BAC Information

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BAC

Clone NameB6Ng01-302G06
Chromosome3 (Build37)
Map Location 158,986,861 - 158,987,788
singlet/doubletsinglet
Overlap genenone
Upstream geneLrrc7, LOC100041008, LOC668905
Downstream geneLOC668907, Depdc1a, Rpe65, Gpr177
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302G06.bB6Ng01-302G06.g
ACCGA096451GA096452
length9281,155
definitionB6Ng01-302G06.b B6Ng01-302G06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggaactgggaaagattgtgctcatactgtggtatgatgaatt
tgtcaacaaacataagacacataaagaataacagattggaacacttttct
gctctgttactgaggttaggctgacttgattaatatttagtattatgaat
tctgaatgttttatttagctgctaatttctttctcttgtgaagtaatcat
ataaagtgtttataacaattctgagcacacacttagctctcagtatgacg
tacgtaccctctgtaagaccttaaattctactgaacctttactgtccaga
gtcctaaaaatttacctctattatttcagaagtctcaataacctcactta
agttacatacttctttgggaaagacatatttttgagtagaatttgtctag
tgtgctttcaatgaatataaaattaaaattttaaagcacgtgtttatttt
atttcagagtattttaataatttgtaatcctccttaccactaggtaatat
aatccatgtattattcaatttacaagtaatttgatactatagaattttaa
aatgtaataatgtcatttttattttctgtgaaatgataacttcttaatat
tatcaatacataggattcaaattatcataattgtaggattcttttgttgt
ctgtgcatagtagtttgtttaagtcagaatctattcaatggttatattct
gaattgactaatatatttcaaaattaatatgcatatgcctctccattttt
gatttgttctttcagatttatgttgattagtcaaaaataaaaaagtacag
aatacccaggacacaattcacagaactcaaaaaggttaacaagccgaaga
gcccaagtgggagggaaacaatcacaggagggaggggcctaggtaggaaa
ggggacagggaggggaagaggggaacat

gaattcctgatctttccaacacttttaccatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttaaatggtcaacatgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgggtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattcttttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaattttgcttcctttttttctag
ggctttttagatgtgttgtcaagctgctagtatgtgcttctctcccgttt
cttcttggaagcactcagagctattgagtttccctctttagaatgctttc
attgtgtcccaataggtttggggtacgttgtgccttcattttcatttaaa
actcttaaaaaatgcttaatttctttccttgattcccttcattgaccaag
ggattatcattgaaaaaaaatggtgttttgttttcaggtttccacacgct
gtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_158986861_158987788
seq2: B6Ng01-302G06.b_45_972 (reverse)

seq1  ATGTTCCCCTCTTCCCCTCCCTGTCCCCTTTCCTACCTAGGCCCCTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCCCTCTTCCCCTCCCTGTCCCCTTTCCTACCTAGGCCCCTCCCT  50

seq1  CCTGTGATTGTTTCCCTCCCACTTGGGCTCTTCGGCTTGTTAACCTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGATTGTTTCCCTCCCACTTGGGCTCTTCGGCTTGTTAACCTTTTT  100

seq1  GAGTTCTGTGAATTGTGTCCTGGGTATTCTGTACTTTTTTATTTTTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTGTGAATTGTGTCCTGGGTATTCTGTACTTTTTTATTTTTGACT  150

seq1  AATCAACATAAATCTGAAAGAACAAATCAAAAATGGAGAGGCATATGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACATAAATCTGAAAGAACAAATCAAAAATGGAGAGGCATATGCAT  200

seq1  ATTAATTTTGAAATATATTAGTCAATTCAGAATATAACCATTGAATAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTGAAATATATTAGTCAATTCAGAATATAACCATTGAATAGAT  250

seq1  TCTGACTTAAACAAACTACTATGCACAGACAACAAAAGAATCCTACAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTTAAACAAACTACTATGCACAGACAACAAAAGAATCCTACAATT  300

seq1  ATGATAATTTGAATCCTATGTATTGATAATATTAAGAAGTTATCATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATTTGAATCCTATGTATTGATAATATTAAGAAGTTATCATTTCA  350

seq1  CAGAAAATAAAAATGACATTATTACATTTTAAAATTCTATAGTATCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATAAAAATGACATTATTACATTTTAAAATTCTATAGTATCAAAT  400

seq1  TACTTGTAAATTGAATAATACATGGATTATATTACCTAGTGGTAAGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTAAATTGAATAATACATGGATTATATTACCTAGTGGTAAGGAGG  450

seq1  ATTACAAATTATTAAAATACTCTGAAATAAAATAAACACGTGCTTTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAATTATTAAAATACTCTGAAATAAAATAAACACGTGCTTTAAAA  500

seq1  TTTTAATTTTATATTCATTGAAAGCACACTAGACAAATTCTACTCAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTTTATATTCATTGAAAGCACACTAGACAAATTCTACTCAAAAA  550

seq1  TATGTCTTTCCCAAAGAAGTATGTAACTTAAGTGAGGTTATTGAGACTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTTCCCAAAGAAGTATGTAACTTAAGTGAGGTTATTGAGACTTC  600

seq1  TGAAATAATAGAGGTAAATTTTTAGGACTCTGGACAGTAAAGGTTCAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAATAGAGGTAAATTTTTAGGACTCTGGACAGTAAAGGTTCAGTA  650

seq1  GAATTTAAGGTCTTACAGAGGGTACGTACGTCATACTGAGAGCTAAGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAAGGTCTTACAGAGGGTACGTACGTCATACTGAGAGCTAAGTGT  700

seq1  GTGCTCAGAATTGTTATAAACACTTTATATGATTACTTCACAAGAGAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCAGAATTGTTATAAACACTTTATATGATTACTTCACAAGAGAAAG  750

seq1  AAATTAGCAGCTAAATAAAACATTCAGAATTCATAATACTAAATATTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGCAGCTAAATAAAACATTCAGAATTCATAATACTAAATATTAAT  800

seq1  CAAGTCAGCCTAACCTCAGTAACAGAGCAGAAAAGTGTTCCAATCTGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGCCTAACCTCAGTAACAGAGCAGAAAAGTGTTCCAATCTGTTA  850

seq1  TTCTTTATGTGTCTTATGTTTGTTGACAAATTCATCATACCACAGTATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATGTGTCTTATGTTTGTTGACAAATTCATCATACCACAGTATGA  900

seq1  GCACAATCTTTCCCAGTTCCTAGAATTC  928
      ||||||||||||||||||||||||||||
seq2  GCACAATCTTTCCCAGTTCCTAGAATTC  928


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