BAC Information

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BAC

Clone NameB6Ng01-303H20
Chromosome3 (Build37)
Map Location 18,545,868 - 18,547,016
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1, LOC622921, LOC100040153
Downstream geneArmc1, Mtfr1, Pde7a, Dnajc5b, EG620290, Trim55
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303H20.bB6Ng01-303H20.g
ACCGA097278GA097279
length1,1401,142
definitionB6Ng01-303H20.b B6Ng01-303H20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactaaacccatctggtcctggactttcttggttgggagact
tttaatgatagcttctatttcttcagggattatgggatggtttagatggt
atatctgatcctgattgaactttgctatttggtctagaaagttgtccatt
tcatgcagattttccagttttgttgaatatagacttttgtaataggatct
gtttttttttttaatttcctcagtttctgttgttatacctccattttcat
ttgtgactttgttaatttggatactgtctatgtgccctctggttattctg
gctaagggtttatctattttattgatttttctcaaataaccagttcctga
ttctttgtataattctttttgtttctacttggttgatttcagccttgagt
ttgattatttcctgccctctactcctcttgggtgtatttgcttctttttg
ttctagagctttcaggtgtgctgtcaagctgctagagtctgctctctcca
gtttctttttggagacacccagagatatgagttttcctcttaacactgct
tacattgtgttccataagtttgggtatttctgccttcattttcattaatt
tctaaagtctttaatttctttatttcttagttgaccaagatatcactgag
aggggcactgttcagctttcgtgtgtatgtgggcattctgttgtttttct
tattattgaagccttagtccatggtaatctgataggatgcatgggattat
ttcaatcttctcgtatctgttgaggcctgtttctgttttgtgaccaatta
tataatcaatttttgagaagataccatgaggtgctgagaagaaggtatat
ccttttttattggaatgaatgttctatagatatctgttaaatatatttgg
gttcacaacttctgttagtttcactgtgtctgtgtttagattgtgtttcc
atgggtctgtccgtgaagagagtaaatgtgttgaagttccctactatatc
tgtgatgtacaattgtatgctttgaaagtttcttttatgaaagtggggtg
ttcatgcatttgagtatagaattgtttggactagagttccccagaggctt
tgttctctagttgcatatatgtaggcagaaaggatgtgcc
gaattcccgagcttcctcccagcttcctccttccctagctttcccaaccc
tcagccggtcatcagcctgtcacattttcacctaaaatcatttgactcac
tgctcactcttctggtcactcctatcaaaggtcaacctgtgacaaaaagg
aagcttcactctatcccttcatcctacccccattcctataaatatcccta
gtctgcaagccaagtgacctttttggtttcccagtctgaagatgtccatg
acacaggttgttgcccatgaacccactctgttgtagaagctgtttcttat
aggcctttcactccactgatctttgaacaggagttcttaacacctaagtg
ttgatgggagtatttgcagctgtccttctataggatttctttttaagagg
gcagtcaaaatttaggctatagtctgcaatttggaaagtgattagaaagg
cttgaccttgtaaggcctgaactctattcccagctgtctctgcgctctaa
accaagggagccagactgcatttgtctggagatggtggaaaggagaaaat
tccaggacatatagcaagagaaggacctgaaccttgtaagatggtaaata
aagccctttcccgggtcttctgtaagccaaacaaggtggtgacaaagcct
gttttcccacagcagcagtgtgtgacaatcaggcctggactctcacaaag
ctgtctgggtagccagtgggtgcatcactcccaagaaggaaggggtgggg
gatggaggaaaagacactgtcttggatgcactccacaagccaagttggga
actacaggctcactcttgtcattttgtgtgtagtaatgaagcctgatgag
aggtctcctgcttgctcagagcccggctgttgtcctaaaatgcaaaccat
tgcctcgggccatggaaatcgggaacaagcagaggaccagaggctccggc
tgagcgccccactgctcatcctcgcttcagtgctggcaacttgtgcctga
aaagctggctttacccttgtacataggacacaggaaaaaaaaagggatta
taacatgtccagggccgggtgatttaattcctgaagttgtatagaacaca
aattaagatgggcggaagaatgccaagctcattcgcatagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18545868_18547016
seq2: B6Ng01-303H20.g_67_1208 (reverse)

seq1  GACT-TGCGAATGACTTGGGCATCCTTCCTCCCCATCTTTAATTTGTGTT  49
      |||| |||||||||  | ||||| |||||  |||||| ||||||||||||
seq2  GACTATGCGAATGAGCTTGGCATTCTTCC-GCCCATC-TTAATTTGTGTT  48

seq1  CTATACAACCTCAGGATTAAAATCACCGGCCCCTGGGACATTGTTTATTA  99
      ||||||||| |||||| | |||||||| | |||| ||||| ||||   ||
seq2  CTATACAACTTCAGGAATTAAATCACCCGGCCCT-GGACA-TGTT--ATA  94

