 10 11 13 17 18 18 30 39 34 19 30 18 10 13 23 23 8 13 43 43 41 41 26 51 30 11 13 8 14 13 13 12 10 17 18 25 59 39 39 21 43 41 18 13 5 12 13 14 32 19 32 59 41 43 34 39 26 18 56 44 44 30 20 18 20 17 29 22 15 11 22 20 21 13 14 10 24 22 24 10 15 10 8 9 14 10 9 9 20 28 39 32 17 22 24	Open. Hide. 62 38 38 37 62 41 41 56 62 56 62 51 38 10 25 14 9 16 13 20 27 21 16 15 26 51 56 54 62 59 62 62 62 59 62 62 59 59 51 62 62 62 62 62 62 62 62 62 59 59 62 62 62 46 45 59 43 59 56 34 48 56 43 50 56 54 62 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 59 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 46 46 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 53 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 58 58 58 58 58 58 58 58 58 58 49 54 58 52 58 52 58 58 54 58 58 58 58 58 54 54 54 58 58 58 58 54 58 58 58 58 58 54 54 54 58 52 52 58 54 52 58 54 52 58 58 52 47 58 49 51 46 58 54 51 42 45 58 58 50 49 49 51 54 53 58 58 53 58 58 58 51 50 54 46 51 41 58 54 49 58 58 58 58 50 50 52 40 58 58 53 47 58 50 41 51 54 58 58 48 49 49 49 49 47 51 58 58 53 51 50 37 24 51 51 49 58 58 48 37 48 48 58 35 37 58 47 33 58 50 58 51 51 41 40 33 58 50 41 43 40 50 32 41 50 58 58 50 42 58 53 53 32 58 51 43 40 41 50 37 50 51 41 49 21 23 20 35 54 54 54 51 53 45 40 46 54 52 32 54 54 54 54 32 45 53 32 54 40 37 39 42 38 38 54 37 54 54 54 54 36 40 46 54 51 34 32 54 39 42 46 54 54 54 42 37 39 42 40 45 40 37 39 34 35 29 52 52 45 35 32 41 52 37 42 37 52 32 52 54 49 49 49 25 49 40 32 32 41 45 42 35 36 31 41 26 52 34 41 52 32 32 27 32 8 47 34 34 32 52 37 32 31 28 37 31 29 21 30 31 31 35 31 30 30 31 29 31 28 38 32 45 31 31 31 27 36 31 31 31 32 31 51 25 31 31 28 32 35 36 34 33 26 45 28 26 36 34 30 30 31 34 38 31 46 33 26 42 48 37 34 42 24 30 20 38 33 38 30 24 21 28 32 30 36 32 25 31 43 30 21 24 38 31 31 28 46 31 37 21 31 24 33 35 31 27 24 28 23 35 33 30 19 27 31 31 21 31 31 33 25 30 30 41 15 33 31 26 30 25 11 37 24 30 46 26 29 31 33 13 13 31 21 34 30 47 25 24 31 33 38 32 28 21 34 27 27 18 18 32 34 31 26 25 19 31 47 23 34 35 33 37 24 15 24 26 30 26 25 22 32 21 29 14 31 30 11 10 17 13 15 21 32 34 27 22 18 33 34 32 27 28 32 31 31 32 20 29 28 27 31 10 26 17 15 8 30 32 16 16 9 20 15 32 17 17 21 19 23 31 11 24 11 16 34 48 14 28 20 28 22 34 11 28 20 20 23 20 11 12 21 8 21 13 20 19 26 24 27 13 34 11 11 5 4 3 11 12 21 8 15 8 31 10 26 24 14 8 22 10 26 19 16 19 28 24 26 6 15 16 20 28 5 20 9 26 11 20 8 8 8 6 9 12 23 8 5 5 4 8 12 30 13 22 8 11 11 8 4 12 12 6 3 3 7 3 6 4 18 22 6 5 7 28 12 9 10 16 7 3 1 1 11 6 7 8 10 3 2 2 2 3 3 27 15 7 23 9 19 29 10 5 1 5 4 7 8 9 10 11 16 6 15 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_27707121_27707627
seq2: B6Ng01-301A09.b_46_553 (reverse)

