MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-306D06
Chromosome	3 (Build37)
Map Location	82,513,761 - 82,687,890
singlet/doublet	doublet
Overlap gene	EG633285
Upstream gene	LOC100041901, Ctso, Tdo2, Accn5, Gucy1b3, Gucy1a3, Mtap9, Npy2r, LOC100041940
Downstream gene	Lrat, Fgg, Fga, Fgb, Plrg1, EG627094, Dchs2, 1700028M03Rik, LOC100042007, LOC100042091, Sfrp2, LOC633522, Tlr2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ctso (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229445 MGI:2139628
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tdo2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56720 MGI:1928486
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Accn5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58170 MGI:1929259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gucy1b3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54195 MGI:1860604
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gucy1a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60596 MGI:1926562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtap9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213582 MGI:2442208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npy2r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18167 MGI:108418
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041940 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041940
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG633285 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:633285 MGI:3645057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 23 Proteins

name	Lrat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:79235 MGI:1891259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fgg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99571 MGI:95526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fga (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14161 MGI:1316726
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fgb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110135 MGI:99501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plrg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53317 MGI:1858197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627094 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627094 MGI:3645328
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 1 Protein

name	Dchs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229459 MGI:2685263
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins

name	1700028M03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69460 MGI:1916710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100042007 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100042091 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042091
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Sfrp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20319 MGI:108078
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC633522 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633522
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Tlr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24088 MGI:1346060
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041901 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251232 GeneID:100041901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041901 transcript_id : XM_001477184.1

name	Ctso (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130454 GeneID:229445 MGI:2139628
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin O transcript_id : NM_177662.2

name	Tdo2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982696 GeneID:56720 MGI:1928486
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tryptophan 2,3-dioxygenase transcript_id : NM_019911.2

name	Accn5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130479 GeneID:58170 MGI:1929259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amiloride-sensitive cation channel 5, intestinal transcript_id : NM_021370.2

name	Gucy1b3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386430 GeneID:54195 MGI:1860604
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanylate cyclase 1, soluble, beta 3 transcript_id : NM_017469.3

name	Gucy1a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62990177 GeneID:60596 MGI:1926562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanylate cyclase 1, soluble, alpha 3 transcript_id : NM_021896.4

name	Mtap9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486996 GeneID:213582 MGI:2442208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule-associated protein 9 transcript_id : NM_001081230.1

name	Npy2r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375582 GeneID:18167 MGI:108418
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuropeptide Y receptor Y2 transcript_id : NM_008731.2

name	EG633285 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251237 GeneID:633285 MGI:3645057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 23 Proteins product : predicted gene, EG633285 transcript_id : XM_001477059.1

name	Lrat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386407 GeneID:79235 MGI:1891259
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase) transcript_id : NM_023624.3

name	Fgg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527077 GeneID:99571 MGI:95526
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibrinogen, gamma polypeptide transcript_id : NM_133862.1

name	Fga (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87239968 GeneID:14161 MGI:1316726
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibrinogen, alpha polypeptide transcript_id : NM_010196.2

name	Fgb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130602 GeneID:110135 MGI:99501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibrinogen, B beta polypeptide transcript_id : NM_181849.2

name	Plrg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801146 GeneID:53317 MGI:1858197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleiotropic regulator 1, PRL1 homolog (Arabidopsis) transcript_id : NM_016784.3

name	EG627094 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251234 GeneID:627094 MGI:3645328
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 1 Protein product : predicted gene, EG627094 transcript_id : XM_891750.3

name	Dchs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369681 GeneID:229459 MGI:2685263
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : dachsous 2 (Drosophila) transcript_id : XM_143371.6

name	1700028M03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251239 GeneID:69460 MGI:1916710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 1700028M03 gene transcript_id : XM_899790.3

name	LOC100042007 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251235 GeneID:100042007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to tau tubulin kinase 1 transcript_id : XM_001477370.1

name	Sfrp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677894 GeneID:20319 MGI:108078
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secreted frizzled-related protein 2 transcript_id : NM_009144.1

