BAC Information

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BAC

Clone NameB6Ng01-303G02
Chromosome3 (Build37)
Map Location 144,896,309 - 145,061,329
singlet/doubletdoublet
Overlap geneCol24a1
Upstream geneLOC545572, Hs2st1, Sep15, LOC435761, Sh3glb1, LOC668890, Clca1, Clca2, Clca4, EG622139, AI747448, Clca6, Clca3, Clca5, Odf2l
Downstream gene2410019A14Rik, Cyr61, Ddah1, LOC100040331, Bcl10, 2410004B18Rik, Syde2, Wdr63, Mcoln3, Mcoln2, Edg7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303G02.bB6Ng01-303G02.g
ACCGA097194GA097195
length9451,111
definitionB6Ng01-303G02.b B6Ng01-303G02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,060,571 - 145,061,329)(144,896,309 - 144,897,409)
sequence
gaattcatcagggacaagccatacaacatctttctatagctcttcctctt
caagtaagaaatggaaaatggctgcttagcttcagggtgcatccttgcga
gaatgtgacatgaatattatcactcaggaaactatagcactcaggctagt
aaaacaacttttaacgggctttccctgtttttgaaaggaaaagatgcatt
agggaatggaaatgaaaatattctattttatgttaggctaacacatcgat
gcgtttatgacatattcactttaatttccctcaaggaaacatttgtttct
actcttgaccttgcggtttgaggttaaacatctccaaccctgaatataat
ggtagatgtgaaacagagactgaatttcgtcaacttgttcaatatctgta
gggatagtgattggtttagcagtgagcaaaggacagacttccctccccca
atttccaacttgagtggaactatggagtaagcagaagtgccagtaaaaat
gctcagataaagtaaaagacaccgcgtgtcgcttggaacattaatgtcgt
taaaatgcccagggtacagaccgagaccagcacattcaactgtaaaactc
cagagttgtctgctgtagaaatgtgaaaaaggcctaaaactcatgcagac
ccacaaaggatcccaaaagtacaaagtcttgccaagaaacatgaagctgg
agttgtcatgcttgctggccttaaaacatatcacacgccaggcgtggtgg
cgcacacctttgaatcccagcacttgagaggcagaggcaggtggatttct
gagttcgaggccagcctggtctacagagtgagttctaggacagccagggc
tatacagagaaaccctgtcttgaagaaaaaaaaaaaaacatatcacacaa
agatgctgaaatcaccaaaactgtaaactgccacaagaacatgca
gaattcaaacccattgagttcctggcttccagttttgagcaactcttgaa
tctttttccatatctgcaaaacatgtaagtttcccagacacaaatgtttg
tgctataatctgtcattgggagactgtccttgaagttcatagttctgaat
tcaaatgtcttcattgagccccttgaactaagcccatttctccatctaat
ggatggtcgcaggaactacctcataggatgatggaaacatagaaagtgta
gaccctcggtcactaaaggaagcatcatagcttctaggagatatttgtga
attgactgaatgtgttgaatgaatatacttagggatttttttttagatga
aacactgtgacaagggtgacaaggggaaaagtcatcttttctcacagttc
accacagcagcaggagcttgacacagctggtcccatcacagacatgaagg
ggaaacagaagggagaatgccttgttgatgctcagcctctctttgattcc
tatttaacaaggtccaggattctagtccagtgagcaggtcttactgcctc
aattaaggtattcagacacccaccggaggcatgcctagatgctcaccttc
catgtgattctagattctgaagagctgacaatgaacactaagcatcacac
attacaacgcattcatattgcaaatgtgaatacagatccacttattcagg
aagcacaagtggatgctgcacagacaatgatcaccaggctgacagcccag
gactgtcaatgtactccagggagagagatgtttgggggacttctgccccc
tttacttcctgcttcagcttctcctttccccagagatgatatttgagaac
tgggcatgtgcttggctcagtacataatgacatttggaatccattaaact
ctctgtcctggataggattttctggagtctaactcagatatgattttaaa
atactttatcatgcactgacagttccttctcccacacccttcctccaccc
cctacttcttcttcccctgactagtcaggctcagaagggaaattgatccc
tgaatagaacattgatctgtgttattcatcttgagattcagagatcttgc
ctgcagtactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_145060571_145061329
seq2: B6Ng01-303G02.b_47_805 (reverse)

