MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-302N20
Chromosome	3 (Build37)
Map Location	83,271,507 - 83,413,246
singlet/doublet	doublet
Overlap gene	1700028M03Rik, LOC100042007
Upstream gene	Npy2r, LOC100041940, EG633285, Lrat, Fgg, Fga, Fgb, Plrg1, EG627094, Dchs2
Downstream gene	LOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik, Arfip1, EG667788, EG627369, Tigd4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Npy2r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18167 MGI:108418
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041940 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041940
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG633285 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:633285 MGI:3645057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 23 Proteins

name	Lrat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:79235 MGI:1891259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fgg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99571 MGI:95526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fga (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14161 MGI:1316726
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fgb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110135 MGI:99501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plrg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53317 MGI:1858197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627094 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627094 MGI:3645328
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 1 Protein

name	Dchs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229459 MGI:2685263
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins

name	1700028M03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69460 MGI:1916710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100042007 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100042091 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042091
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Sfrp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20319 MGI:108078
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC633522 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633522
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Tlr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24088 MGI:1346060
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D930015E06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229473 MGI:2443399
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mnd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76915 MGI:1924165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trim2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80890 MGI:1933163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624713 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624713 MGI:3648757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 180 ESTs, 6 Proteins

name	6330505N24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229474 MGI:2684972
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arfip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99889 MGI:1277120
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667788 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667788 MGI:3645282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG627369 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627369 MGI:3645270
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Tigd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:403175 MGI:2685264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npy2r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375582 GeneID:18167 MGI:108418
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuropeptide Y receptor Y2 transcript_id : NM_008731.2

name	EG633285 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251237 GeneID:633285 MGI:3645057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 23 Proteins product : predicted gene, EG633285 transcript_id : XM_001477059.1

name	Lrat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386407 GeneID:79235 MGI:1891259
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase) transcript_id : NM_023624.3

name	Fgg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527077 GeneID:99571 MGI:95526
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibrinogen, gamma polypeptide transcript_id : NM_133862.1

name	Fga (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87239968 GeneID:14161 MGI:1316726
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibrinogen, alpha polypeptide transcript_id : NM_010196.2

name	Fgb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130602 GeneID:110135 MGI:99501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibrinogen, B beta polypeptide transcript_id : NM_181849.2

name	Plrg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801146 GeneID:53317 MGI:1858197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleiotropic regulator 1, PRL1 homolog (Arabidopsis) transcript_id : NM_016784.3

name	EG627094 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251234 GeneID:627094 MGI:3645328
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 1 Protein product : predicted gene, EG627094 transcript_id : XM_891750.3

name	Dchs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369681 GeneID:229459 MGI:2685263
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : dachsous 2 (Drosophila) transcript_id : XM_143371.6

name	1700028M03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251239 GeneID:69460 MGI:1916710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 1700028M03 gene transcript_id : XM_899790.3

name	LOC100042007 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251235 GeneID:100042007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to tau tubulin kinase 1 transcript_id : XM_001477370.1

name	Sfrp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677894 GeneID:20319 MGI:108078
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secreted frizzled-related protein 2 transcript_id : NM_009144.1

name	Tlr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981332 GeneID:24088 MGI:1346060
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : toll-like receptor 2 transcript_id : NM_011905.2

name	D930015E06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381457 GeneID:229473 MGI:2443399
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D930015E06 gene transcript_id : NM_172681.4

name	Mnd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354297 GeneID:76915 MGI:1924165
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : meiotic nuclear divisions 1 homolog (S. cerevisiae) transcript_id : NM_029797.2

name	Trim2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14010848 GeneID:80890 MGI:1933163
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif protein 2 transcript_id : NM_030706.1

name	EG624713 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369598 GeneID:624713 MGI:3648757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 180 ESTs, 6 Proteins product : predicted gene, EG624713 transcript_id : XM_890670.2

name	6330505N24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801767 GeneID:229474 MGI:2684972
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330505N24 gene transcript_id : NM_001033301.2

name	Arfip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487361 GeneID:99889 MGI:1277120
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor interacting protein 1 transcript_id : NM_001081093.1

name	EG627369 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369686 GeneID:627369 MGI:3645270
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : predicted gene, EG627369 transcript_id : XM_899893.2

