BAC Information

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BAC

Clone NameB6Ng01-302J02
Chromosome3 (Build37)
Map Location 66,658,949 - 66,659,746
singlet/doubletsinglet
Overlap genenone
Upstream geneCcnl1, LOC625048, Veph1, Tpi-rs2, Ptx3
Downstream geneLOC625115, Shox2, Rsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302J02.bB6Ng01-302J02.g
ACCGA096583GA096584
length1,0161,150
definitionB6Ng01-302J02.b B6Ng01-302J02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggttattttttccagatgcacagctctttagaaaaaaaaatc
tgcaaatctcctcactgaaccatctggatggctagcaggaaggggggctg
tctccgtaccaattctctctagaacctattttgtgcttactcacatcaat
tgaatgttcttccctataagggaacatttaattgaaatattacaagctcc
catgtgatcacttcatcctcaagtttgtttccagggaaaatgctttctgt
acagttgaatgtcataggctgcttatccaaaaaataaaaacatagtatgt
gtagtggctattcctggttgtcaacttgacaatatttggaatgaactaca
attcggaattggaaggctcaccagtgacccttatctggaggcttggagat
ccttatctggatcttggtttgaagatcttgagccatagtggctatggatt
ccagaagattgaatctccgagttaaggaacacacctttaatctgggctat
gcctttcatctgggattaaaggtgtggtggaacacacctttaatctgggc
tacaccttttgctggagacaatataaggacattggaagaagggagtctag
ctcttgctcttgctcttgctcctttgcctgcttgctgcgtgagactgagt
aactgctagatccttggacttccattcacagctgcgactgaacaattgtt
gggaattcggctgccgactgtaagtcatcaataaattcctttactattta
gagattatccataagttctgtgactctagagaaccctgactaatacagaa
gttggtaccaggagtggttctagagtaacagaagtacaaggatgaatctt
tttaaatatactggaattggctttgttgatccaccagcactttcaaatat
ttgaaacctctccagatttcttctccctcctgggagcttcagagaatttt
gaagactccatggtttgaaactatattccgaaacttaaagaagcctaatg
ccctttgattttctaa
gaattccatgaaaacaaaatcaaacaggtgaaggacatgaacaaaaccat
ccaggatctaaaaatggaaatagaaacaataaagaaatcacaaaggaaga
caactctggagttagaaaacctaggaaagagatcaggagtcatagatgca
agcatcaccaacagaataggagctagacgagagaatatcaggtgcagaag
ataaccatagaaaacactgacacaacagtcaaagaaaatggaaaaaaaca
aaaagctcttaacccaaaacatccaagaaatccaggacacaatgagaagg
ccaaacctaaggataataggtatagaagagagcaaatattctgatctgaa
agggccagtaaatatcttcaacaaaattatagaaacttccctcgagtaaa
gaaagaaatgccaatgaacatacaagaagcctacagaactccacatacat
tggaccagaaaagaaattcctcccgtcatataataatcaaaacaccaaac
aaagaaaaaaatattaaaagcagtaagggaaaaaggtcaagtaacatata
aaggcagacctatcagaattacaccagacttctcaccagagactatgaaa
gccagcagatcctgggcaaatctcatacaggctctaagagaacataaatg
ccagcccagactactatacccagatggagaaaccaagatattccatgaca
aaaccaaatttacacagtatctttccataaatccagccctacaaagaata
atagatggaaaatgccaacacaaagaaggagaaagtacaccctagaaaaa
gcaagaaagtaatcttctttcaacaagcccaaaagaaaatagccacacaa
acataagaacacctaacaacaaaaataacaggaagtaacaattacttttc
ccttaatagatcttaacatcaatgggactcaattccccaataaaaagaac
atagactaacagactggatatgtaaacaggacccagcattttgctacata
caggaaacaccacctcagtgaacaagacagaacactacctcagagttaaa
aggtgaaaaaccattttctagcaatggtccagaaacaggcttgattagcc
attctatatcagtaatcactccaccgaaggctatcaaaaggattaggcag

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_66658949_66659746
seq2: B6Ng01-302J02.b_46_843

seq1  GAATTCCTGGTTATTTTTTCCAGATGCACAGCTCTTTAGAAAAAAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGTTATTTTTTCCAGATGCACAGCTCTTTAGAAAAAAAAATC  50

seq1  TGCAAATCTCCTCACTGAACCATCTGGATGGCTAGCAGGAAGGGGGGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATCTCCTCACTGAACCATCTGGATGGCTAGCAGGAAGGGGGGCTG  100

seq1  TCTCCGTACCAATTCTCTCTAGAACCTATTTTGTGCTTACTCACATCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGTACCAATTCTCTCTAGAACCTATTTTGTGCTTACTCACATCAAT  150

seq1  TGAATGTTCTTCCCTATAAGGGAACATTTAATTGAAATATTACAAGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTCTTCCCTATAAGGGAACATTTAATTGAAATATTACAAGCTCC  200

seq1  CATGTGATCACTTCATCCTCAAGTTTGTTTCCAGGGAAAATGCTTTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGATCACTTCATCCTCAAGTTTGTTTCCAGGGAAAATGCTTTCTGT  250

seq1  ACAGTTGAATGTCATAGGCTGCTTATCCAAAAAATAAAAACATAGTATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGAATGTCATAGGCTGCTTATCCAAAAAATAAAAACATAGTATGT  300

seq1  GTAGTGGCTATTCCTGGTTGTCAACTTGACAATATTTGGAATGAACTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGGCTATTCCTGGTTGTCAACTTGACAATATTTGGAATGAACTACA  350

seq1  ATTCGGAATTGGAAGGCTCACCAGTGACCCTTATCTGGAGGCTTGGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGAATTGGAAGGCTCACCAGTGACCCTTATCTGGAGGCTTGGAGAT  400

seq1  CCTTATCTGGATCTTGGTTTGAAGATCTTGAGCCATAGTGGCTATGGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATCTGGATCTTGGTTTGAAGATCTTGAGCCATAGTGGCTATGGATT  450

seq1  CCAGAAGATTGAATCTCCGAGTTAAGGAACACACCTTTAATCTGGGCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGATTGAATCTCCGAGTTAAGGAACACACCTTTAATCTGGGCTAT  500

seq1  GCCTTTCATCTGGGATTAAAGGTGTGGTGGAACACACCTTTAATCTGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCATCTGGGATTAAAGGTGTGGTGGAACACACCTTTAATCTGGGC  550

seq1  TACACCTTTTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTTTTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAG  600

seq1  CTCTTGCTCTTGCTCTTGCTCCTTTGCCTGCTTGCTGCGTGAGACTGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCTCTTGCTCTTGCTCCTTTGCCTGCTTGCTGCGTGAGACTGAGT  650

seq1  AACTGCTAGATCCTTGGACTTCCATTCACAGCTGCGACTGAACAATTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTAGATCCTTGGACTTCCATTCACAGCTGCGACTGAACAATTGTT  700

seq1  GGGAATTCGGCTGCCGACTGTAAGTCATCAATAAATTCCTTTACTATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTCGGCTGCCGACTGTAAGTCATCAATAAATTCCTTTACTATTTA  750

seq1  GAGATTATCCATAAGTTCTGTGACTCTAGAGAACCCTGACTAATACAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTATCCATAAGTTCTGTGACTCTAGAGAACCCTGACTAATACAG  798