BAC Information

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BAC

Clone NameB6Ng01-302C13
Chromosome3 (Build37)
Map Location 18,784,521 - 18,785,621
singlet/doubletsinglet
Overlap genenone
Upstream geneCypt12, LOC545508, Bhlhb5, Cyp7b1, LOC622921, LOC100040153
Downstream geneArmc1, Mtfr1, Pde7a, Dnajc5b, EG620290, Trim55, Crh, LOC665002, LOC100039304, LOC100040237
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302C13.bB6Ng01-302C13.g
ACCGA096284GA096285
length1,1861,098
definitionB6Ng01-302C13.b B6Ng01-302C13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgagtagtactctattgtgtaaatgtccc
acattttctgtatccattcctctgttgagagacatctgggttctttccag
cttctggctattataaataaggctgctatgaacatagtggagcatgtatc
cttcttaccagttggaacatcttctgggtatatgcccaggagaggtattg
ctggatctttcggtagtactatgtccaattttttgaggaaccaccagact
gatttccagagtggttgtataagcttgcaatcccagcagcaatggaggag
tgtttctctttctccacatcctcaccagcatctggtgtcacttgaatttt
tgatcttagccattctgactggtgtgaggtggaatctcagggttgttttg
attagcatttccatgataattaagcatgttgaatattttttcaggtgctt
ctcagccatctggtattcctcagttgagaattctttgtttagatctgtgc
cccatttttaatggggttatttgattttctggagtccagcttcttgagtt
ctttgtatatattggatattagtcccctatctgatttaggattggtaaag
ctcctttcccaatctgttggttgcctttttgtcttattgacagtgtcttt
tgccttacagagctttgcaattttatgaggtcccatttgttgattctcga
tcttaaagcacaagccattggtattctgttcaggaatttttcccctgtac
ccatatctttgaggcttttccccactttctcctctataagttttagtgtc
tctagtttatgtggagttccttgatccacttagacttgagcattgtacaa
gactcaagataagactggatcaatttgcattcttcacatgataaccgcca
gttgagccagtaccaattgtttaaaatgctgtctttttttccactgaatg
ggttttagctcctttgtcaaagatcaagtgaccataggtgtgtgggttca
ttttctgggtccttaaattctatttccaatgatctattctgttcttgtcc
acctgtaccagtaccggtgcagtttttatccacacattgttctgttagtt
aaagccttggaggtccaagcacgtgattccacccgaggccccttattgtg
aataggttgccatgcctaaggtctttgctattcccg
gaattccttaagattaacaagcctcaggacatacaaaacataacagggga
tgtggttagcatgaccctgctgtgagtcaagttatttttctgtgtcaatg
actggtaggaatattatatcaaaacatgaaatagctggcaggcatggaac
aaaatggctacagctatgctgtgggggaaggagggggtcagacctcaata
ccaagtttggttcctatgacaggcaaatcacaactgtctataactccagc
tctaagtgaactgataccctctcctgactttctcagacacctgcacccat
gtgcacatatccacacagatacacaattaaaataaaataaatatttttta
aacactaagtcaggttgccccagaatggtagtcactgatctaaaccagaa
cacactgatttaaatttatatttgtatttgtgtgtatgtaggtagtctgt
ccatgagagattaggtactcaaaaacccacagaagacagacacattgact
ttccccagaactggagttacagtaagttgtaaagcattggagacagatgc
tgggaactgatatcaagtcctctgcaaaagcatccatgctttctctcatc
cactgagccatttgtccagccacactgaattttttactcttttaaaacca
tggagttgagtaaatgcaatcatttctagaaaagatgaattaagtaagtt
aaatacctgaaattcttctttacagaatagatattaaattgatttcttct
atgttttaacttcctatatgtcatatgtcaatattagcaaaggtttacta
gcatttaccacaagctggatgttctgtttaaccactgtggtggtttgaat
atgcttggcccaacaagggacactgctgggaagtgttgccttgttggagt
aggtgtggccttgttgggtgaaatatatcactctaggagtgggcaaagct
acattccatagctgcctggagatgacagttttctcctagttcactttgga
acagatgtagatctctcagctcttctctagagtcatgcctaactggacac
tgacatgactcccctcttgatgaaatgaactgatcctcctaacctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18784521_18785621
seq2: B6Ng01-302C13.g_67_1164

seq1  GAATTCCTTAAGATTAACAAGCCTCAGGACATACAAAACATAACAGGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAGATTAACAAGCCTCAGGACATACAAAACATAACAGGGGA  50

seq1  TGTGGTTAGCATGACCCTGCTGTGAGTCAAGTTATTTTTCTGTGTCAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTAGCATGACCCTGCTGTGAGTCAAGTTATTTTTCTGTGTCAATG  100

