BAC Information

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BAC

Clone NameB6Ng01-301E22
Chromosome3 (Build37)
Map Location 7,782,652 - 7,783,491
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667801, Pkia, LOC667807, 3110050N22Rik, Il7
Downstream geneLOC620822, LOC633072, LOC545500, LOC620966, Stmn2, Hey1, LOC100039504
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301E22.bB6Ng01-301E22.g
ACCGA095652GA095653
length999845
definitionB6Ng01-301E22.b B6Ng01-301E22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtctacttccttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtgctct
ctttgtcttattgtcggtgtcttttgccttgcagaagctttccaacttta
tgaggtcccatttatttattctcgatattacagcacaagccattgctgtt
ctattcacgaatttttcccctgtgcccatatcttcgagtcttttccttac
tttctcctctataagtttcagtgtctggttttatgtggacttccttaatc
cacttagattagaccatagtacaagtagataggaatggatcaattcccat
tcttctacatgataacaaccagttgtgggagcaccatttgttgaaaatgc
tgtcttttttccactggatggttttagctcccttgtcaaagatcaagtaa
ccataggtgtgtgggttcatctctgggtcttcaattctgttccattggtc
tacttgtctgtccctataccagtaccatgcagtttttatcacaattgctc
tgtagtacatctttagatcgggcatggtgattccaccagaggttctttta
tccttgagaagagtttttgctatcctaggtttttttgttattccagatga
atttgcagattgccctttctaattcgttgaagaattgttgcgcgcgctca
actggccaggaagaacgacgctgctacaggatccttctgcacacgtttat
tcagtcctgtttcttctttctctatatttcccttgtttatatctcccttg
tttatatctctcccttgtttatatctcccttgaaccctgggcctctcact
ctcttatactctcagttcccatccatgcacagcaggccacgccctctccg
ccagtcacgaggcttcagctaatcagggcagcaggggcaaatctccacc
gaattcaaataagaggattagttcatgataatcggttgttgatatctcag
caggaaagcttggcattgcagaaacctagcaggctcttcacagggcacct
tcttacaatggaaagacagtgtcatgtacactcccatttttaaccataca
atacaaaggttattgaaaccttgctaagaggtagctcttttggattcaca
ggtgaagcagaaaatatttggtgaattctacatcccaggaagtattctta
gataggaaaagacaggcatactgttttctgtttgtttgtaggagtctgtg
tcctacagaagtttggttatatttcaacataaaggagccttgaagaaatt
ttaaagtaggaagatttattttttattttacaattttttattaaatattt
tcttcattacatttcaaatgctatcccaaaagtcccctatacactccccc
caccctgctcaccaacccacccactatcgcttcctggccctggcattccc
ctgtactggggcatatgatcttcacaagaccaaggacctctcctcccatt
gatggccaactaggctatccacgggtacatatgtaactagagacacagtt
ctggggtggggggactggttagttcatattgttgatcctcctataaggtt
gtagacccctttaactcctctggtactttctctagctccttcattagggg
ccctgtgtgccatccaatacatgactgtgagaattcgactcctgtatctg
ccagagactggcatatgctatcaagagatagttatatcaaggtcctgtca
ggatcattcttttgtggacatattcaatagtgctctcgggtttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_7782652_7783491
seq2: B6Ng01-301E22.g_65_909

seq1  GAATTCAAATAAGAGGATTAGTTCATGATAATCGGTTGTTGATATCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAAGAGGATTAGTTCATGATAATCGGTTGTTGATATCTCAG  50

seq1  CAGGAAAGCTTGGCATTGCAGAAACCTAGCAGGCTCTTCACAGGGCACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGCTTGGCATTGCAGAAACCTAGCAGGCTCTTCACAGGGCACCT  100

seq1  TCTTACAATGGAAAGACAGTGTCATGTACACTCCCATTTTTAACCATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAATGGAAAGACAGTGTCATGTACACTCCCATTTTTAACCATACA  150

seq1  ATACAAAGGTTATTGAAACCTTGCTAAGAGGTAGCTCTTTTGGATTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAGGTTATTGAAACCTTGCTAAGAGGTAGCTCTTTTGGATTCACA  200

seq1  GGTGAAGCAGAAAATATTTGGTGAATTCTACATCCCAGGAAGTATTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGCAGAAAATATTTGGTGAATTCTACATCCCAGGAAGTATTCTTA  250

seq1  GATAGGAAAAGACAGGCATACTGTTTTCTGTTTGTTTGTAGGAGTCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGAAAAGACAGGCATACTGTTTTCTGTTTGTTTGTAGGAGTCTGTG  300

seq1  TCCTACAGAAGTTTGGTTATATTTCAACATAAAGGAGCCTTGAAGAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACAGAAGTTTGGTTATATTTCAACATAAAGGAGCCTTGAAGAAATT  350

seq1  TTAAAGTAGGAAGATTTATTTTTTATTTTACAATTTTTTATTAAATATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAGGAAGATTTATTTTTTATTTTACAATTTTTTATTAAATATTT  400

seq1  TCTTCATTACATTTCAAATGCTATCCCAAAAGTCCCCTATACACTCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTACATTTCAAATGCTATCCCAAAAGTCCCCTATACACTCCCCC  450

seq1  CACCCTGCTCACCAACCCACCCACTATCGCTTCCTGGCCCTGGCATTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGCTCACCAACCCACCCACTATCGCTTCCTGGCCCTGGCATTCCC  500

seq1  CTGTACTGGGGCATATGATCTTCACAAGACCAAGGACCTCTCCTCCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGGGGCATATGATCTTCACAAGACCAAGGACCTCTCCTCCCATT  550

seq1  GATGGCCAACTAGGCTATCCACGGGTACATATGTAACTAGAGACACAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCAACTAGGCTATCCACGGGTACATATGTAACTAGAGACACAGTT  600

seq1  CTGGGGTGGGGGGACTGGTTAGTTCATATTGTTGATCCTCCTATAAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTGGGGGGACTGGTTAGTTCATATTGTTGATCCTCCTATAAGGTT  650

seq1  GTAGACCCCTTTAACTCCTCTGGTACTTTCTCTAGCTCCTTCATTAGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCCCTTTAACTCCTCTGGTACTTTCTCTAGCTCCTTCATTAGGGG  700

seq1  CCCTGTGTTCCATCCAATAGATGACTGTGAGAATTCCACTTCTGTATTTG  750
      |||||||| |||||||||| |||||||||||||||| ||| |||||| ||
seq2  CCCTGTGTGCCATCCAATACATGACTGTGAGAATTCGACTCCTGTATCTG  750

seq1  CCAGAGACTGGCATAGCCTAACAAGAGATAGTTATATCAGGGTCCTGTCA  800
      |||||||||||||||  ||| |||||||||||||||||| ||||||||||
seq2  CCAGAGACTGGCATATGCTATCAAGAGATAGTTATATCAAGGTCCTGTCA  800

seq1  GGATAAT--CTTTCTGG-CATATTCAATAGTG-TCT-GGGTTTAG  840
      |||| ||   ||| ||| |||||||||||||| ||| ||||||||
seq2  GGATCATTCTTTTGTGGACATATTCAATAGTGCTCTCGGGTTTAG  845