BAC Information

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BAC

Clone NameB6Ng01-301B15
Chromosome3 (Build37)
Map Location 12,857,591 - 12,858,268
singlet/doubletsinglet
Overlap geneEG668033
Upstream geneEG621965, LOC100039798
Downstream geneLOC668037, LOC100039823, LOC100039861, 0710005M24Rik, LOC100041679, LOC100041667, LOC100039882
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301B15.bB6Ng01-301B15.g
ACCGA095502GA095503
length1,1331,138
definitionB6Ng01-301B15.b B6Ng01-301B15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgatgaatattaagatgaaatttgtgggtaaagcatttgtca
cattcactacatttataaattttctcttctgcatgaattccctgatggat
actaagatcgatctgatgggtaaagcatttgtcacttttactacttctgt
aacgtttcttttcatgataaattctctgctgactttgaagtttgtctctc
tgggtaagatatttgtcaaatttactacatttgtaagggttcactccagt
attatttcgtttcaccatgactttatgtttagaaataaaagccttctcag
attctgcatttccgttgtgttttttcttctgcatgtggattccctgattg
agactaatggaagaaaacaaagttaaactgtttacagagtcattgtattt
gcaaacttttttattgttcctgggcttaagtcttttttggttcgaaaatt
gaagagcatcagaggtgtgattagttttgtaaggtgtacattgggaggct
tcaagtatcacattgctaagtttgtcccatttagaagacttctcttgaat
attcatgtgttcatggacaatgtactggctgtcttgatccaagaccttct
catactttccacatatgcaatgattttctgaaaaaaagtggggaggggca
attagaggtgacatgaattacttatataaggagtaagtgattcaataatc
agtgatctcatggattcgtactctcaagagaggtttttctcctttttttg
aatcattacatgtatcctcaaaagaacttcaaatatggtctatatcaaat
gattggaaatgatagtaacctgctaaatttcagtttcaaattggacatca
tacccacctcaaatataataacccagaattgctcctgtgttaaggaaaaa
gagggaaaaaatggaaaagaggctgaaggtaagccatccagagactggac
caaagagatgcagatccaagccaacattagactgagcaggggctacatga
gagttaagggaagtactgaagaagctgacggctttgcactggtgtagaga
acaacatatcaaacacaagacatacaagcttcgaggtaaatccaccaaca
agtgtacacatgaagtacaaatgctccagcttt
gaattcatacaggagagaaaccttacaaatgcagtgaatgtgacaaatgc
tttaccaaacaatccaaacttagtattcatcagagaattcatacaggaga
gaaaccttacaaatgcagtgaatgtggcaaatgctttactgaaaaaagca
gtctgagaattcatcagagaattcatacaggagagaaaccttacaaatgc
agtgaatgtggcaaatgctttactgaaaaaagcagtctgagaattcatca
gagaattcatacaggagagaaaccttacaaatgcagtgaatgtgacaaat
gctttacccaacaatcctatcttagtattcatcagagaattcatacagga
gagaaaccttacaaatgcagtgaatgtgacaaatgctttaccaaacaatc
caatcttagtattcatcagagaattcatacaggagagaaaccttacaaat
gcagtgaatgtgacaaatgctttacccaacaatcccatcttagtattcat
cagagaattcatacaggagagagaccttacaaatgtagtgaatgtgacaa
atgctttacccaaaaatcctatcttaatattcatcagagaattcatgcag
gagagaaaccttacaaatgcagtgaatgtgacaaatgctttactacaaaa
ggcaatctgataattcatcagagaattcatacaagagagaaaccttacaa
atgtagtgaatgtgacaaatgctttacccagaaatcccaacttagtattc
atcagaaaattcatacaggagagaaaccttacaaatagattgtatgtgac
aaatacaatactcacaatgtcagtcttagaaatcatcagttatttcatac
agtagagaatctttataaatgaagtaaatgaggcaatcctttaccaagat
atatcatctcaaaattcattagaggatacttagagaagaacaaactttca
aatatattttagtatgatctttcttttggcctagtcctagactgtaacag
tgatactacagggtagaaacttaactcatgcatgatgagaaatagcttga
ctcatttcagtcagaagagaacatctaggacctttttagctaagtatttt
ctgttggaagttgaatcttgacaccctgaggctccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_12857591_12858268
seq2: B6Ng01-301B15.g_548_1204

