BAC Information

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BAC

Clone NameB6Ng01-305B13
Chromosome3 (Build37)
Map Location 14,015,565 - 14,165,023
singlet/doubletdoublet
Overlap gene0710005M24Rik
Upstream geneLOC100039823, LOC100039861, LOC100041679, LOC100041667, LOC100039882
Downstream geneEG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305B13.bB6Ng01-305B13.g
ACCGA098473GA098474
length1,178900
definitionB6Ng01-305B13.b B6Ng01-305B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,015,565 - 14,016,757)(14,164,129 - 14,165,023)
sequence
gaattcttttgttattgagttacctcacttgggatgatatcctccagata
catccatttgcccaagaatttcataaattcattgtttttaaaagctgagt
agtactccattttgtaaatgtaccacattttctgtcagtggtgtcacgtg
cctttaatcccagcacttgggaggcataggcaggcaaatttctgagtttc
aggccagcctggtctactgaatatttgattttcaaattaaatcttttata
aataatattaaaattagatgaaaaataataatgctaacttgatttggttg
catttacttttgtgtattttaaatgttttgcaaattttaaagtatatttg
agcaagacaaaagatataaaggacaagttaagattctgattggacacata
tgtcctaatcatatttgaatccagagaaagaccttgctccacacattttc
aattcttggacttctctgttactgttgatatctatcttctgtcaaaacca
cgtcaacacacttcagctgagaataactttcagaacttggtaaatcactt
gccctacctgtccaattctatcttaatcccgttaaactgttctcagatgg
ttgggaagaagattgcattctttggctcaatttagattgtacatatatcc
ctgctccactgcagtcaagtcctctaatcttaccagaggaagtgattcta
ctttcttttctgattaagaacacctgttctcaattccacagttagggggg
gatgcgatgcagtggcatggtaaaaatgccgtacctaatgatgcagtttc
agccatcatgacgtatggatggaatgaaaagatgacaaagctactagcgg
atctgttcacaaaggaaaagaggctcagtttccaacagtctctggcattt
catctttggaaaacttgtcaaagctaagatgatttgtgagagtcctaact
cattttcctaaatatgaagtcgctattatggataaagaaaggttacatgg
agcatccatttccactctagtcattctgctgattgcacattagccctgca
ttcactgtgcattttactcatatggtctattatttgggaccactgaacat
atgatgcaattctttcttgacgaaaataatgctagtgataattagtaatt
cataataagctcataggactatagtacc
gaattcaagtgaaacaaagacatgtgtaatactttcttgcattttgacat
gagccttactagaatatttttgtgaaaacatgagcactaagaaagtttca
tgaattagattaagttcaaagaagaaagacaaaaacaactaatggaattg
aaggaatgccatgtgataggaaatagtcagaaatgaatctatagattaac
tctggtacaagaaaaaaaacatgaaaagagctgacatgactgggtcagat
ataagtacagaaagactagaacctcagcatagcacctttactgacatttc
atctcacttaattttataaatgaggaaaatgtgaagcttgagttacaccc
ttaaaaatgggtacatttttagtgggcggtggagaggttgagggtgtggg
ggcagggagcccagggtaacttctggggttgtcccagtggtcccagcgaa
gatggaggtggtgaaggagcagccactcgacctgggcccatgctacatgt
agctgcactacaatggcgaaggagcagaaggcatgatcagctcagctcat
gaccatgtgcacaagaccagaatggctatcaagaagatcagccccttcct
gtatcaaatctaatgtcagaacaggctgaggctgagggaaatccagaact
tgctgagattccaccatgagaatgtcattggcatgtgagacatcctcaga
gcacccaccctggaaggcatgaggcaagaaagtttacattggtcaagacc
tcatgaagacagacttgtacaagctgtttaagaaccaccagttgagcaat
tgtccacatcttgctacttcctctaccagatccctaagggcttcaggtac
atacacttcaacaccaggactcgaaccctccaatctgctagtcaacacct

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14015565_14016757
seq2: B6Ng01-305B13.b_43_1220

seq1  GAATTCTTTTGTTATTGAGTTACCTCACTTGGGATGATATCCTCCAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTTATTGAGTTACCTCACTTGGGATGATATCCTCCAGATA  50

seq1  CATCCATTTGCCCAAGAATTTCATAAATTCATTGTTTTTAAAAGCTGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTTGCCCAAGAATTTCATAAATTCATTGTTTTTAAAAGCTGAGT  100

seq1  AGTACTCCATTTTGTAAATGTACCACATTTTCTGTCAGTGGTGTCACGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCCATTTTGTAAATGTACCACATTTTCTGTCAGTGGTGTCACGTG  150