name	Tlr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981332 GeneID:24088 MGI:1346060
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : toll-like receptor 2 transcript_id : NM_011905.2

name	LOC100041901 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251233 GeneID:100041901
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477234.1

name	Ctso (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244082 CCDS:CCDS17426.1 GeneID:229445 MGI:2139628
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 product : cathepsin O protein_id : NP_808330.1

name	Tdo2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982697 CCDS:CCDS17427.1 GeneID:56720 MGI:1928486
definition	GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA]; GO:0004833 - tryptophan 2,3-dioxygenase activity [Evidence IEA] GO_process : GO:0006568 - tryptophan metabolism [Evidence IEA] codon_start : 1 note : tryptophan-2,3-dioxygenase product : tryptophan 2,3-dioxygenase protein_id : NP_064295.2

name	Accn5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946702 CCDS:CCDS17428.1 GeneID:58170 MGI:1929259
definition	GO_function : GO:0015280 - amiloride-sensitive sodium channel activity [Evidence ISS]; GO:0005216 - ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : amiloride-sensitive Na+ channel; amiloride-sensitive sodium channel; brain-liver-intestine amiloride-sensitive sodium channel product : amiloride-sensitive cation channel 5, intestinal protein_id : NP_067345.1

name	Gucy1b3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8567358 GeneID:54195 MGI:1860604
definition	GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA] codon_start : 1 note : soluble guanylate cyclase beta-1 subunit; beta 1 sGC product : guanylate cyclase 1, soluble, beta 3 protein_id : NP_059497.1

name	Gucy1a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981219 CCDS:CCDS17429.1 GeneID:60596 MGI:1926562
definition	GO_function : GO:0016829 - lyase activity [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA] codon_start : 1 note : alpha 1 sGC product : guanylate cyclase 1, soluble, alpha 3 protein_id : NP_068696.2

name	Mtap9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486997 GeneID:213582 MGI:2442208
definition	GO_component : GO:0005874 - microtubule [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 product : microtubule-associated protein 9 protein_id : NP_001074699.1

name	Npy2r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679122 GeneID:18167 MGI:108418
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004983 - neuropeptide Y receptor activity [Evidence IDA]; GO:0001601 - peptide YY receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : NPY-Y2 receptor product : neuropeptide Y receptor Y2 protein_id : NP_032757.1

name	EG633285 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251238 GeneID:633285 MGI:3645057
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477109.1

name	Lrat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963753 CCDS:CCDS17430.1 GeneID:79235 MGI:1891259
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0008374 - O-acyltransferase activity [Evidence IDA]; GO:0047173 - phosphatidylcholine-retinol O-acyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006653 - lecithin metabolism [Evidence TAS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA]; GO:0006776 - vitamin A metabolism [Evidence IDA] codon_start : 1 product : lecithin-retinol acyltransferase protein_id : NP_076113.1

name	Fgg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527078 GeneID:99571 MGI:95526
definition	GO_component : GO:0005577 - fibrinogen complex [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0030168 - platelet activation [Evidence IEA]; GO:0051258 - protein polymerization [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : gamma-fibrinogen; fibrinogen gamma-chain product : fibrinogen, gamma polypeptide protein_id : NP_598623.1

name	Fga (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563252 CCDS:CCDS17431.1 GeneID:14161 MGI:1316726
definition	codon_start : 1 note : fibrinogen, A alpha polypeptide product : fibrinogen, alpha polypeptide protein_id : NP_034326.1

name	Fgb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859809 CCDS:CCDS17432.1 GeneID:110135 MGI:99501
definition	codon_start : 1 product : fibrinogen, B beta polypeptide protein_id : NP_862897.1

name	Plrg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980791 CCDS:CCDS17433.1 GeneID:53317 MGI:1858197
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : pleiotropic regulator 1 protein_id : NP_058064.2

name	EG627094 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369680 GeneID:627094 MGI:3645328
definition	codon_start : 1 product : hypothetical protein protein_id : XP_896843.2

name	Dchs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369682 GeneID:229459 MGI:2685263
definition	codon_start : 1 note : overriding stop codons product : similar to cadherin protein protein_id : XP_143371.6 transl_except : (pos:83058311..83058313,aa:OTHER)