seq1  AGGTGTGCGCCACCACGCCTGGCGTGTGATATGTTTTAAGGCCAGCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGCGCCACCACGCCTGGCGTGTGATATGTTTTAAGGCCAGCAAGC  50

seq1  ATGACAACTCCAGCTTCATGTTTCTTGGCAAGACTTTGTACTTTTGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAACTCCAGCTTCATGTTTCTTGGCAAGACTTTGTACTTTTGGGAT  100

seq1  CCTTTGTGGGTCTGCATGAGTTTTAGGCCTTTTTCACATTTCTACAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTGGGTCTGCATGAGTTTTAGGCCTTTTTCACATTTCTACAGCAG  150

seq1  ACAACTCTGGAGTTTTACAGTTGAATGTGCTGGTCTCGGTCTGTACCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCTGGAGTTTTACAGTTGAATGTGCTGGTCTCGGTCTGTACCCTG  200

seq1  GGCATTTTAACGACATTAATGTTCCAAGCGACACGCGGTGTCTTTTACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTTAACGACATTAATGTTCCAAGCGACACGCGGTGTCTTTTACTT  250

seq1  TATCTGAGCATTTTTACTGGCACTTCTGCTTACTCCATAGTTCCACTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAGCATTTTTACTGGCACTTCTGCTTACTCCATAGTTCCACTCAA  300

seq1  GTTGGAAATTGGGGGAGGGAAGTCTGTCCTTTGCTCACTGCTAAACCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAAATTGGGGGAGGGAAGTCTGTCCTTTGCTCACTGCTAAACCAAT  350

seq1  CACTATCCCTACAGATATTGAACAAGTTGACGAAATTCAGTCTCTGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATCCCTACAGATATTGAACAAGTTGACGAAATTCAGTCTCTGTTTC  400

seq1  ACATCTACCATTATATTCAGGGTTGGAGATGTTTAACCTCAAACCGCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTACCATTATATTCAGGGTTGGAGATGTTTAACCTCAAACCGCAAG  450

seq1  GTCAAGAGTAGAAACAAATGTTTCCTTGAGGGAAATTAAAGTGAATATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAGTAGAAACAAATGTTTCCTTGAGGGAAATTAAAGTGAATATGT  500

seq1  CATAAACGCATCGATGTGTTAGCCTAACATAAAATAGAATATTTTCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACGCATCGATGTGTTAGCCTAACATAAAATAGAATATTTTCATTT  550

seq1  CCATTCCCTAATGCATCTTTTCCTTTCAAAAACAGGGAAAGCCCGTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCCTAATGCATCTTTTCCTTTCAAAAACAGGGAAAGCCCGTTAAA  600

seq1  AGTTGTTTTACTAGCCTGAGTGCTATAGTTTCCTGAGTGATAATATTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTTTACTAGCCTGAGTGCTATAGTTTCCTGAGTGATAATATTCAT  650

seq1  GTCACATTCTCGCAAGGATGCACCCTGAAGCTAAGCAGCCATTTTCCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATTCTCGCAAGGATGCACCCTGAAGCTAAGCAGCCATTTTCCATT  700

seq1  TCTTACTTGAAGAGGAAGAGCTATAGAAAGATGTTGTATGGCTTGTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTTGAAGAGGAAGAGCTATAGAAAGATGTTGTATGGCTTGTCCCT  750

seq1  GATGAATTC  759
      |||||||||
seq2  GATGAATTC  759

seq1: chr3_144896309_144897409
seq2: B6Ng01-303G02.g_67_1177

seq1  GAATTCAAACCCATTGAGTTCCTGGCTTCCAGTTTTGAGCAACTCTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCCATTGAGTTCCTGGCTTCCAGTTTTGAGCAACTCTTGAA  50

seq1  TCTTTTTCCATATCTGCAAAACATGTAAGTTTCCCAGACACAAATGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCCATATCTGCAAAACATGTAAGTTTCCCAGACACAAATGTTTG  100

seq1  TGCTATAATCTGTCATTGGGAGACTGTCCTTGAAGTTCATAGTTCTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAATCTGTCATTGGGAGACTGTCCTTGAAGTTCATAGTTCTGAAT  150

seq1  TCAAATGTCTTCATTGAGCCCCTTGAACTAAGCCCATTTCTCCATCTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTCTTCATTGAGCCCCTTGAACTAAGCCCATTTCTCCATCTAAT  200