name	Tigd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113866000 GeneID:403175 MGI:2685264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tigger transposable element derived 4 transcript_id : NM_207278.2

name	Npy2r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679122 GeneID:18167 MGI:108418
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004983 - neuropeptide Y receptor activity [Evidence IDA]; GO:0001601 - peptide YY receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : NPY-Y2 receptor product : neuropeptide Y receptor Y2 protein_id : NP_032757.1

name	EG633285 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251238 GeneID:633285 MGI:3645057
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477109.1

name	Lrat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963753 CCDS:CCDS17430.1 GeneID:79235 MGI:1891259
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0008374 - O-acyltransferase activity [Evidence IDA]; GO:0047173 - phosphatidylcholine-retinol O-acyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006653 - lecithin metabolism [Evidence TAS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA]; GO:0006776 - vitamin A metabolism [Evidence IDA] codon_start : 1 product : lecithin-retinol acyltransferase protein_id : NP_076113.1

name	Fgg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527078 GeneID:99571 MGI:95526
definition	GO_component : GO:0005577 - fibrinogen complex [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0030168 - platelet activation [Evidence IEA]; GO:0051258 - protein polymerization [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : gamma-fibrinogen; fibrinogen gamma-chain product : fibrinogen, gamma polypeptide protein_id : NP_598623.1

name	Fga (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563252 CCDS:CCDS17431.1 GeneID:14161 MGI:1316726
definition	codon_start : 1 note : fibrinogen, A alpha polypeptide product : fibrinogen, alpha polypeptide protein_id : NP_034326.1

name	Fgb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859809 CCDS:CCDS17432.1 GeneID:110135 MGI:99501
definition	codon_start : 1 product : fibrinogen, B beta polypeptide protein_id : NP_862897.1

name	Plrg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980791 CCDS:CCDS17433.1 GeneID:53317 MGI:1858197
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : pleiotropic regulator 1 protein_id : NP_058064.2

name	EG627094 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369680 GeneID:627094 MGI:3645328
definition	codon_start : 1 product : hypothetical protein protein_id : XP_896843.2

name	Dchs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369682 GeneID:229459 MGI:2685263
definition	codon_start : 1 note : overriding stop codons product : similar to cadherin protein protein_id : XP_143371.6 transl_except : (pos:83058311..83058313,aa:OTHER)

name	1700028M03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82890236 GeneID:69460 MGI:1916710
definition	codon_start : 1 product : hypothetical protein LOC69460 protein_id : XP_904883.1

name	LOC100042007 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251236 GeneID:100042007
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477420.1

name	Sfrp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677895 CCDS:CCDS17434.1 GeneID:20319 MGI:108078
definition	GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IGI]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0001756 - somitogenesis [Evidence IGI]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : stromal cell derived factor 5; secreted frizzled-related sequence protein 5 product : secreted frizzled-related sequence protein 2 protein_id : NP_033170.1

name	Tlr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981333 CCDS:CCDS17435.1 GeneID:24088 MGI:1346060
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IMP]; GO:0042892 - chloramphenicol transport [Evidence IMP]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0042535 - positive regulation of tumor necrosis factor-alpha biosynthesis [Evidence IMP]; GO:0008063 - Toll signaling pathway [Evidence IDA] codon_start : 1 exception : mismatches in translation product : toll-like receptor 2 protein_id : NP_036035.2

name	D930015E06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205395 GeneID:229473 MGI:2443399
definition	codon_start : 1 product : hypothetical protein LOC229473 protein_id : NP_766269.3

name	Mnd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37591185 GeneID:76915 MGI:1924165
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 exception : mismatches in translation product : GAJ protein protein_id : NP_084073.1

name	Trim2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14010849 CCDS:CCDS17437.1 GeneID:80890 MGI:1933163
definition	GO_component : GO:0005737 - cytoplasm [Evidence NAS] [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0017022 - myosin binding [Evidence NAS]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] [Evidence NAS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : neural activity-related ring finger protein product : tripartite motif protein TRIM2 protein_id : NP_109631.1

name	EG624713 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82890043 GeneID:624713 MGI:3648757
definition	codon_start : 1 product : similar to ribosomal protein L36a protein_id : XP_895763.1

