BAC Information

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BAC

Clone NameB6Ng01-303M08
Chromosome3 (Build37)
Map Location 21,890,268 - 22,024,659
singlet/doubletdoublet
Overlap geneLOC100040353, Tbl1xr1, LOC545506
Upstream geneEG665094, LOC100040325, 7530428D23Rik, LOC100039465
Downstream geneLOC675593, LOC100040378, LOC623751
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303M08.bB6Ng01-303M08.g
ACCGA097490GA097491
length1,184110
definitionB6Ng01-303M08.b B6Ng01-303M08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,890,268 - 21,891,614)(22,024,550 - 22,024,659)
sequence
gaattctaggtgagccagggctacatattggaatacacacacacacacac
acacacacacacaccgaaaagactattttagagatggagaaatggcttgg
taggtaaagcttgctgcacaagcatgagaatgtgagtttggatcccagca
cccacagaatgcagtggcatgcaaccataaccccagtgctgaggattaga
aacagggggatccctggggcttgctgaccgtctagtctaaacaaattggt
gaatccagatttagtgaacagcactgtctcaaaaacaaggtgagagtgaa
gaggacccccggcttacacacatgcacacatgtgtgagtacacattaagt
accttgggagaaatgaatccatagtgcaagaggatgccctacccgagtca
cagcctgcgctacggggaagcctggtacagtcctgagaagtcaggcacag
agccaggagcttggtccccctgcctttaagaactaccaatgcagaggcca
ccccactgagttctactctgtggccccagtggtttctctttcttgatcac
cacgaaggctgctgtgtgcccacattaactccccccccacccccaccccc
cgacttcctctttctttttctgttccttaacttctcttgtgccacctcct
ccacctgctttcttaatttcctcttctctgctcgtaatctaaatgtgagc
tttatcagatgggggtggctgggtcaaagtttgccataaccttgcgaagg
aagaaagagttttcttccaatttcatgccttaggatctgagcgacagcag
acacggcggcaaagtggggaaagaacattccttcttttcttgcccttcta
ataactggcactggtgtctaaagagacccattgacaccacagagctgtga
tgtcttgtgctttgcaattgaggaacacggattcaaatcaacccattctc
gacaaagaaaaatttatttgtagacataaggacccatgaagaacaactga
caaccactttcccttcattctgagcctgctctgtgaggctgaattccctc
cctgggttagagccatcccttgttctgttcctgtgggctacagagaagaa
aagctctgtgctgctcttatcctctgcaggcaagcctaccacaaggtaat
cctggaataagtctaggttttggtaaaaaacctc

agagggtcagtgagcagagactccacaacccaaatgcccatcagtacaaa
cagtaatgaatctgggagactaaaactcagattcagcttggggggtggag
ggtggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_21890268_21891614
seq2: B6Ng01-303M08.b_43_1226

seq1  GAATTCTAGGTGAGCCAGGGCTACATATTGGAATACACACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGTGAGCCAGGGCTACATATTGGAATACACACACACACACAC  50

seq1  ACACACACACACACCGAAAAGACTATTTTAGAGATGGAGAAATGGCTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACCGAAAAGACTATTTTAGAGATGGAGAAATGGCTTGG  100

seq1  TAGGTAAAGCTTGCTGCACAAGCATGAGAATGTGAGTTTGGATCCCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAAGCTTGCTGCACAAGCATGAGAATGTGAGTTTGGATCCCAGCA  150

seq1  CCCACAGAATGCAGTGGCATGCAACCATAACCCCAGTGCTGAGGATTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGAATGCAGTGGCATGCAACCATAACCCCAGTGCTGAGGATTAGA  200

seq1  AACAGGGGGATCCCTGGGGCTTGCTGACCGTCTAGTCTAAACAAATTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGGGATCCCTGGGGCTTGCTGACCGTCTAGTCTAAACAAATTGGT  250

seq1  GAATCCAGATTTAGTGAACAGCACTGTCTCAAAAACAAGGTGAGAGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAGATTTAGTGAACAGCACTGTCTCAAAAACAAGGTGAGAGTGAA  300

seq1  GAGGACCCCCGGCTTACACACATGCACACATGTGTGAGTACACATTAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACCCCCGGCTTACACACATGCACACATGTGTGAGTACACATTAAGT  350

seq1  ACCTTGGGAGAAATGAATCCATAGTGCAAGAGGATGCCCTACCCGAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGGAGAAATGAATCCATAGTGCAAGAGGATGCCCTACCCGAGTCA  400

seq1  CAGCCTGCGCTACGGGGAAGCCTGGTACAGTCCTGAGAAGTCAGGCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGCGCTACGGGGAAGCCTGGTACAGTCCTGAGAAGTCAGGCACAG  450

seq1  AGCCAGGAGCTTGGTCCCCCTGCCTTTAAGAACTACCAATGCAGAGGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGAGCTTGGTCCCCCTGCCTTTAAGAACTACCAATGCAGAGGCCA  500

