BAC Information

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BAC

Clone NameB6Ng01-301E02
Chromosome3 (Build37)
Map Location 91,579,523 - 91,580,662
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545541, LOC635737, EG668174, LOC668179, LOC635756, 4930529C04Rik, 9130204L05Rik, LOC100042463
Downstream genePglyrp3, EG619750, Lor, A030004J04Rik, Sprr2a, LOC100042999, LOC545543, LOC100043005, LOC545545, LOC100042514, LOC619984, Sprr2b, Sprr2c, Sprr2d, Sprr2e, Sprr2f, Sprr2g, Sprr2h, Sprr2i, Sprr2j, LOC100043022, Sprr2k, Sprr1b, Sprr3, LOC100042575, Sprr1a, Sprr4, LOC100042581, Ivl, Smcp, Lce1a1, Lce1b, LOC620325, Lce1a2, Lce1c, Lce1d, LOC100043062, Lce1e, Lce1f, LOC668264, Lce1g, Lce1h
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301E02.bB6Ng01-301E02.g
ACCGA095614GA095615
length1,1681,133
definitionB6Ng01-301E02.b B6Ng01-301E02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactaaagaataccaaatgcctgagaagcacctgaaataaat
tttcacatccttaatcatcagggaaatgcaaatcaaaagaacactgattt
tgcacctcacacctgtcaggatggctaagatcaaaaattcagttgacagc
agactctgtcaaggatatatatggagaaactctcctccaatgttggtggg
attgcaagcttgtgcaaccactctggaaatctgtctggtgattcctcata
aaattggacatagcactactggaggatccagcaatacctctcctgggcat
ataaccaaaagatgttccaaatgttaataagtacacattcttcactatgt
tcatagcagctttatttataatagcctgaagctggaaagatcccacatgt
ccctcaacagaggaatggaaatagaaaatgtggtacatttacacaatgga
gtactactcagcaattaaaaacaaagaatttaggaagttcttaggcaaat
agatggatctgtagggtacaatcctgagtgaggtaacccaatcacaaaag
aactcacatgatatgcattcactgacaagtagatatttgcccagaaacag
aatacccaagatacaatttgcaacacatatgaaagtcaaggagaaggaag
acaaacatgtggatactttgtccctccttagaatggggaacaaaataccc
atggaaggaattacagagacaatgtttggagctgagacaaaagtatggat
cacccagacaccgccccacccggggatccatcccatattcagccaccaat
ctcagacactaatgcaaatgccagcaaaatttgctgaaaggaccctgata
tagctgtctctagtaagactatgccagtgacttgcaaatactaagtgggt
gctcacagtcatctattgatggaacacaggcccctaatagaggagctaga
gaaagtacccaagagccgaagcatctgcattctatatggaacaacaatat
gaactacccatatcccaagagctgtgactcttagcttcatatgtagcaag
atgcctagtcagcatcattgggaaagaagtccctgttctagaaaccttaa
tagcaataacgtcgcatgcgtagctaatgcagtggacgagcagacatgta
gaatgggtataatagaga
gaattcttattgctgtatcaagacagacagaggatgtctacaggaatttt
ctgtgcagaggtgttcttgctttacccctccatgaattctactccctaaa
ctgacacagggattgttagcaaatcatgtgtcaggtacaaagtgtattag
gcaaggtgtcccagcaagagaatgtaagatctgcagctggtggtgctctc
agactcactaagatcaatcaccagtacacttaaccccatcacatctatta
ccaaatgtttattacctagaaagttccaccactttaggagtccatactgg
cattttcttctcaggatttcccagtcagtagcttcagtgggagtcactca
ttagttgcctccaggggaagtaatgtggagaaattaacttagaatactgg
agggaacattcaattctctgcctgagacgtgtgttacaattccttgtagt
tcctgtgtttgcagcctctgcaacattaaaagccattaaccttttgccag
gccagttttcaaggaagatgccttttattcaggctaatttttatagacaa
atgttggatacttctagacaaactaactgtcttatttttctgcaaaacag
agtcctagctctgaatttgaaaggctggcagaaccaaattgcaaagtatt
aacctctgtttagtatgtttcttcatgagcactaacctctacacttttat
actcaaatgggaatcttgggtcagttttactatgcatttgcattctgctc
aatcactgtgcaccctaatcctttcccaggatattatcaatgctaagagt
catctttgttccaggaagtacatgaaagtcctttaagtagactatagaat
gaaccaaaggatcacagcattgaagaggttttggatataagaagaatggg
aatgctgtaatataggaagatgaacaacaatgcttgtgaacattagcatt
atcacatcgaagtgtctgggcctttgaagagggtggacatagatatgaca
gcactccttaagcaagaagtctgcccaccttttcttatatccacagtgtt
tcagaatttattgaacagacactgaaatatgtttggggatctattgtata
gaaaaaaagtctttctcacagtttctcaatgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_91579523_91580662
seq2: B6Ng01-301E02.g_70_1202

seq1  GAATTCTTATTGCTGTATCAAGACAGACAGAGGATGTCTACAGGAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTGCTGTATCAAGACAGACAGAGGATGTCTACAGGAATTTT  50