name	6330505N24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677486 CCDS:CCDS17438.1 GeneID:229474 MGI:2684972
definition	GO_function : GO:0003779 - actin binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0016043 - cell organization and biogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC229474 protein_id : NP_001028473.1

name	Arfip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487362 GeneID:99889 MGI:1277120
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0000139 - Golgi membrane [Evidence ISS] GO_function : GO:0042802 - identical protein binding [Evidence IPI] GO_process : GO:0006886 - intracellular protein transport [Evidence ISS]; GO:0050708 - regulation of protein secretion [Evidence ISS] codon_start : 1 product : ADP-ribosylation factor interacting protein 1 protein_id : NP_001074562.1

name	EG627369 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82890248 GeneID:627369 MGI:3645270
definition	codon_start : 1 product : hypothetical protein protein_id : XP_904986.1

name	Tigd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402305 CCDS:CCDS17439.1 GeneID:403175 MGI:2685264
definition	GO_component : GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0030001 - metal ion transport [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 product : tigger transposable element derived 4 protein_id : NP_997161.1

name	LOC100041940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041940
definition	number : 2 pseudo : _no_value

name	LOC100041940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041940
definition	number : 1 pseudo : _no_value

name	LOC100042091 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042091
definition	number : 1 pseudo : _no_value

name	LOC100042091 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042091
definition	number : 2 pseudo : _no_value

name	LOC100042091 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042091
definition	number : 3 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 1 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 2 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 3 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 4 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 5 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 6 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 7 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 8 pseudo : _no_value

name	EG667788 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667788
definition	number : 1 pseudo : _no_value