seq1  AGGTGTCGGCCAATGAAGCAAACAACTGAGTTTGATCCTTGGGATCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCGGCCAATGAAGCAAACAACTGAGTTTGATCCTTGGGATCCAGG  50

seq1  TGTGGAAACAGA-GGATTGACTCTGACCTTCATGTGTTTGCCATGCATAA  99
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAACAGAGGGATTGACTCTGACCTTCATGTGTTTGCCATGCATAA  100

seq1  GTGAGCTCACTGTGCCCACCCATCTACCCACCCACTCACACAATAAATAG  149
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTCACTGTGCCCACCCATCTACCCACCCACTCACACAATAAATAG  150

seq1  ATACATATAATAATAATTATTTTCCAAAGAGGCCTTCCTTCTTATGTCAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATAATAATAATTATTTTCCAAAGAGGCCTTCCTTCTTATGTCAA  200

seq1  AGTTTTTTGGAAATACCCCTATGTGTATAAGTACAGACATGTTTCAATTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTGGAAATACCCCTATGTGTATAAGTACAGACATGTTTCAATTA  250

seq1  TCAGGGTGGGCCTTCCTTCTTTAGTCAAATCCTTCTGGAAATATTCTGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTGGGCCTTCCTTCTTTAGTCAAATCCTTCTGGAAATATTCTGCC  300

seq1  AGGTATACCCAGAGATGTGTTTCCATGGTAATTTAATCCAGACAACAAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATACCCAGAGATGTGTTTCCATGGTAATTTAATCCAGACAACAAAG  350

seq1  ATTAACCCTGAAGTCTCTTTCTATATGAATGCCTAGCTGGAATCAAACTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCCTGAAGTCTCTTTCTATATGAATGCCTAGCTGGAATCAAACTG  400

seq1  AGCAAGTACAGACATGTCTGTCCAGCCTGATTTGGAGTCCAGGCATGGCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTACAGACATGTCTGTCCAGCCTGATTTGGAGTCCAGGCATGGCT  450

seq1  GGCGTTGAGGCAGGAGGATTGCTACAAGTTCAAGACAAGCTTGAATTATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTTGAGGCAGGAGGATTGCTACAAGTTCAAGACAAGCTTGAATTATA  500

seq1  GTGAATTC  507
      ||||||||
seq2  GTGAATTC  508

seq1: chr3_27569139_27570266
seq2: B6Ng01-301A09.g_66_1177

seq1  GAATTCAGCTGTCACAGACTGTCACCTCACTTCTAGACAAGGGGTTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTGTCACAGACTGTCACCTCACTTCTAGACAAGGGGTTGGAG  50

seq1  GGCTACATCCTGCTTGGGAAGCTGGCACCGCCACCCAAGTCTCCCACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACATCCTGCTTGGGAAGCTGGCACCGCCACCCAAGTCTCCCACCCT  100

seq1  TTCTACCTTGACACTGAACACTTCAGCAGAAAGCAGTCAGAGTTCTAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTTGACACTGAACACTTCAGCAGAAAGCAGTCAGAGTTCTAGAC  150

seq1  AGAGACCTAAAGGTCCAGCCAGATGAAGTCAAACTGTGCTGGCCCTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCTAAAGGTCCAGCCAGATGAAGTCAAACTGTGCTGGCCCTGAAC  200

seq1  CTGCTTTTCCGTGTCACAAGAAAGCCAGGGCAGAAGGAACTGTGTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTCCGTGTCACAAGAAAGCCAGGGCAGAAGGAACTGTGTCTTCT  250

seq1  TTTTCCGGCTGTATTTGCAGTAACTCGAGTTCAGTGTATACATGAGGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCGGCTGTATTTGCAGTAACTCGAGTTCAGTGTATACATGAGGGTA  300