name	1700028M03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82890236 GeneID:69460 MGI:1916710
definition	codon_start : 1 product : hypothetical protein LOC69460 protein_id : XP_904883.1

name	LOC100042007 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251236 GeneID:100042007
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477420.1

name	Sfrp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677895 CCDS:CCDS17434.1 GeneID:20319 MGI:108078
definition	GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IGI]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0001756 - somitogenesis [Evidence IGI]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : stromal cell derived factor 5; secreted frizzled-related sequence protein 5 product : secreted frizzled-related sequence protein 2 protein_id : NP_033170.1

name	Tlr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981333 CCDS:CCDS17435.1 GeneID:24088 MGI:1346060
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IMP]; GO:0042892 - chloramphenicol transport [Evidence IMP]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0042535 - positive regulation of tumor necrosis factor-alpha biosynthesis [Evidence IMP]; GO:0008063 - Toll signaling pathway [Evidence IDA] codon_start : 1 exception : mismatches in translation product : toll-like receptor 2 protein_id : NP_036035.2

name	LOC100041940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041940
definition	number : 2 pseudo : _no_value

name	LOC100041940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041940
definition	number : 1 pseudo : _no_value

name	LOC100042091 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042091
definition	number : 1 pseudo : _no_value

name	LOC100042091 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042091
definition	number : 2 pseudo : _no_value

name	LOC100042091 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042091
definition	number : 3 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 1 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 2 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 3 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 4 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 5 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 6 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 7 pseudo : _no_value

name	LOC633522 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633522
definition	number : 8 pseudo : _no_value