seq1  GGATGGTCGCAGGAACTACCTCATAGGATGATGGAAACATAGAAAGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTCGCAGGAACTACCTCATAGGATGATGGAAACATAGAAAGTGTA  250

seq1  GACCCTCGGTCACTAAAGGAAGCATCATAGCTTCTAGGAGATATTTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCGGTCACTAAAGGAAGCATCATAGCTTCTAGGAGATATTTGTGA  300

seq1  ATTGACTGAATGTGTTGAATGAATATACTTAGGGATTTTTTTTTAGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTGAATGTGTTGAATGAATATACTTAGGGATTTTTTTTTAGATGA  350

seq1  AACACTGTGACAAGGGTGACAAGGGGAAAAGTCATCTTTTCTCACAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGTGACAAGGGTGACAAGGGGAAAAGTCATCTTTTCTCACAGTTC  400

seq1  ACCACAGCAGCAGGAGCTTGACACAGCTGGTCCCATCACAGACATGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGCAGCAGGAGCTTGACACAGCTGGTCCCATCACAGACATGAAGG  450

seq1  GGAAACAGAAGGGAGAATGCCTTGTTGATGCTCAGCCTCTCTTTGATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGAAGGGAGAATGCCTTGTTGATGCTCAGCCTCTCTTTGATTCC  500

seq1  TATTTAACAAGGTCCAGGATTCTAGTCCAGTGAGCAGGTCTTACTGCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAACAAGGTCCAGGATTCTAGTCCAGTGAGCAGGTCTTACTGCCTC  550

seq1  AATTAAGGTATTCAGACACCCACCGGAGGCATGCCTAGATGCTCACCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGGTATTCAGACACCCACCGGAGGCATGCCTAGATGCTCACCTTC  600

seq1  CATGTGATTCTAGATTCTGAAGAGCTGACAATGAACACTAAGCATCACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGATTCTAGATTCTGAAGAGCTGACAATGAACACTAAGCATCACAC  650

seq1  ATTACAACGCATTCATATTGCAAATGTGAATACAGATCCACTTATTCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAACGCATTCATATTGCAAATGTGAATACAGATCCACTTATTCAGG  700

seq1  AAGCACAAGTGGATGCTGCACAGACAATGATCACCAGGCTGACAGCCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAAGTGGATGCTGCACAGACAATGATCACCAGGCTGACAGCCCAG  750

seq1  GACTGTCAATGTACTCCAGGGAGAGAGATGTTTGGGGGACTTCTGCCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCAATGTACTCCAGGGAGAGAGATGTTTGGGGGACTTCTGCCCCC  800

seq1  -TTACTTCCTGCTTCAGCTTCTCCTTTCCCCAGAGATGATA-TTGAGAAC  848
       |||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTACTTCCTGCTTCAGCTTCTCCTTTCCCCAGAGATGATATTTGAGAAC  850

seq1  TGGGCATGTGCTTGGCTCAGGTACATAATGACATTTGGAATCCATTAAAC  898
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGGGCATGTGCTTGGCTCA-GTACATAATGACATTTGGAATCCATTAAAC  899

seq1  TCTCTGTCCTGGATAGGATTTTCTGGAGTCTAACTCAGATATGATTT--A  946
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  TCTCTGTCCTGGATAGGATTTTCTGGAGTCTAACTCAGATATGATTTTAA  949

seq1  AATACTTTATCATGCACTGACAG-TCCTTCTCCCACACCCTTCCTCCA-C  994
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  AATACTTTATCATGCACTGACAGTTCCTTCTCCCACACCCTTCCTCCACC  999

seq1  CCCTACTTCTCTTCCCCCTGACTAGTCCAGGCTCAGAAGGGAAA-TGAT-  1042
      ||||||||||  | |||||||||||| ||||||||||||||||| |||| 
seq2  CCCTACTTCTTCTTCCCCTGACTAGT-CAGGCTCAGAAGGGAAATTGATC  1048

seq1  -CTGAATAG-ACATTGATCTGTGTATCATTC--CTGGAGATCCAGAGATC  1088
       |||||||| |||||||||||||  | ||||  || ||||| ||||||||
seq2  CCTGAATAGAACATTGATCTGTG--TTATTCATCTTGAGATTCAGAGATC  1096

seq1  T--GCTGCAGTACTG  1101
      |   |||||||||||
seq2  TTGCCTGCAGTACTG  1111