seq1  CTGTGCAGAGGTGTTCTTGCTTTACCCCTCCATGAATTCTACTCCCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAGAGGTGTTCTTGCTTTACCCCTCCATGAATTCTACTCCCTAAA  100

seq1  CTGACACAGGGATTGTTAGCAAATCATGTGTCAGGTACAAAGTGTATTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACAGGGATTGTTAGCAAATCATGTGTCAGGTACAAAGTGTATTAG  150

seq1  GCAAGGTGTCCCAGCAAGAGAATGTAAGATCTGCAGCTGGTGGTGCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTGTCCCAGCAAGAGAATGTAAGATCTGCAGCTGGTGGTGCTCTC  200

seq1  AGACTCACTAAGATCAATCACCAGTACACTTAACCCCATCACATCTATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCACTAAGATCAATCACCAGTACACTTAACCCCATCACATCTATTA  250

seq1  CCAAATGTTTATTACCTAGAAAGTTCCACCACTTTAGGAGTCCATACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGTTTATTACCTAGAAAGTTCCACCACTTTAGGAGTCCATACTGG  300

seq1  CATTTTCTTCTCAGGATTTCCCAGTCAGTAGCTTCAGTGGGAGTCACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTTCTCAGGATTTCCCAGTCAGTAGCTTCAGTGGGAGTCACTCA  350

seq1  TTAGTTGCCTCCAGGGGAAGTAATGTGGAGAAATTAACTTAGAATACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTGCCTCCAGGGGAAGTAATGTGGAGAAATTAACTTAGAATACTGG  400

seq1  AGGGAACATTCAATTCTCTGCCTGAGACGTGTGTTACAATTCCTTGTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACATTCAATTCTCTGCCTGAGACGTGTGTTACAATTCCTTGTAGT  450

seq1  TCCTGTGTTTGCAGCCTCTGCAACATTAAAAGCCATTAACCTTTTGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTTTGCAGCCTCTGCAACATTAAAAGCCATTAACCTTTTGCCAG  500

seq1  GCCAGTTTTCAAGGAAGATGCCTTTTATTCAGGCTAATTTTTATAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTTTCAAGGAAGATGCCTTTTATTCAGGCTAATTTTTATAGACAA  550

seq1  ATGTTGGATACTTCTAGACAAACTAACTGTCTTATTTTTCTGCAAAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGATACTTCTAGACAAACTAACTGTCTTATTTTTCTGCAAAACAG  600

seq1  AGTCCTAGCTCTGAATTTGAAAGGCTGGCAGAACCAAATTGCAAAGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTAGCTCTGAATTTGAAAGGCTGGCAGAACCAAATTGCAAAGTATT  650

seq1  AACCTCTGTTTAGTATGTTTCTTCATGAGCACTAACCTCTACACTTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGTTTAGTATGTTTCTTCATGAGCACTAACCTCTACACTTTTAT  700

seq1  ACTCAAATGGGAATCTTGGGTCAGTTTTACTATGCATTTGCATTCTGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAATGGGAATCTTGGGTCAGTTTTACTATGCATTTGCATTCTGCTC  750

seq1  AATCACTGTGCACCCTAATCCTTTCCCAGGATATTATCAATGCTAAGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTGTGCACCCTAATCCTTTCCCAGGATATTATCAATGCTAAGAGT  800

seq1  CATCTTTGTTCCAGGAAGTACATGAAAGTCCTTTAAGTAGACTATAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTGTTCCAGGAAGTACATGAAAGTCCTTTAAGTAGACTATAGAAT  850

seq1  GAACCAAAGGATCACAGCATTGAAGAGGTTTTGGATATAAGAAGAATGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAAGGATCACAGCATTGAAGAGGTTTTGGATATAAGAAGAATGGG  900

seq1  AATGCTGTAATATAGGAAGATGAACAACAATGCTTGTGAACATTAGCATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGTAATATAGGAAGATGAACAACAATGCTTGTGAACATTAGCATT  950

seq1  ATCACATCGAAGTGTCTGG--CCTTGAAGAGGGTGGACATAGATATGACC  998
      |||||||||||||||||||  | ||||||||||||||||||||||||| |
seq2  ATCACATCGAAGTGTCTGGGCCTTTGAAGAGGGTGGACATAGATATGA-C  999

seq1  AGCACTCC-TAAGCAAGAGTTCTGCCCACC-TTTCTTATATCCCACCAGT  1046
      |||||||| |||||||||  |||||||||| ||||||||||||   ||||
seq2  AGCACTCCTTAAGCAAGAAGTCTGCCCACCTTTTCTTATATCC--ACAGT  1047

seq1  GTTTCAGAAATTTATTGAAACAGACACTGAAATTATGTTTGGGGATCTAA  1096
      ||||||| ||||||||| |||||||||||||| |||||||||||||||| 
seq2  GTTTCAG-AATTTATTG-AACAGACACTGAAA-TATGTTTGGGGATCTAT  1094

seq1  TGGTAATAG-AAAAAAGTCTTTCTCCAACAAGTGTTCTCAATGTT  1140
      ||   |||| |||||||||||||||  || ||| |||||||||||
seq2  TG--TATAGAAAAAAAGTCTTTCTC--AC-AGT-TTCTCAATGTT  1133