seq1  CCTTTAATCCCAGCACTTGGGAGGCATAGGCAGGCAAATTTCTGAGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCCCAGCACTTGGGAGGCATAGGCAGGCAAATTTCTGAGTTTC  200

seq1  AGGCCAGCCTGGTCTACTGAATATTTGATTTTCAAATTAAATCTTTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCCTGGTCTACTGAATATTTGATTTTCAAATTAAATCTTTTATA  250

seq1  AATAATATTAAAATTAGATGAAAAATAATAATGCTAACTTGATTTGGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATTAAAATTAGATGAAAAATAATAATGCTAACTTGATTTGGTTG  300

seq1  CATTTACTTTTGTGTATTTTAAATGTTTTGCAAATTTTAAAGTATATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACTTTTGTGTATTTTAAATGTTTTGCAAATTTTAAAGTATATTTG  350

seq1  AGCAAGACAAAAGATATAAAGGACAAGTTAAGATTCTGATTGGACACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGACAAAAGATATAAAGGACAAGTTAAGATTCTGATTGGACACATA  400

seq1  TGTCCTAATCATATTTGAATCCAGAGAAAGACCTTGCTCCACACATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAATCATATTTGAATCCAGAGAAAGACCTTGCTCCACACATTTTC  450

seq1  AATTCTTGGACTTCTCTGTTACTGTTGATATCTATCTTCTGTCAAAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTGGACTTCTCTGTTACTGTTGATATCTATCTTCTGTCAAAACCA  500

seq1  CGTCAACACACTTCAGCTGAGAATAACTTTCAGAACTTGGTAAATCACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAACACACTTCAGCTGAGAATAACTTTCAGAACTTGGTAAATCACTT  550

seq1  GCCCTACCTGTCCAATTCTATCTTAATCCCGTTAAACTGTTCTCAGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTACCTGTCCAATTCTATCTTAATCCCGTTAAACTGTTCTCAGATGG  600

seq1  TTGGGAAGAAGATTGCATTCTTTGGCTCAATTTAGATTGTACATATATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGAAGATTGCATTCTTTGGCTCAATTTAGATTGTACATATATCC  650

seq1  CTGCTCCACTGCAGTCAAGTCCTCTAATCTTACCAGAGGAAGTGATTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCACTGCAGTCAAGTCCTCTAATCTTACCAGAGGAAGTGATTCTA  700

seq1  CTTTCTTTTCTGATTAAGAACACCTGTTCTCAATTCCACAGTTAGGGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTCTGATTAAGAACACCTGTTCTCAATTCCACAGTTAGGGGGG  750

seq1  GATGCGATGCAGTGGCATGGTAAAAATGCCGTACCTAATGATGCAGTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCGATGCAGTGGCATGGTAAAAATGCCGTACCTAATGATGCAGTTTC  800

seq1  AGCCATCATGACGTATGGATGGAATGAAAAGATGACAAAGCTACTAGCGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCATGACGTATGGATGGAATGAAAAGATGACAAAGCTACTAGCGG  850

seq1  ATCTGTTCACAAAGGAAAAGAGGCTCAGTTTCCAACAGTCTCTGGCATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTCACAAAGGAAAAGAGGCTCAGTTTCCAACAGTCTCTGGCATTT  900

seq1  CATCTTTGGAAAACTTGTCAAAGCTAAGATGATTTGTGAGAGTCCTAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTGGAAAACTTGTCAAAGCTAAGATGATTTGTGAGAGTCCTAACT  950

seq1  CATTTTCCTAAATATGAAGTCGCTATTATGGATAAAGAAAGGTTACAATG  1000
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATTTTCCTAAATATGAAGTCGCTATTATGGATAAAGAAAGGTTAC-ATG  999

seq1  GAGCATCCATTTCCACTCTAGTCATTCTGCTTGATTGCACCAATTAGCCC  1050
      |||||||||||||||||||||||||||||| |||||||||  ||||||||
seq2  GAGCATCCATTTCCACTCTAGTCATTCTGC-TGATTGCAC--ATTAGCCC  1046

seq1  TGCATTCACTGTGCATTTTAACTTCATAATGGTCTATTATTT-GGACCAC  1099
      ||||||||||||||||||||   |||| |||||||||||||| |||||||
seq2  TGCATTCACTGTGCATTTTA--CTCAT-ATGGTCTATTATTTGGGACCAC  1093

seq1  TGACCATAATGATGCAATTCTTTCCTTGACGAAAATAAATGCTTAGTGAT  1149
      ||| ||| ||||||||||||||| |||||||||||| ||||| |||||||
seq2  TGAACAT-ATGATGCAATTCTTT-CTTGACGAAAAT-AATGC-TAGTGAT  1139