seq1  ACGTCCCCACTGCTTTGCTCAGTGCTGAAGTGGTTTGTGAAGCGTGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCCCCACTGCTTTGCTCAGTGCTGAAGTGGTTTGTGAAGCGTGGCCC  350

seq1  TGCTGAAAGGCTAGACGGTGAACTAGATGTCCTTCTCAGGATGCCTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAAGGCTAGACGGTGAACTAGATGTCCTTCTCAGGATGCCTCTCA  400

seq1  GCCTGAGAATCCCGTGGTGTGCTCGTAATGGAATTCGGCTGCTCTTATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGAATCCCGTGGTGTGCTCGTAATGGAATTCGGCTGCTCTTATAA  450

seq1  TTAGAAATGGAGCTTGCTAGTCACACATCTGGATCAGATAAACCTGCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATGGAGCTTGCTAGTCACACATCTGGATCAGATAAACCTGCACA  500

seq1  AATAGCATCTCACCAGCAGCAGAAATGCCAAGCATTCGACAGCGGTGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCATCTCACCAGCAGCAGAAATGCCAAGCATTCGACAGCGGTGTGG  550

seq1  TTACACTACCCTCACAAATAACAAGGAATACTACTTATCCATCGAAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTACCCTCACAAATAACAAGGAATACTACTTATCCATCGAAAGGA  600

seq1  AATGATTTGGACAGGCAGGAATAAAGCTTAGTTTATGCAAGACAATTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTTGGACAGGCAGGAATAAAGCTTAGTTTATGCAAGACAATTTTT  650

seq1  GTCTTGAAAAAATGTTTATAAAAGAAAAACTGGACCTATTTTTATATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAAAAAATGTTTATAAAAGAAAAACTGGACCTATTTTTATATTAA  700

seq1  TTCATATAAGTATACAGAAAAGAATCCTCATACATAATAAGGCCTCAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATAAGTATACAGAAAAGAATCCTCATACATAATAAGGCCTCAAAT  750

seq1  AGCAATTAATCCATACAATCTTAGTGAATGGTGAGTCTCCTGTTATTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTAATCCATACAATCTTAGTGAATGGTGAGTCTCCTGTTATTGAT  800

seq1  CTGGTAAAGAGGTCATAGGTACCCGTGACATACGGCAACATCTTACATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAAAGAGGTCATAGGTACCCGTGACATACGGCAACATCTTACATGC  850

seq1  AACTATGAACTGTTCTACGATAAACTAGGATCAAAGCATCGTATGCACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGAACTGTTCTACGATAAACTAGGATCAAAGCATCGTATGCACTC  900

seq1  AAGAAATCATCACAGCCATACACTATGTGCTGCAAGCTAGCAGTTAGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATCATCACAGCCATACACTATGTGCTGCAAGCTAGCAGTTAGCCA  950

seq1  CAGTCAGCCACGATATCTAGGGTGGGACTAAACAGAACAGGAGCTCTTCC  1000
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAG-CACGATATCTAGGGTGGGACTAAACAGAACAGGAGCTCTTCC  999

seq1  CAACCAATCAGGTGGTCAGCAGTAACTACCACTGAGAAGCAGGTCTCTGA  1050
      ||    |||||||||||||||||||||| ||||||| |||| ||||||||
seq2  CA---CATCAGGTGGTCAGCAGTAACTA-CACTGAG-AGCA-GTCTCTGA  1043

seq1  CGCCTGGGAACTTAATATCCTAACCTAACTGCCCTGAGGAATAATGACAC  1100
      ||| |||| ||||||||||   |||| |||||||||||  || |||   |
seq2  CGCTTGGG-ACTTAATATC--TACCT-ACTGCCCTGAG--ATTATGGACC  1087

seq1  AATAAAGAATGGGGAACTCTTCTCCTGT  1128
      | ||||| |||||  |||||||||||||
seq2  ATTAAAG-ATGGG--ACTCTTCTCCTGT  1112

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BAC

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Alignment Information