clone name	MSMg01-073P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067C23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-444E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461B10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-291A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460N17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-486K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349D22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-302N20.b	B6Ng01-302N20.g
ACC	GA096807	GA096808
length	1,148	908
definition	B6Ng01-302N20.b	B6Ng01-302N20.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(83,271,507 - 83,272,657)	(83,412,346 - 83,413,246)
sequence	gaattctttcagaccttcaaagaagacctaataccaatactgttcaaact attcccaaaatagaaacagaaggaacactacacaattcgttctatggagc cacaattacactgatacctaaacatcacaaagacacaataaagaaagaga acttcagaccaatcttccttatgaatattaatgcaaaaatactcaataaa attcctttaaaaaatatccaaaccttcttttttagcatatatgatgctag aaaactatagattgtcccacacaagcacttgtacttaagatttatacaat tttacaattctgttcccttgaatcagagagtttaataaagagaataaaga gatcattttgatgaaaaccaaactcatcacaggaattcactttattattc cctttttaataccatacataccattttaaaaattgtctaacaatatagga aaactcttataatatgacaaacatgataggtatatatgtatatatgtgca caagcacatgtatgctcattagcttattagaaacagaaccttgcctaaat taaaaattaaatgaatgctcttaattttgttttcattatgaccaattttg ttttatgctttttcttcacaattctctgtagttttcataagtactaaaat agatctcttttgtcccccaaatatatgtttagggtaggaggccatggcag acaaggagcaaggggaatgtggcggtgtggagagggcaggataacctggg agcagatgaactctccccagctgttggtagcaggctgtgtcctgctctca gttactccatgttgtggaaagcagtgttttatttactttttttcctagac tgtatgctgaccaagcagaacctttttttataaaggtctttgcactccat ttttgaggatggaggtaactccataccttgctgtgcacataatcagcaac aactctccagcatcatgcatgagcaacagactgatagtagctcattcccc aaagcaaggtgacacctatccatttatcaagcaaattaggaccacatgac acattaaaatcatattcagaatgcagcacatagcagacttgaggaaccat ccttagcgaatcctaaaaggaaggtgccatacctaaagctgcatgatg	gaattccctgaaaggaagactgggaactacactctgagtgtagccagtga gctcacttttcaagattctctgaggactagtctgtacagtgaagttaggt taagaggaggaaggattgacagctgtctggctacaggcctgataataact gagtaaaacagcagcagcagcagcaacaacaaacaacaacaataacaaca acaaaaaccaaccaaccaaaccaaaaaaaatgtaggctttcagagcaaat attaatgataaaattaatcactattgagaatgtgacaaatttgttagtga atatttttatttctctgcttgcccagggctcaaaatccacttgctcaaaa atttctagctcatatcctcactgtgttatgataacagtattaattaaaca ctggtatataatatatgttaattttttatcaccaggagcaagcctaggag cttgaaatgcagtgatgtgcattggtgtttggtgatatcatttactttgc aagagaggagtctggagggatgatcagtgaagtagctttcctgcaattac acagccaacgaggatgtgacatctacaagcatatagcacggcttcagttc ttagagccatgcaaagcttacactggcatcatgaacatgaggctgggatg ggattctttgatgacttcctatctgtccttttgttgagtgagtcttgtgc tgtcatcatcaccgtgagtgatattttggggtgctgagtatgtatggtag gatttatgctgggaaaaaatatggtgaatataacactcatgcctcagaaa aggagaacaccctggtactcccttatgagaaatgtagatgggaggtaaag gcttaggattgtccttcaatagctcaaggaaaggtcaacattgagaccag agctgtat
quality values	Open. Hide. 49 26 30 35 58 58 58 58 62 34 26 62 49 54 62 62 62 38 39 62 62 62 54 62 62 47 33 62 62 62 62 62 24 24 36 17 21 25 24 28 28 49 28 28 22 28 34 56 62 62 62 62 49 54 62 59 59 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 56 59 54 43 43 32 48 56 56 54 49 49 49 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 54 58 58 58 58 58 58 54 52 58 58 58 58 58 58 58 58 54 49 58 58 58 58 49 58 54 58 58 54 58 58 58 58 58 54 54 58 58 58 58 58 58 58 52 58 58 48 58 58 58 58 58 54 54 58 58 58 58 52 58 58 58 52 50 58 58 58 42 58 58 39 41 42 58 49 58 58 58 58 50 58 58 49 52 54 58 50 58 58 58 58 58 52 58 58 58 52 52 53 58 53 58 58 58 53 58 58 53 58 45 53 58 58 58 53 42 53 49 58 50 52 50 49 51 52 58 58 54 51 51 53 53 48 49 58 51 54 58 58 50 49 40 50 43 38 41 38 40 51 58 51 58 49 58 51 58 50 58 49 53 31 49 49 31 54 33 51 58 30 51 39 39 37 53 54 49 49 53 42 53 32 37 49 27 54 54 32 52 44 37 25 54 54 51 39 40 32 54 39 54 47 39 54 49 35 54 49 41 40 51 32 46 35 54 52 31 52 40 46 31 30 32 40 40 49 53 37 54 44 32 25 45 37 30 35 23 35 54 31 35 53 45 39 20 39 33 21 31 32 42 51 52 34 45 41 47 31 42 30 32 52 34 53 32 40 52 28 52 32 32 34 32 53 30 47 31 53 30 32 32 52 33 28 32 42 32 29 26 31 43 31 24 22 27 41 24 40 47 27 30 31 45 39 31 51 32 51 51 32 31 26 51 51 30 31 24 51 51 51 51 51 31 31 31 30 31 30 37 29 31 46 15 26 27 31 38 37 31 31 20 26 21 46 24 31 30 13 46 32 18 19 31 48 47 48 48 46 32 20 18 6 46 6 10 8 16 27 26 46 23 18 30 27 27 32 21 25 19 18 46 48 46 26 30 32 28 16 36 31 27 39 27 24 32 9 26 38 38 38 30 33 27 31 26 24 27 20 38 31 31 36 32 30 31 35 31 23 17 10 14 14 21 31 19 24 31 17 25 14 18 23 21 30 29 35 11 11 23 31 16 14 28 33 26 17 27 34 26 21 11 19 7 30 15 5 6 13 23 31 21 31 33 26 22 20 20 17 34 24 34 34 25 21 25 17 23 37 31 15 7 33 24 14 12 29 4 5 16 11 17 10 16 15 16 27 23 23 27 11 14 15 30 38 24 7 13 12 23 27 19 18 13 40 8 24 21 12 22 8 28 26 27 7 14 6 12 6 17 11 25 8 13 21 15 10 33 29 17 28 27 8 12 5 4 11 6 21 20 17 8 12 12 23 13 8 3 5 6 4 10 5 15 11 9 7 19 7 7 8 15 7 5 15 12 13 7 4 10 7 19 6 6 8 8 8 5 7 8 17 4 20 15 3 6 28 28 22 8 15 5 7 5 16 6 8 5 6 4 10 4 8 15 3 8 19 6 3 2 3 6 5 13 6 7 6 4 3	Open. Hide. 58 31 32 36 58 58 62 62 62 49 31 8 10 10 15 8 11 7 10 9 12 24 28 27 33 38 42 62 62 62 62 54 62 62 62 49 41 32 49 62 62 62 62 62 43 47 62 54 47 47 62 62 62 49 49 37 38 38 32 32 24 24 24 35 59 44 45 32 32 36 59 62 59 59 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 49 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 49 62 62 62 59 59 62 62 59 62 62 62 62 59 59 49 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 35 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 43 43 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 62 62 62 52 62 62 62 62 62 62 42 62 62 47 42 62 54 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 52 62 52 62 58 45 42 58 58 58 58 52 58 54 39 58 54 58 54 54 52 58 54 54 54 58 40 54 54 58 52 54 54 58 58 54 54 58 54 54 58 54 58 54 52 52 54 58 58 54 58 54 54 42 58 52 39 39 42 58 58 54 39 58 58 54 54 58 54 54 52 52 44 48 54 45 54 52 54 52 50 54 58 49 58 42 52 49 58 51 27 46 37 52 51 49 49 29 25 58 58 49 41 27 50 51 58 58 47 48 41 31 46 53 34 58 50 50 58 41 51 52 50 51 51 34 50 53 32 58 58 50 51 24 48 42 51 35 53 50 51 32 52 37 58 47 58 40 49 50 53 54 49 46 40 53 43 40 53 52 46 40 58 58 39 49 39 29 52 41 29 20 40 50 58 58 51 58 58 58 44 40 50 26 53 50 46 16 36 35 32 51 41 39 41 49 58 23 39 15 33 36 18 58 51 22 24 42 42 39 45 51 39 21 51 52 49 37 38 25 18 39 53 54 40 37 41 31 29 30 25 11 16 14 17 18 30 38 18 40 45 49 27 15 21 21 15 22 31 29 23 21 40 40 16 31 47 33 23 6 23 10 27 33 29 38 9 9 44 26 36 10 14 21 17 14 32 35 15 40 30 30 28 22 14 32 17 9 6 18 26 17 29 15 27 32 52 21 10 9 16 13 12 11 14 5 6 31 9 8 11 41 31 28 31 31 12 7 12 11 30 11 9 11 28 28 23 10 27 31 22 13 27 16 21 7 10 8 6 8 8 11 15 8 6 10 10 6 13 16 6 8 26 30 21 17 21 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_83271507_83272657
seq2: B6Ng01-302N20.b_47_1194

