BAC Information

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BAC

Clone NameB6Ng01-301B17
Chromosome3 (Build37)
Map Location 132,799,018 - 132,950,629
singlet/doubletdoublet
Overlap gene9130221D24Rik
Upstream geneDkk2, LOC100039018, EG433653, LOC668857, Scye1, A630047E20Rik, LOC668858, Npnt, Gstcd, Ints12
Downstream genePpa2, E130014J05Rik, EG620205, LOC100039168, LOC668862, LOC100039199, Cxxc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301B17.bB6Ng01-301B17.g
ACCGA095506GA095507
length1,091455
definitionB6Ng01-301B17.b B6Ng01-301B17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,949,539 - 132,950,629)(132,799,018 - 132,799,474)
sequence
gaattctggcaggttgatctctcacttcctcatgaacaatggtgcatgag
aaatatggaggaaaatttcacttataagctcctatatgcccaaccaccaa
agcagagagtaattaaagagcttttaagctaccagagtgtactcctccct
tagcacagtgttataattcacaagcagcttttacatcacaccatctcctg
acaaaacctttgtcaccccggctgccctttcaaggtgagcaaagacagtc
taatcctctgggagagagggaccctgagagccaatttcctgcccttccat
tcttactgggagttgcatagggctttcttctgaatgcaggttgccatagt
tacagttctgtttatttagatcctctaacaggttcctttaagtagttaat
attgtgtaccaccaatttctatatttaaagtaattcctgtcctaaagaaa
tctcattttctccctgggtatctcaaaacagcagtggctgtaataaagag
tctaggattacatgaagcaatcttccacttgtcacagaaggaacaaacct
gagaaagtcttgagttatccaagtccttggtttcagttgttaaaaatccc
aggagcagggtcagatgtgctggcgcacaactttaatctcagcacttggg
aggcagaggcagatggatctctatgagttccaggagagccaaggccacat
agggaaaccctgtctcaaataaacaaaaattaaattaaaaaaattttttt
aaatcccaggatcagccctacccctgcctttccaccaggaactcttgcct
tcgtgctgggatttctgctcggcctctcaacacacccaccttactcttta
actttacctgcatttctgtcacttgcaatggagacttattttccaggaaa
taaatcacttcctttgattcaaagcatcctcaaggctcagcgagtcggct
ccagcatccatcatctgtggcactgagaccaggaaccgccccacacacag
aaggctcaagaatgaatcctaatgagctgaacagcacctcaccctccttt
ccagaaataatctgctgagctttggggggcttgttgtgttg
tccagagtaagagtaacctcaggattagagttcttcatcagataaaaggg
aaccaccagagtgaagcagatcagaaaactctgggaagaatttctgcagg
aagacacaattgatagaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gagagagagagagagactgatagagaccgagagagagagagagagagaga
gactgagagacagagagacagagatttttctgtttattttttatatactg
agagagactgagagaatgtgtatacatgttctgctcacataagggcatgc
acatacctatgcgtgcattggcagaggacagagggcccacgtcttcctcc
atcccttttcaccttactttatgaagcagggtgtctcattgtacctcttt
tttactcagtggccacactagttggctgatcagtctcccaggatctgggt
ctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132949539_132950629
seq2: B6Ng01-301B17.b_48_1138 (reverse)

seq1  CAACAACAACAAAACCCCCAAAGCTCAGCAGATTA-TTCTGGAAAGGAGG  49
      |||| |||||||  ||||||||||||||||||||| ||||||||||||||
seq2  CAAC-ACAACAAGCCCCCCAAAGCTCAGCAGATTATTTCTGGAAAGGAGG  49

seq1  GTGA-GTGCTG-TCAGCTCATTAGGATTCATTCTTGAGCCTTCTTGTGTG  97
      |||| |||||| ||||||||||||||||||||||||||||||| ||||||
seq2  GTGAGGTGCTGTTCAGCTCATTAGGATTCATTCTTGAGCCTTC-TGTGTG  98

seq1  TGGGGCGGTTCCTGGTCCTCAGTGCCACAGATGATGGATGCTGGAGCCGA  147
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGGGGCGGTTCCTGGT-CTCAGTGCCACAGATGATGGATGCTGGAGCCGA  147

seq1  CTCGCTGAGCCTTGAGGATGCTTTGAATCAAAGGAAGTGATTTATTTCCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTGAGCCTTGAGGATGCTTTGAATCAAAGGAAGTGATTTATTTCCT  197

seq1  GGAAAATAAGTCTCCATTGCAAGTGACAGAAATGCAGGTAAAGTTAAAGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAAGTCTCCATTGCAAGTGACAGAAATGCAGGTAAAGTTAAAGA  247

seq1  GTAAGGTGGGTGTGTTGAGAGGCCGAGCAGAAATCCCAGCACGAAGGCAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTGGGTGTGTTGAGAGGCCGAGCAGAAATCCCAGCACGAAGGCAA  297

seq1  GAGTTCCTGGTGGAAAGGCAGGGGTAGGGCTGATCCTGGGATTTAAAAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCTGGTGGAAAGGCAGGGGTAGGGCTGATCCTGGGATTTAAAAAA  347

seq1  ATTTTTTTAATTTAATTTTTGTTTATTTGAGACAGGGTTTCCCTATGTGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTAATTTAATTTTTGTTTATTTGAGACAGGGTTTCCCTATGTGG  397

seq1  CCTTGGCTCTCCTGGAACTCATAGAGATCCATCTGCCTCTGCCTCCCAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTCTCCTGGAACTCATAGAGATCCATCTGCCTCTGCCTCCCAAG  447

