BAC Information

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BAC

Clone NameB6Ng01-306B20
Chromosome3 (Build37)
Map Location 76,701,790 - 76,702,925
singlet/doubletsinglet
Overlap genenone
Upstream geneGolph4, Fstl5
Downstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306B20.bB6Ng01-306B20.g
ACCGA099234GA099235
length9581,138
definitionB6Ng01-306B20.b B6Ng01-306B20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcactaaaacaacctggccctagattttcttggttcagagact
tttaatgagtccttctatctccttagcaggtataggacaattttacgtgg
tcttgaattaactttggtaagtggtatctatgaagaaaatcattcatttt
gtgtagattttccagttttgtggagtatatgattttgaagtaagacctaa
tgattttttggatgtcttcaatgtcttttacgtgattatttggatactgt
ctctgcattttaagttagtttggctatgggtttgtctatcttgttgatct
tctcaaagaaccagctcatggtttcattgattagttgcattattttcttt
gtttctaatgtattgatttcagcactgtttttgaatatttactgctgtta
cacctcttgggcaatgtttgcttaattctctggtctacagctttcaggtg
tgcttttaagttgcatgtatcagatctctccaatttctttatgaaggcac
ttaagtgaatgaacttttagtactgttttcattgtgttccctacattttt
gggatattgtgccgtcttcattctcattgactacaacacattcaattcta
gaaagtcttcaatttctttatttcttctttgacccagtgctcattcaaaa
gaggatgattcagtttgatgagtttgcaggttttctgctgtgtctgtttt
tgttaaagtccatctttaatttatggttgtcttataacatacaaggagtt
atttaaatttgcttatatctattgtggcttgctttgtgaccaactatata
gttgtttttagagaagtgtctgtgtatagtcttttgtgtttgggttaatg
ctcagtagttatgcccacttgatttttaacctctgtactttcatcatttc
tctgtttagtttctgtctgatcacatgcttatagtgaatatgaggtgctg
aagtttcc

gaattcaggccaccttaaactaaaccaataattgccttatggtatgtcat
agttgtaaacaaaaagataaattagatactggtcctctggaaatatcctc
atatgcatctacagtgtttgattgtggaagctgtcaatcatggcaatgga
ctgaatccctgaaactgtaaatgtttacctttataggtattgctttctca
tggtgtctattcatagaatggaaacgctaagatataaacaagcactagtt
tttctttcatttatttcttttttatttgtaagtcagcatacatcatgttt
cttctgatgattttcaacaataaacatgacattcatctgtcccaaggcat
tgagcattaaagttattatttacctaaacttctttcattatgaaaaatgt
tacacttgattttcaaaatatattaaataataatctataaatatcactaa
aatatgcttaccaccctttttaatggttctttcccttttttacattatat
gtttaaagcacatctacaacaaaaaacaattcattgaaaaatgtctatat
acacttttacctcccaacagctgcaaagtaaaaatattttgataaaatac
aaacatctcatctgtcatggtgaatatttgattagtagtcacaatttaaa
tatattagactcagataaaaccatgtagtatatattaatctgtgagaatt
cccaaaataattttcactatcacagtattaaagttaatgttggcagcact
tggaattttcatataatgagtaagcccaatgaaatacaacatatttatac
tgaaagtaaaaaacattatgtttgaactacataaaaactgctagcattta
cttcttcacattaacctgatattaaaagcaaagactctggtcattactac
tattatttattagatttcagatatattttgattccataatatgcaagccc
aatattaagaattcctaacaaattgtcacacaaatttgtaaacaagacac
atttaacccacagaagaagaaaaaaaccttactaaattagtttctattat
aatattgtagaactatctctttattgttatttacaacaatagctgttggt
tgtaatttcaattaatggagagtatatacatttatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76701790_76702925
seq2: B6Ng01-306B20.g_68_1205

seq1  GAATTCAGGCCACCTTAAACTAAACCAATAATTGCCTTATGGTATGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCCACCTTAAACTAAACCAATAATTGCCTTATGGTATGTCAT  50

seq1  AGTTGTAAACAAAAAGATAAATTAGATACTGGTCCTCTGGAAATATCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAAACAAAAAGATAAATTAGATACTGGTCCTCTGGAAATATCCTC  100

seq1  ATATGCATCTACAGTGTTTGATTGTGGAAGCTGTCAATCATGGCAATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATCTACAGTGTTTGATTGTGGAAGCTGTCAATCATGGCAATGGA  150