seq1  GAATTCTTTCAGACCTTCAAAGAAGACCTAATACCAATACTGTTCAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGACCTTCAAAGAAGACCTAATACCAATACTGTTCAAACT  50

seq1  ATTCCCAAAATAGAAACAGAAGGAACACTACACAATTCGTTCTATGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAAAATAGAAACAGAAGGAACACTACACAATTCGTTCTATGGAGC  100

seq1  CACAATTACACTGATACCTAAACATCACAAAGACACAATAAAGAAAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTACACTGATACCTAAACATCACAAAGACACAATAAAGAAAGAGA  150

seq1  ACTTCAGACCAATCTTCCTTATGAATATTAATGCAAAAATACTCAATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGACCAATCTTCCTTATGAATATTAATGCAAAAATACTCAATAAA  200

seq1  ATTCCTTTAAAAAATATCCAAACCTTCTTTTTTAGCATATATGATGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTAAAAAATATCCAAACCTTCTTTTTTAGCATATATGATGCTAG  250

seq1  AAAACTATAGATTGTCCCACACAAGCACTTGTACTTAAGATTTATACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATAGATTGTCCCACACAAGCACTTGTACTTAAGATTTATACAAT  300

seq1  TTTACAATTCTGTTCCCTTGAATCAGAGAGTTTAATAAAGAGAATAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATTCTGTTCCCTTGAATCAGAGAGTTTAATAAAGAGAATAAAGA  350

