BAC Information

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BAC

Clone NameB6Ng01-302H07
Chromosome3 (Build37)
Map Location 158,986,863 - 158,987,788
singlet/doubletsinglet
Overlap genenone
Upstream geneLrrc7, LOC100041008, LOC668905
Downstream geneLOC668907, Depdc1a, Rpe65, Gpr177
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302H07.bB6Ng01-302H07.g
ACCGA096499GA096500
length9261,116
definitionB6Ng01-302H07.b B6Ng01-302H07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggaactgggaaagattgtgctcatactgtggtatgatgaatt
tgtcaacaaacataagacacataaagaataacagattggaacacttttct
gctctgttactgaggttaggctgacttgattaatatttagtattatgaat
tctgaatgttttatttagctgctaatttctttctcttgtgaagtaatcat
ataaagtgtttataacaattctgagcacacacttagctctcagtatgacg
tacgtaccctctgtaagaccttaaattctactgaacctttactgtccaga
gtcctaaaaatttacctctattatttcagaagtctcaataacctcactta
agttacatacttctttgggaaagacatatttttgagtagaatttgtctag
tgtgctttcaatgaatataaaattaaaattttaaagcacgtgtttatttt
atttcagagtattttaataatttgtaatcctccttaccactaggtaatat
aatccatgtattattcaatttacaagtaatttgatactatagaattttaa
aatgtaataatgtcatttttattttctgtgaaatgataacttcttaatat
tatcaatacataggattcaaattatcataattgtaggattcttttgttgt
ctgtgcatagtagtttgtttaagtcagaatctattcaatggttatattct
gaattgactaatatatttcaaaattaatatgcatatgcctctccattttt
gatttgttctttcagatttatgttgattagtcaaaaataaaaaagtacag
aatacccaggacacaattcacagaactcaaaaaggttaacaagccgaaga
gcccaagtgggagggaaacaatcacaggagggaggggcctaggtaggaaa
ggggacagggaggggaagaggggaac

gaattcctgatctttccaacacttttaccatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttaaatggtcaacatgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgggtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattcttttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttgcttccttttttttctag
ggcttttagatgtgttgtcaagctgctagtatgtgctctctccccgtttc
tttcttggaggcactcagagctatgagttttccgcctcttagattgcttt
ccattggtgtctcatagggtttgagatacgtttgtgcctacatgttcaat
tagacctctaaaaggtcctgatatacattccttttatcccttccttgaac
atatggttatcaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_158986863_158987788
seq2: B6Ng01-302H07.b_46_971 (reverse)

seq1  GTTCCCCTCTTCCCCTCCCTGTCCCCTTTCCTACCTAGGCCCCTCCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCTCTTCCCCTCCCTGTCCCCTTTCCTACCTAGGCCCCTCCCTCC  50

seq1  TGTGATTGTTTCCCTCCCACTTGGGCTCTTCGGCTTGTTAACCTTTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGTTTCCCTCCCACTTGGGCTCTTCGGCTTGTTAACCTTTTTGA  100

seq1  GTTCTGTGAATTGTGTCCTGGGTATTCTGTACTTTTTTATTTTTGACTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTGAATTGTGTCCTGGGTATTCTGTACTTTTTTATTTTTGACTAA  150

seq1  TCAACATAAATCTGAAAGAACAAATCAAAAATGGAGAGGCATATGCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATAAATCTGAAAGAACAAATCAAAAATGGAGAGGCATATGCATAT  200

seq1  TAATTTTGAAATATATTAGTCAATTCAGAATATAACCATTGAATAGATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTGAAATATATTAGTCAATTCAGAATATAACCATTGAATAGATTC  250

seq1  TGACTTAAACAAACTACTATGCACAGACAACAAAAGAATCCTACAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAAACAAACTACTATGCACAGACAACAAAAGAATCCTACAATTAT  300

seq1  GATAATTTGAATCCTATGTATTGATAATATTAAGAAGTTATCATTTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTTGAATCCTATGTATTGATAATATTAAGAAGTTATCATTTCACA  350

seq1  GAAAATAAAAATGACATTATTACATTTTAAAATTCTATAGTATCAAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAAAATGACATTATTACATTTTAAAATTCTATAGTATCAAATTA  400

seq1  CTTGTAAATTGAATAATACATGGATTATATTACCTAGTGGTAAGGAGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAAATTGAATAATACATGGATTATATTACCTAGTGGTAAGGAGGAT  450

seq1  TACAAATTATTAAAATACTCTGAAATAAAATAAACACGTGCTTTAAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTATTAAAATACTCTGAAATAAAATAAACACGTGCTTTAAAATT  500

seq1  TTAATTTTATATTCATTGAAAGCACACTAGACAAATTCTACTCAAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTATATTCATTGAAAGCACACTAGACAAATTCTACTCAAAAATA  550

seq1  TGTCTTTCCCAAAGAAGTATGTAACTTAAGTGAGGTTATTGAGACTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCCCAAAGAAGTATGTAACTTAAGTGAGGTTATTGAGACTTCTG  600

seq1  AAATAATAGAGGTAAATTTTTAGGACTCTGGACAGTAAAGGTTCAGTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAGAGGTAAATTTTTAGGACTCTGGACAGTAAAGGTTCAGTAGA  650

seq1  ATTTAAGGTCTTACAGAGGGTACGTACGTCATACTGAGAGCTAAGTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGGTCTTACAGAGGGTACGTACGTCATACTGAGAGCTAAGTGTGT  700

seq1  GCTCAGAATTGTTATAAACACTTTATATGATTACTTCACAAGAGAAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAATTGTTATAAACACTTTATATGATTACTTCACAAGAGAAAGAA  750

seq1  ATTAGCAGCTAAATAAAACATTCAGAATTCATAATACTAAATATTAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAGCTAAATAAAACATTCAGAATTCATAATACTAAATATTAATCA  800

seq1  AGTCAGCCTAACCTCAGTAACAGAGCAGAAAAGTGTTCCAATCTGTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCCTAACCTCAGTAACAGAGCAGAAAAGTGTTCCAATCTGTTATT  850

seq1  CTTTATGTGTCTTATGTTTGTTGACAAATTCATCATACCACAGTATGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTGTCTTATGTTTGTTGACAAATTCATCATACCACAGTATGAGC  900

seq1  ACAATCTTTCCCAGTTCCTAGAATTC  926
      ||||||||||||||||||||||||||
seq2  ACAATCTTTCCCAGTTCCTAGAATTC  926


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