seq1  CTGAATCCCTGAAACTGTAAATGTTTACCTTTATAGGTATTGCTTTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCCCTGAAACTGTAAATGTTTACCTTTATAGGTATTGCTTTCTCA  200

seq1  TGGTGTCTATTCATAGAATGGAAACGCTAAGATATAAACAAGCACTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCTATTCATAGAATGGAAACGCTAAGATATAAACAAGCACTAGTT  250

seq1  TTTCTTTCATTTATTTCTTTTTTATTTGTAAGTCAGCATACATCATGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCATTTATTTCTTTTTTATTTGTAAGTCAGCATACATCATGTTT  300

seq1  CTTCTGATGATTTTCAACAATAAACATGACATTCATCTGTCCCAAGGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATGATTTTCAACAATAAACATGACATTCATCTGTCCCAAGGCAT  350

seq1  TGAGCATTAAAGTTATTATTTACCTAAACTTCTTTCATTATGAAAAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATTAAAGTTATTATTTACCTAAACTTCTTTCATTATGAAAAATGT  400

seq1  TACACTTGATTTTCAAAATATATTAAATAATAATCTATAAATATCACTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTGATTTTCAAAATATATTAAATAATAATCTATAAATATCACTAA  450

seq1  AATATGCTTACCACCCTTTTTAATGGTTCTTTCCCTTTTTTACATTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCTTACCACCCTTTTTAATGGTTCTTTCCCTTTTTTACATTATAT  500

seq1  GTTTAAAGCACATCTACAACAAAAAACAATTCATTGAAAAATGTCTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGCACATCTACAACAAAAAACAATTCATTGAAAAATGTCTATAT  550

seq1  ACACTTTTACCTCCCAACAGCTGCAAAGTAAAAATATTTTGATAAAATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTTACCTCCCAACAGCTGCAAAGTAAAAATATTTTGATAAAATAC  600

seq1  AAACATCTCATCTGTCATGGTGAATATTTGATTAGTAGTCACAATTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTCATCTGTCATGGTGAATATTTGATTAGTAGTCACAATTTAAA  650

seq1  TATATTAGACTCAGATAAAACCATGTAGTATATATTAATCTGTGAGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAGACTCAGATAAAACCATGTAGTATATATTAATCTGTGAGAATT  700

seq1  CCCAAAATAATTTTCACTATCACAGTATTAAAGTTAATGTTGGCAGCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAATAATTTTCACTATCACAGTATTAAAGTTAATGTTGGCAGCACT  750

seq1  TGGAATTTTCATATAATGAGTAAGCCCAATGAAATACAACATATTTATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTTTCATATAATGAGTAAGCCCAATGAAATACAACATATTTATAC  800

seq1  TGAAAGTAAAAAACATTATGTTTGAACTACATAAAAACTGCTAGCATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTAAAAAACATTATGTTTGAACTACATAAAAACTGCTAGCATTTA  850

seq1  CTTCTTCACATTAACCTGATATTAAAAGCAAAGACTCTGGTCATTACTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCACATTAACCTGATATTAAAAGCAAAGACTCTGGTCATTACTAC  900

seq1  TA-TATTTATTAGATTTCAAGATATATTTTGATTCCATAATATGCAAG-C  948
      || ||||||||||||||| ||||||||||||||||||||||||||||| |
seq2  TATTATTTATTAGATTTC-AGATATATTTTGATTCCATAATATGCAAGCC  949

seq1  CAATATTAAGAATTCCTAACAAATTGTCACAACAAATTGTAAACAAGACA  998
      |||||||||||||||||||||||||||||||  || ||||||||||||||
seq2  CAATATTAAGAATTCCTAACAAATTGTCACACAAATTTGTAAACAAGACA  999

seq1  CATTAAAACCCACAG-AGAAGAAAAAAACC-TACTAAATTAGTTTCTATT  1046
      ||||  ||||||||| |||||||||||||| |||||||||||||||||||
seq2  CATT-TAACCCACAGAAGAAGAAAAAAACCTTACTAAATTAGTTTCTATT  1048

seq1  AATAATTATTGTAGAACTTATCTCTTTATTGTTATTTACAAC-ATAGCTG  1095
       |||| ||||||||||| |||||||||||||||||||||||| |||||||
seq2  -ATAA-TATTGTAGAAC-TATCTCTTTATTGTTATTTACAACAATAGCTG  1095

seq1  TT-GTTGTTATTTTCAATAAT-GAAAATATATACATTTATCAG  1136
      || ||||| ||||  | |||| || | ||||||||||||||||
seq2  TTGGTTGTAATTTCAATTAATGGAGAGTATATACATTTATCAG  1138


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