seq1  GATCATTTTGATGAAAACCAAACTCATCACAGGAATTCACTTTATTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTTTGATGAAAACCAAACTCATCACAGGAATTCACTTTATTATTC  400

seq1  CCTTTTTAATACCATACATACCATTTTAAAAATTGTCTAACAATATAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTAATACCATACATACCATTTTAAAAATTGTCTAACAATATAGGA  450

seq1  AAACTCTTATAATATGACAAACATGATAGGTATATATGTATATATGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTTATAATATGACAAACATGATAGGTATATATGTATATATGTGCA  500

seq1  CAAGCACATGTATGCTCATTAGCTTATTAGAAACAGAACCTTGCCTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACATGTATGCTCATTAGCTTATTAGAAACAGAACCTTGCCTAAAT  550

seq1  TAAAAATTAAATGAATGCTCTTAATTTTGTTTTCATTATGACCAATTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTAAATGAATGCTCTTAATTTTGTTTTCATTATGACCAATTTTG  600

seq1  TTTTATGCTTTTTCTTCACAATTCTCTGTAGTTTTCATAAGTACTAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGCTTTTTCTTCACAATTCTCTGTAGTTTTCATAAGTACTAAAAT  650

seq1  AGATCTCTTTTGTCCCCCAAATATATGTTTAGGGTAGGAGGCCATGGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCTTTTGTCCCCCAAATATATGTTTAGGGTAGGAGGCCATGGCAG  700

seq1  ACAAGGAGCAAGGGGAATGTGGCGGTGTGGAGAGGGCAGGATAACCTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGCAAGGGGAATGTGGCGGTGTGGAGAGGGCAGGATAACCTGGG  750

seq1  AGCAGATGAACTCTCCCCAGCTGTTGGTAGCAGGCTGTGTCCTGCTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATGAACTCTCCCCAGCTGTTGGTAGCAGGCTGTGTCCTGCTCTCA  800

seq1  GTTACTCCATGTTGTGGAAAGCAGTGTTTTATTTAC-TTTTTTCCTAGAC  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTTACTCCATGTTGTGGAAAGCAGTGTTTTATTTACTTTTTTTCCTAGAC  850

seq1  TGTATGCTGACCAAGCAGAACCTTTTTTTATAAGGGTCTTTGCACTCCA-  898
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  TGTATGCTGACCAAGCAGAACCTTTTTTTATAAAGGTCTTTGCACTCCAT  900

seq1  TTTTGAGGATGGAGGGTAACTCCATACCTTGCTGTGCACATAATCAGCAA  948
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGGATGGA-GGTAACTCCATACCTTGCTGTGCACATAATCAGCAA  949

seq1  CAACTCTCCAGCATCATGCATGAGC-ACAGACTGATAGTAGCTCATTCCC  997
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAACTCTCCAGCATCATGCATGAGCAACAGACTGATAGTAGCTCATTCCC  999

seq1  CAAAGCAAAGGGTGACACCTATCCATTTATCAAAGCAAATTAGGACCACA  1047
      ||||||||  ||||||||||||||||||||| ||||||||||||||||||
seq2  CAAAGCAA--GGTGACACCTATCCATTTATC-AAGCAAATTAGGACCACA  1046

seq1  TGAACAACATTAAAATCATATCAAGAATGCCAGGCACATAGCAGAC-TGA  1096
      |||   |||||||||||||||  |||||||   ||||||||||||| |||
seq2  TGA--CACATTAAAATCATATTCAGAATGC--AGCACATAGCAGACTTGA  1092

seq1  GGAA-CAACCTTAGGCGAACCCTAAAAGG-AGGTG-CATACCAAAAGCTG  1143
      |||| || ||||| ||||| ||||||||| ||||| |||||| |||||||
seq2  GGAACCATCCTTA-GCGAATCCTAAAAGGAAGGTGCCATACCTAAAGCTG  1141

seq1  CAATGATG  1151
      | ||||||
seq2  C-ATGATG  1148

seq1: chr3_83412346_83413246
seq2: B6Ng01-302N20.g_66_973 (reverse)