seq1  AAATAAGTAA-TCATAATTAAAGCTTTCATAGTACTTATAGTACC  1193
       ||| ||||| |||||||  ||||  |||||| || |||||||||
seq2  -AATTAGTAATTCATAAT--AAGC--TCATAGGAC-TATAGTACC  1178

seq1: chr3_14164129_14165023
seq2: B6Ng01-305B13.g_65_963 (reverse)

seq1  GGTGTTGACTAGCAGATTGGAGGGTTCGAGTCCTGGTGTTG-AGTGTATG  49
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGTGTTGACTAGCAGATTGGAGGGTTCGAGTCCTGGTGTTGAAGTGTATG  50

seq1  TACTTGAAGCCCTTA-GGATCTGGTAGAGGAAGTAGC-AGATGTGGAC-A  96
      ||| ||||||||||| ||||||||||||||||||||| |||||||||| |
seq2  TACCTGAAGCCCTTAGGGATCTGGTAGAGGAAGTAGCAAGATGTGGACAA  100

seq1  TTGCTCAACTGGTGGTTCTTAAACAGCTTGTACAAGTCTGTCTTCATGAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAACTGGTGGTTCTTAAACAGCTTGTACAAGTCTGTCTTCATGAG  150

seq1  GTCCTGACCAATGTAAACTTTCTTGCCTCATGCCTTCCAGGGTGGGTGCT  196
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGACCAATGTAAACTTTCTTGCCTCATGCCTTCCAGGGTGGGTGCT  200

seq1  CTGAGGATGTCTCACATGCCAATGACATTCTCATGGTGGAATCTCAGCAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGATGTCTCACATGCCAATGACATTCTCATGGTGGAATCTCAGCAA  250

seq1  GTTCTGGATTTCCCTCAGCCTCAGCCTGTTCTGACATTAGATTTGATACA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGATTTCCCTCAGCCTCAGCCTGTTCTGACATTAGATTTGATACA  300

seq1  GGAAGGGGCTGATCTTCTTGATAGCCATTCTGGTCTTGTGCACATGGTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGGCTGATCTTCTTGATAGCCATTCTGGTCTTGTGCACATGGTCA  350

seq1  TGAGCTGAGCTGATCATGCCTTCTGCTCCTTCGCCATTGTAGTGCAGCTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGAGCTGATCATGCCTTCTGCTCCTTCGCCATTGTAGTGCAGCTA  400

seq1  CATGTAGCATGGGCCCAGGTCGAGTGGCTGCTCCTTCACCACCTCCATCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGCATGGGCCCAGGTCGAGTGGCTGCTCCTTCACCACCTCCATCT  450

seq1  TCGCTGGGACCACTGGGACAACCCCAGAAGTTACCCTGGGCTCCCTGCCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTGGGACCACTGGGACAACCCCAGAAGTTACCCTGGGCTCCCTGCCC  500

seq1  CCACACCCTCAACCTCTCCACCGCCCACTAAAAATGTACCCATTTTTAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCTCAACCTCTCCACCGCCCACTAAAAATGTACCCATTTTTAAG  550

seq1  GGTGTAACTCAAGCTTCACATTTTCCTCATTTATAAAATTAAGTGAGATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAACTCAAGCTTCACATTTTCCTCATTTATAAAATTAAGTGAGATG  600

seq1  AAATGTCAGTAAAGGTGCTATGCTGAGGTTCTAGTCTTTCTGTACTTATA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCAGTAAAGGTGCTATGCTGAGGTTCTAGTCTTTCTGTACTTATA  650

seq1  TCTGACCCAGTCATGTCAGCTCTTTTCATGTTTTTTTTCTTGTACCAGAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCCAGTCATGTCAGCTCTTTTCATGTTTTTTTTCTTGTACCAGAG  700

seq1  TTAATCTATAGATTCATTTCTGACTATTTCCTATCACATGGCATTCCTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTATAGATTCATTTCTGACTATTTCCTATCACATGGCATTCCTTC  750

seq1  AATTCCATTAGTTGTTTTTGTCTTTCTTCTTTGAACTTAATCTAATTCAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCATTAGTTGTTTTTGTCTTTCTTCTTTGAACTTAATCTAATTCAT  800

seq1  GAAACTTTCTTAGTGCTCATGTTTTCACAAAAATATTCTAGTAAGGCTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTCTTAGTGCTCATGTTTTCACAAAAATATTCTAGTAAGGCTCA  850

seq1  TGTCAAAATGCAAGAAAGTATTACACATGTCTTTGTTTCACTTGAATTC  895
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAATGCAAGAAAGTATTACACATGTCTTTGTTTCACTTGAATTC  899