seq1  TGCTGAGATTAAAGTTGTGCGCCAGCACATCTGACCCTGCTCCTGGGATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGATTAAAGTTGTGCGCCAGCACATCTGACCCTGCTCCTGGGATT  497

seq1  TTTAACAACTGAAACCAAGGACTTGGATAACTCAAGACTTTCTCAGGTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAACTGAAACCAAGGACTTGGATAACTCAAGACTTTCTCAGGTTT  547

seq1  GTTCCTTCTGTGACAAGTGGAAGATTGCTTCATGTAATCCTAGACTCTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTCTGTGACAAGTGGAAGATTGCTTCATGTAATCCTAGACTCTTT  597

seq1  ATTACAGCCACTGCTGTTTTGAGATACCCAGGGAGAAAATGAGATTTCTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGCCACTGCTGTTTTGAGATACCCAGGGAGAAAATGAGATTTCTT  647

seq1  TAGGACAGGAATTACTTTAAATATAGAAATTGGTGGTACACAATATTAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAGGAATTACTTTAAATATAGAAATTGGTGGTACACAATATTAAC  697

seq1  TACTTAAAGGAACCTGTTAGAGGATCTAAATAAACAGAACTGTAACTATG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAAGGAACCTGTTAGAGGATCTAAATAAACAGAACTGTAACTATG  747

seq1  GCAACCTGCATTCAGAAGAAAGCCCTATGCAACTCCCAGTAAGAATGGAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTGCATTCAGAAGAAAGCCCTATGCAACTCCCAGTAAGAATGGAA  797

seq1  GGGCAGGAAATTGGCTCTCAGGGTCCCTCTCTCCCAGAGGATTAGACTGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGAAATTGGCTCTCAGGGTCCCTCTCTCCCAGAGGATTAGACTGT  847

seq1  CTTTGCTCACCTTGAAAGGGCAGCCGGGGTGACAAAGGTTTTGTCAGGAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTCACCTTGAAAGGGCAGCCGGGGTGACAAAGGTTTTGTCAGGAG  897

seq1  ATGGTGTGATGTAAAAGCTGCTTGTGAATTATAACACTGTGCTAAGGGAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTGATGTAAAAGCTGCTTGTGAATTATAACACTGTGCTAAGGGAG  947

seq1  GAGTACACTCTGGTAGCTTAAAAGCTCTTTAATTACTCTCTGCTTTGGTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACACTCTGGTAGCTTAAAAGCTCTTTAATTACTCTCTGCTTTGGTG  997

seq1  GTTGGGCATATAGGAGCTTATAAGTGAAATTTTCCTCCATATTTCTCATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGCATATAGGAGCTTATAAGTGAAATTTTCCTCCATATTTCTCATG  1047

seq1  CACCATTGTTCATGAGGAAGTGAGAGATCAACCTGCCAGAATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTGTTCATGAGGAAGTGAGAGATCAACCTGCCAGAATTC  1091

seq1: chr3_132799018_132799474
seq2: B6Ng01-301B17.g_66_526

seq1  GAATTCTCCAGAGTAAGAGTAACCTCAGGATTAGAGTTCTTCATCAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGAGTAAGAGTAACCTCAGGATTAGAGTTCTTCATCAGATA  50

seq1  AAAGGGAACCACCAGAGTGAAGCAGATCAGAAAACTCTGGGAAGAATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAACCACCAGAGTGAAGCAGATCAGAAAACTCTGGGAAGAATTTC  100

seq1  TGCAGGAAGACACAATTGATAGAAGTGTGTGTGTGTGTGTGTGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAAGACACAATTGATAGAAGTGTGTGTGTGTGTGTGTGTGTGTGT  150

seq1  GTGTGTGAGAGAGAGAGAGAGACAGAGAGAGACAGAGAGAGAGAGAGAGA  200
      ||||||||||||||||||||||| || |||||| ||||||||||||||||
seq2  GTGTGTGAGAGAGAGAGAGAGACTGATAGAGACCGAGAGAGAGAGAGAGA  200

seq1  GAGAGAGACAGAGAGACAGAGAGACAGAGAAAGACAGAGATA---GAGAG  247
      ||||||||| ||||||||||||||||||||          ||      | 
seq2  GAGAGAGACTGAGAGACAGAGAGACAGAGATTTTTCTGTTTATTTTTTAT  250

seq1  AGACAGAGAGAGACAGAGAGAATGTGTATACATG-TCTGCTCACATAAGG  296
      | || ||||||||| ||||||||||||||||||| |||||||||||||||
seq2  ATACTGAGAGAGACTGAGAGAATGTGTATACATGTTCTGCTCACATAAGG  300

seq1  GCATGCACATACCCATGCGTGCACTGGCAGAGGACAGAGGGCCCAGGTCT  346
      ||||||||||||| ||||||||| ||||||||||||||||||||| ||||
seq2  GCATGCACATACCTATGCGTGCATTGGCAGAGGACAGAGGGCCCACGTCT  350

seq1  TCCTCCATCCCTTTTCACCTTACTTTATGAAGCAGGGTGTCTCATTGAAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCTCCATCCCTTTTCACCTTACTTTATGAAGCAGGGTGTCTCATTGTAC  400

seq1  CTCGAGCTTACCAAGTGGCCACACTAGTTGGCTGAGCAGTCTCCCAGGAT  446
      |||    ||||  |||||||||||||||||||||| ||||||||||||||
seq2  CTCTTTTTTACTCAGTGGCCACACTAGTTGGCTGATCAGTCTCCCAGGAT  450

seq1  CTGGGTCTCTA  457
      |||||||||||
seq2  CTGGGTCTCTA  461