seq1  ACTGGTAGGAATATTATATCAAAACATGAAATAGCTGGCAGGCATGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTAGGAATATTATATCAAAACATGAAATAGCTGGCAGGCATGGAAC  150

seq1  AAAATGGCTACAGCTATGCTGTGGGGGAAGGAGGGGGTCAGACCTCAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGCTACAGCTATGCTGTGGGGGAAGGAGGGGGTCAGACCTCAATA  200

seq1  CCAAGTTTGGTTCCTATGACAGGCAAATCACAACTGTCTATAACTCCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTTGGTTCCTATGACAGGCAAATCACAACTGTCTATAACTCCAGC  250

seq1  TCTAAGTGAACTGATACCCTCTCCTGACTTTCTCAGACACCTGCACCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTGAACTGATACCCTCTCCTGACTTTCTCAGACACCTGCACCCAT  300

seq1  GTGCACATATCCACACAGATACACAATTAAAATAAAATAAATATTTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACATATCCACACAGATACACAATTAAAATAAAATAAATATTTTTTA  350

seq1  AACACTAAGTCAGGTTGCCCCAGAATGGTAGTCACTGATCTAAACCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTAAGTCAGGTTGCCCCAGAATGGTAGTCACTGATCTAAACCAGAA  400

seq1  CACACTGATTTAAATTTATATTTGTATTTGTGTGTATGTAGGTAGTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGATTTAAATTTATATTTGTATTTGTGTGTATGTAGGTAGTCTGT  450

seq1  CCATGAGAGATTAGGTACTCAAAAACCCACAGAAGACAGACACATTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGAGATTAGGTACTCAAAAACCCACAGAAGACAGACACATTGACT  500

seq1  TTCCCCAGAACTGGAGTTACAGTAAGTTGTAAAGCATTGGAGACAGATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGAACTGGAGTTACAGTAAGTTGTAAAGCATTGGAGACAGATGC  550

seq1  TGGGAACTGATATCAAGTCCTCTGCAAAAGCATCCATGCTTTCTCTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACTGATATCAAGTCCTCTGCAAAAGCATCCATGCTTTCTCTCATC  600

seq1  CACTGAGCCATTTGTCCAGCCACACTGAATTTTTTACTCTTTTAAAACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGCCATTTGTCCAGCCACACTGAATTTTTTACTCTTTTAAAACCA  650

seq1  TGGAGTTGAGTAAATGCAATCATTTCTAGAAAAGATGAATTAAGTAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTGAGTAAATGCAATCATTTCTAGAAAAGATGAATTAAGTAAGTT  700

seq1  AAATACCTGAAATTCTTCTTTACAGAATAGATATTAAATTGATTTCTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTGAAATTCTTCTTTACAGAATAGATATTAAATTGATTTCTTCT  750

seq1  ATGTTTTAACTTCCTATATGTCATATGTCAATATTAGCAAAGGTTTACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTAACTTCCTATATGTCATATGTCAATATTAGCAAAGGTTTACTA  800

seq1  GCATTTACCACAAGCTGGATGTTCTGTTTAACCACTGTGGTGGTTTGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTACCACAAGCTGGATGTTCTGTTTAACCACTGTGGTGGTTTGAAT  850

seq1  ATGCTTGGCCCAACAAGGGACACTGCTGGGAAGTGTTGCCTTGTTGGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGGCCCAACAAGGGACACTGCTGGGAAGTGTTGCCTTGTTGGAGT  900

seq1  AGGTGTGGCCTTGTTGGGTGAAATATATCACTCTAGGAGTGGGCAAAGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGGCCTTGTTGGGTGAAATATATCACTCTAGGAGTGGGCAAAGCT  950

seq1  ACATTCCATAGCTGCCTGGAGATGACAGTTTTCTCCTAGTTCACTTTGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCATAGCTGCCTGGAGATGACAGTTTTCTCCTAGTTCACTTTGGA  1000

seq1  ACAAGATGTAGATCTCTCAGCTCCTTCTCTAGAGTCATGCCTAACTGGAC  1050
      || ||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AC-AGATGTAGATCTCTCAGCT-CTTCTCTAGAGTCATGCCTAACTGGAC  1048

seq1  ACTGACATGACTCCCCTCTTGATGAAAATGAACTGAATCTCTAAACCTGT  1100
      |||||||||||||||||||||||| |||||||||||  |||  |||||||
seq2  ACTGACATGACTCCCCTCTTGATG-AAATGAACTGATCCTCCTAACCTGT  1097

seq1  A  1101
      |
seq2  A  1098