seq1  CCCCACTGAGTTCTACTCTGTGGCCCCAGTGGTTTCTCTTTCTTGATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTGAGTTCTACTCTGTGGCCCCAGTGGTTTCTCTTTCTTGATCAC  550

seq1  CACGAAGGCTGCTGTGTGCCCACATTAACTCCCCCCCCACCCCCACCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAAGGCTGCTGTGTGCCCACATTAACTCCCCCCCCACCCCCACCCCC  600

seq1  CGACTTCCTCTTTCTTTTTCTGTTCCTTAACTTCTCTTGTGCCACCTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTTCCTCTTTCTTTTTCTGTTCCTTAACTTCTCTTGTGCCACCTCCT  650

seq1  CCACCTGCTTTCTTAATTTCCTCTTCTCTGCTCGTAATCTAAATGTGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGCTTTCTTAATTTCCTCTTCTCTGCTCGTAATCTAAATGTGAGC  700

seq1  TTTATCAGATGGGGGTGGCTGGGTCAAAGTTTGCCATAACCTTGCGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGATGGGGGTGGCTGGGTCAAAGTTTGCCATAACCTTGCGAAGG  750

seq1  AAGAAAGAGTTTTCTTCCAATTTCATGCCTTAGGATCTGAGCGACAGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAGTTTTCTTCCAATTTCATGCCTTAGGATCTGAGCGACAGCAG  800

seq1  ACACGGCGGCAAAGTGGGGAAAGAACATTCCTTCTTTTCTTGCCCTTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGGCGGCAAAGTGGGGAAAGAACATTCCTTCTTTTCTTGCCCTTCTA  850

seq1  ATAACTGGCACTGGTGTCTAAAGAGA-CCATTGACACCACAGAGCTGTGA  899
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATAACTGGCACTGGTGTCTAAAGAGACCCATTGACACCACAGAGCTGTGA  900

seq1  TGTCTTTGTGCTTTTGCAATTGAGGAACACGGATTCAAATCAACCCATTC  949
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGTC-TTGTGC-TTTGCAATTGAGGAACACGGATTCAAATCAACCCATTC  948

seq1  TCGACAAAGAAAAA-TTATTTGTAGACAT-AGGACCCATGAAGAACAACT  997
      |||||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  TCGACAAAGAAAAATTTATTTGTAGACATAAGGACCCATGAAGAACAACT  998

seq1  GACAACCACTT--CCTTCATTCTGAGCCTGCTCTGTGAGGCTG-ATTCCC  1044
      |||||||||||  |||||||||||||||||||||||||||||| ||||||
seq2  GACAACCACTTTCCCTTCATTCTGAGCCTGCTCTGTGAGGCTGAATTCCC  1048

seq1  TCCCTGGGTTTAGAGCCAT-CCTTGTCTGGTTCCTGTTGGGCCTACAGAG  1093
      |||||||| |||||||||| ||||||   ||||||||  || ||||||| 
seq2  TCCCTGGG-TTAGAGCCATCCCTTGTTCTGTTCCTGT--GGGCTACAGA-  1094

seq1  GAAGAAAAGCTCTGTGCTGGCTC-TAT-CTCTGCAGGCAAGCCTACCACA  1141
      |||||||||||||||||| |||| ||| ||||||||||||||||||||||
seq2  GAAGAAAAGCTCTGTGCT-GCTCTTATCCTCTGCAGGCAAGCCTACCACA  1143

seq1  ATGTTAATCTG--ATAAGTCTAGGTT----TGAAAAACCTCAGAACTCAA  1185
      | || |  |||  |||||||||||||    | |||||||||         
seq2  AGGTAATCCTGGAATAAGTCTAGGTTTTGGTAAAAAACCTC---------  1184

seq1  GCAGGGTGTGGTGGCGCACACCTTTAACTCGGGAGGCAGAGGCAGGCAGA  1235
                                                        
seq2  --------------------------------------------------  1184

seq1  TTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGAC  1285
                                                        
seq2  --------------------------------------------------  1184

seq1  AGGGCTATACAGGGAAACCCTGTCTCAAAAAACAAAAACAAACAAACAAA  1335
                                                        
seq2  --------------------------------------------------  1184

seq1  CAAAAAAACCTC  1347
                  
seq2  ------------  1184


seq1: chr3_22024550_22024659
seq2: B6Ng01-303M08.g_70_179 (reverse)

seq1  ACCCCCCACCCTCCACCCCCCAAGCTGAATCTGAGTTTTAGTCTCCCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCACCCTCCACCCCCCAAGCTGAATCTGAGTTTTAGTCTCCCAGA  50

seq1  TTCATTACTGTTTGTACTGATGGGCATTTGGGTTGTGGAGTCTCTGCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACTGTTTGTACTGATGGGCATTTGGGTTGTGGAGTCTCTGCTCA  100

seq1  CTGACCCTCT  110
      ||||||||||
seq2  CTGACCCTCT  110


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