seq1  ATCCCATCTTAGTATTCATCAGAGAATTCATACAGGAGAGAAACCTTACA  50
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATCCCATCTTAGTATTCATCAGAGAATTCATACAGGAGAGAGACCTTACA  50

seq1  AATGCAGTGAATGTGAAAAATGCTTTAATGAAAAAAACATTCTGAAAATT  100
      |||| ||||||||||| ||||||||||   |||||  |  ||| || |||
seq2  AATGTAGTGAATGTGACAAATGCTTTACCCAAAAATCCTATCTTAATATT  100

seq1  CATCAGAGAATTCATACAGGAGAGAGACCTTACAAATGTAGTGAATGTGA  150
      ||||||||||||||| ||||||||| |||||||||||| |||||||||||
seq2  CATCAGAGAATTCATGCAGGAGAGAAACCTTACAAATGCAGTGAATGTGA  150

seq1  CAAATGCTTTTCCCGAAAATTCCATCTTGGTATTTATCAGAGAATTCATA  200
      |||||||||| |   ||||  | ||||    ||| |||||||||||||||
seq2  CAAATGCTTTACTACAAAAGGCAATCTGATAATTCATCAGAGAATTCATA  200

seq1  CAGGAAAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACCCAG  250
      || || ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACCCAG  250

seq1  AAATCCCATCTTAGTATTCATCAGAAAATTCATACAGGAGAGAAACCTTA  300
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCAACTTAGTATTCATCAGAAAATTCATACAGGAGAGAAACCTTA  300

seq1  CAAATAGAATGTATGTGACAAATACAATACTCACAATGTCAGTCTTAGAA  350
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGATTGTATGTGACAAATACAATACTCACAATGTCAGTCTTAGAA  350

seq1  ATCATCAGTTATTTCATACAGTAGAGAATCTTTATAAATGAAGTGAACGA  400
      |||||||||||||||||||||||||||||||||||||||||||| || ||
seq2  ATCATCAGTTATTTCATACAGTAGAGAATCTTTATAAATGAAGTAAATGA  400

seq1  GACAATTCTTTACCAAGATATATCATCTCAAAATTCATTAGAGAATACTT  450
      | |||| |||||||||||||||||||||||||||||||||||| ||||||
seq2  GGCAATCCTTTACCAAGATATATCATCTCAAAATTCATTAGAGGATACTT  450

seq1  AGAGAAG-ACAAACTTTTCAAATATATTGTAGGTATGAATCCTTTCCTTT  499
      ||||||| |||||| ||||||||||||| || ||||| |||  || ||||
seq2  AGAGAAGAACAAAC-TTTCAAATATATTTTA-GTATG-ATC--TTTCTTT  495

seq1  TGGCCTATTTCCTAGACTGTAACAGTGAATACTTACAGGCTAGAAACTTA  549
      |||||||  |||||||||||||||||| |||| |||||| ||||||||||
seq2  TGGCCTA-GTCCTAGACTGTAACAGTG-ATAC-TACAGGGTAGAAACTTA  542

seq1  ACTCATGCATTATATGAAGAAATATCTTTGACTTCATTTCAGGTCAG-AG  598
      |||||||||| ||    ||||||| | ||||| |||||||| ||||| ||
seq2  ACTCATGCATGAT---GAGAAATAGC-TTGAC-TCATTTCA-GTCAGAAG  586

seq1  AGAACATCTAAGAACTTTTTAGGGTAAAGTA-TTTCTGTTGGGGAAAATG  647
      |||||||||| || |||||||  |  ||||| ||||||||||     | |
seq2  AGAACATCTAGGACCTTTTTA--GCTAAGTATTTTCTGTTGG-----AAG  629

seq1  TTGTATTCTTGACAACACTTGAGGCTCCACA  678
      ||| | ||||||||   | ||||||||||||
seq2  TTG-AATCTTGACA--CCCTGAGGCTCCACA  657