seq1  ATACAGCACT-GTCTCA--TCTGACCCTTCCTTGTGCT-CTGAAGGAC-A  45
      ||||||| || ||||||    ||||| ||||||| |||  |||||||| |
seq2  ATACAGCTCTGGTCTCAATGTTGACCTTTCCTTGAGCTATTGAAGGACAA  50

seq1  TCCTAAGCTTTTTACCT-CCATCTACATTTCTCAT-AGGGAGTACCA-GG  92
      ||||||||  ||||||| ||||||||||||||||| ||||||||||| ||
seq2  TCCTAAGC-CTTTACCTCCCATCTACATTTCTCATAAGGGAGTACCAGGG  99

seq1  TGTTCTCCTTTTCTGAGGCATGAGTGTTATATTCACCATATTTTTTCCCA  142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCCTTTTCTGAGGCATGAGTGTTATATTCACCATATTTTTTCCCA  149

seq1  GCATAAATCCTACCATACATACTCAGCACCCCAAAATATCACTCACGGTG  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAATCCTACCATACATACTCAGCACCCCAAAATATCACTCACGGTG  199

seq1  ATGATGACAGCACAAGACTCACTCAACAAAAGGACAGATAGGAAGTCATC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGACAGCACAAGACTCACTCAACAAAAGGACAGATAGGAAGTCATC  249

seq1  AAAGAATCCCATCCCAGCCTCATGTTCATGATGCCAGTGTAAGCTTTGCA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATCCCATCCCAGCCTCATGTTCATGATGCCAGTGTAAGCTTTGCA  299

seq1  TGGCTCTAAGAACTGAAGCCGTGCTATATGCTTGTAGATGTCACATCCTC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTAAGAACTGAAGCCGTGCTATATGCTTGTAGATGTCACATCCTC  349

seq1  GTTGGCTGTGTAATTGCAGGAAAGCTACTTCACTGATCATCCCTCCAGAC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTGTGTAATTGCAGGAAAGCTACTTCACTGATCATCCCTCCAGAC  399

seq1  TCCTCTCTTGCAAAGTAAATGATATCACCAAACACCAATGCACATCACTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTTGCAAAGTAAATGATATCACCAAACACCAATGCACATCACTG  449

seq1  CATTTCAAGCTCCTAGGCTTGCTCCTGGTGATAAAAAATTAACATATATT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAAGCTCCTAGGCTTGCTCCTGGTGATAAAAAATTAACATATATT  499

seq1  ATATACCAGTGTTTAATTAATACTGTTATCATAACACAGTGAGGATATGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACCAGTGTTTAATTAATACTGTTATCATAACACAGTGAGGATATGA  549

seq1  GCTAGAAATTTTTGAGCAAGTGGATTTTGAGCCCTGGGCAAGCAGAGAAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAATTTTTGAGCAAGTGGATTTTGAGCCCTGGGCAAGCAGAGAAA  599

seq1  TAAAAATATTCACTAACAAATTTGTCACATTCTCAATAGTGATTAATTTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATATTCACTAACAAATTTGTCACATTCTCAATAGTGATTAATTTT  649

seq1  ATCATTAATATTTGCTCTGAAAGCCTACATTTTTTTTGGTTTGGTTGGTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTAATATTTGCTCTGAAAGCCTACATTTTTTTTGGTTTGGTTGGTT  699

seq1  GGTTTTTGTTGTTGTTATTGTTGTTGTTTGTTGTTGCTGCTGCTGCTGCT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTGTTGTTGTTATTGTTGTTGTTTGTTGTTGCTGCTGCTGCTGCT  749

seq1  GTTTTACTCAGTTATTATCAGGCCTGTAGCCAGACAGCTGTCAATCCTTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACTCAGTTATTATCAGGCCTGTAGCCAGACAGCTGTCAATCCTTC  799

seq1  CTCCTCTTAACCTAACTTCACTGTACAGACTAGTCCTCAGAGAATCTTGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTAACCTAACTTCACTGTACAGACTAGTCCTCAGAGAATCTTGA  849

seq1  AAAGTGAGCTCACTGGCTACACTCAGAGTGTAGTTCCCAGTCTTCCTTTC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAGCTCACTGGCTACACTCAGAGTGTAGTTCCCAGTCTTCCTTTC  899

seq1  AGGGAATTC  901
      |||||||||
seq2  AGGGAATTC  908

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information