seq1  ATCCTTTTTTTTTTTCCCTGTGTCCTTATGTACAAGGGTAAAGCCCAGCT  149
      |||| |||||||||  ||||||||| ||||||||||||||||| ||||||
seq2  ATCCCTTTTTTTTT--CCTGTGTCC-TATGTACAAGGGTAAAG-CCAGCT  140

seq1  TTTCAGGCACAAGTTGCCAGCACTGAAGCGAGGATGAGCAGTGGGGCGCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGCACAAGTTGCCAGCACTGAAGCGAGGATGAGCAGTGGGGCGCT  190

seq1  CAGCCGGAGCCTCT-GTCCTCTGCTTGTTCCCGA-TTCCATGGCCCGAGG  247
      |||||||||||||| ||||||||||||||||||| |||||||||||||||
seq2  CAGCCGGAGCCTCTGGTCCTCTGCTTGTTCCCGATTTCCATGGCCCGAGG  240

seq1  CAATGGTTTGCATTTTTAGGACAACAGCC-GGCTCTGAGCAAGCAGGAGA  296
      |||||||||||| |||||||||||||||| ||||||||||||||||||||
seq2  CAATGGTTTGCA-TTTTAGGACAACAGCCGGGCTCTGAGCAAGCAGGAGA  289

seq1  CCTCTCATCAGGCTTCATTACTACACACAAAATGACAAGAGTGAGCCTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCATCAGGCTTCATTACTACACACAAAATGACAAGAGTGAGCCTGT  339

seq1  AGTTCCCAACTTGGCTTGTGGAGTGCATCCAAGACAGTGTCTTTTCCTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCAACTTGGCTTGTGGAGTGCATCCAAGACAGTGTCTTTTCCTCC  389

seq1  ATCCCCCACCCCTTCCTTCTTGGGAGTGATGCACCCACTGGCTACCCAGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCACCCCTTCCTTCTTGGGAGTGATGCACCCACTGGCTACCCAGA  439

seq1  CAGCTTTGTGAGAGTCCAGGCCTGATTGTCACACACTGCTGCTGTGGGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTGTGAGAGTCCAGGCCTGATTGTCACACACTGCTGCTGTGGGAA  489

seq1  AACAGGCTTTGTCACCACCTTGTTTGGCTTACAGAAGACCCGGGAAAGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCTTTGTCACCACCTTGTTTGGCTTACAGAAGACCCGGGAAAGGG  539

seq1  CTTTATTTACCATCTTACAAGGTTCAGGTCCTTCTCTTGCTATATGTCCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTACCATCTTACAAGGTTCAGGTCCTTCTCTTGCTATATGTCCT  589

seq1  GGAATTTTCTCCTTTCCACCATCTCCAGACAAATGCAGTCTGGCTCCCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTCTCCTTTCCACCATCTCCAGACAAATGCAGTCTGGCTCCCTT  639

seq1  GGTTTAGAGCGCAGAGACAGCTGGGAATAGAGTTCAGGCCTTACAAGGTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGAGCGCAGAGACAGCTGGGAATAGAGTTCAGGCCTTACAAGGTC  689

seq1  AAGCCTTTCTAATCACTTTCCAAATTGCAGACTATAGCCTAAATTTTGAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTCTAATCACTTTCCAAATTGCAGACTATAGCCTAAATTTTGAC  739

seq1  TGCCCTCTTAAAAAGAAATCCTATAGAAGGACAGCTGCAAATACTCCCAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCTTAAAAAGAAATCCTATAGAAGGACAGCTGCAAATACTCCCAT  789

seq1  CAACACTTAGGTGTTAAGAACTCCTGTTCAAAGATCAGTGGAGTGAAAGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTTAGGTGTTAAGAACTCCTGTTCAAAGATCAGTGGAGTGAAAGG  839

seq1  CCTATAAGAAACAGCTTCTACAACAGAGTGGGTTCATGGGCAACAACCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAAGAAACAGCTTCTACAACAGAGTGGGTTCATGGGCAACAACCTG  889

seq1  TGTCATGGACATCTTCAGACTGGGAAACCAAAAAGGTCACTTGGCTTGCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGGACATCTTCAGACTGGGAAACCAAAAAGGTCACTTGGCTTGCA  939

seq1  GACTAGGGATATTTATAGGAATGGGGGTAGGATGAAGGGATAGAGTGAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGGATATTTATAGGAATGGGGGTAGGATGAAGGGATAGAGTGAAG  989

seq1  CTTCCTTTTTGTCACAGGTTGACCTTTGATAGGAGTGACCAGAAGAGTGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTTTGTCACAGGTTGACCTTTGATAGGAGTGACCAGAAGAGTGA  1039

seq1  GCAGTGAGTCAAATGATTTTAGGTGAAAATGTGACAGGCTGATGACCGGC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGAGTCAAATGATTTTAGGTGAAAATGTGACAGGCTGATGACCGGC  1089

seq1  TGAGGGTTGGGAAAGCTAGGGAAGGAGGAAGCTGGGAGGAAGCTCGGGAA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTTGGGAAAGCTAGGGAAGGAGGAAGCTGGGAGGAAGCTCGGGAA  1139

seq1  TTC  1149
      |||
seq2  TTC  1142