clone name	MSMg01-488H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513C08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-109N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508P02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-186L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159H15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-184G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067C23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-444E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461B10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-291A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208N19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-306D06.b	B6Ng01-306D06.g
ACC	GA099302	GA099303
length	307	966
definition	B6Ng01-306D06.b	B6Ng01-306D06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(82,513,761 - 82,514,067)	(82,687,261 - 82,687,890)
sequence	acttcacaatgatcactgtccctagtcccttgcagtgagcttctaacaac ttcataaaaatgactaggctcttccttatctcagcctttagcactgattc taggataaaggatgctattagttatatgcctaaacaacatcagtattctg agagaaagaaacataggaaaaaactgcaagaagggagtatgcaaagctac aatttcctttatctcctttgatttagtgtcaaagtgctatgcactaagca agatttcaacctctgagaatatatatatatgtgtgtgtatgtgtgtgtgt gtgtgtg	gaattccaggccagccagaacaacatgaaaaggccttgactcaaaacaaa agcaaaaagcaggaaaataaaaaacaaaaaacaccctccccccaaaataa taggcagaatattttcttaattcaggggaagatgcagcaaaactatcctt cacaattgaaagaaaaataaaaacattccacagtaatcacaaactgaaag ctttcatgaccactaagctagcactagaaaagatacctgaagcaattcta cacactgaaaaataaacaaaacaaacaaacaaacaaaaaacatcatgagg tcatgaaaaagaagagagagtcagtaaatgagcaaatgagaattggaaat ctatcaaacatttaaaaaaaaacccaacaaaatgtcatgaattaatacat acttcataactctcaatgttagtgatctcaattcttcaatgataaaacaa actagcagagtggattaaaaatagctccccatctacttcttgcctgcaaa gaaaagcaaagtcttagagcccaatgcttggctgcaagcatctgcatctg tctgagtcagctgagggtagagtcacttagaggacagccatgcttggttc ctgtgtgcaagcactacatagcatcagtagtagtgtcagggtttggtacc cggcccatgagacagatcccaagttgtgcaagtcactggtcagtcattca gtcagtctttgctccattttgtccattttgaccctccatttcttttagac aggaacaatttggggtcaaaaatgttgaaggtgagttagcatccccatga atcccctggggtcctgtctgactactggagattttctcttcaggttcttt tctgaacattaatttttttatggaattttctccaaaatgtttttggatat aagtaattcttaacaataccaaaaaaaaaaaaaaaatagcttcttttact ctgtctcatcattggg
quality values	Open. Hide. 22 45 62 62 24 20 37 24 62 62 62 39 39 38 42 62 62 62 62 62 62 62 62 62 62 59 62 37 33 10 22 13 8 18 13 10 25 17 18 13 62 62 62 62 59 62 51 59 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 59 40 34 34 46 43 34 28 36 27 27 27 30 29 28 28 62 62 62 59 62 62 62 62 59 62 54 54 62 62 62 62 59 62 54 54 62 62 62 62 62 49 54 54 54 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 46 62 62 46 62 62 62 62 62 46 37 37 16 10	Open. Hide. 49 29 29 34 58 58 39 26 58 58 52 11 8 6 15 9 10 8 15 10 7 10 9 6 6 9 28 18 34 46 62 62 62 43 62 62 62 47 41 47 62 54 51 62 62 62 62 56 62 62 62 62 62 62 62 62 38 15 11 20 11 10 21 22 21 31 31 20 19 20 21 16 31 50 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 37 49 59 59 62 49 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 42 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 46 56 56 36 32 56 51 49 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 43 46 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 58 58 58 58 58 54 54 58 58 58 58 58 52 58 58 58 49 58 58 54 58 54 54 58 58 58 54 58 58 58 58 54 58 58 58 52 52 52 58 54 54 58 58 58 58 54 58 54 58 58 58 54 58 58 58 33 58 54 53 52 58 58 58 51 35 58 46 47 51 53 58 53 49 47 47 45 54 51 50 52 51 37 58 49 33 49 51 51 54 50 54 58 58 51 58 51 41 47 51 40 54 51 58 52 51 53 53 52 50 50 50 54 50 54 58 50 54 50 58 51 37 54 50 43 51 52 52 53 53 53 53 51 41 47 58 37 50 50 49 58 58 52 58 40 35 30 32 42 50 44 51 49 54 40 43 37 32 50 35 54 36 47 39 53 45 53 35 38 54 46 42 52 53 53 51 54 42 51 31 28 28 35 50 42 37 33 44 51 51 39 38 42 42 34 42 32 49 46 38 43 45 37 45 43 52 30 45 53 54 54 45 40 51 32 47 28 53 54 54 45 51 32 33 46 32 52 54 53 51 36 32 27 49 45 52 33 45 31 36 52 32 40 31 52 53 42 42 30 45 32 31 32 51 37 41 31 32 37 53 52 46 47 51 46 40 30 33 34 51 47 51 36 31 41 18 51 29 27 32 7 31 16 29 46 23 42 38 32 31 45 34 38 23 40 40 24 21 31 36 42 26 32 32 42 36 19 27 32 46 46 46 32 31 31 28 46 29 31 31 33 32 12 32 30 36 24 30 38 33 24 19 9 46 46 46 31 38 38 43 31 31 9 19 23 14 32 31 26 48 48 31 31 29 21 20 29 18 21 29 25 14 20 25 48 48 48 48 47 25 27 35 41 32 25 31 30 46 46 32 38 32 21 33 22 44 43 24 33 38 23 44 47 47 31 21 27 27 23 25 18 18 20 20 27 33 31 31 31 31 28 32 15 15 13 16 28 11 19 11 18 10 27 19 24 31 34 43 29 34 37 34 39 40 43 31 24 19 24 27 32 33 13 30 31 48 48 33 31 21 14 19 23 26 19 23 32 27 11 9 18 23 32 10 24 37 30

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_82513761_82514067
seq2: B6Ng01-306D06.b_54_360

seq1  ACTTCACAATGATCACTGTCCCTAGTCCCTTGCAGTGAGCTTCTAACAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACAATGATCACTGTCCCTAGTCCCTTGCAGTGAGCTTCTAACAAC  50

seq1  TTCATAAAAATGACTAGGCTCTTCCTTATCTCAGCCTTTAGCACTGATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAAAATGACTAGGCTCTTCCTTATCTCAGCCTTTAGCACTGATTC  100

seq1  TAGGATAAAGGATGCTATTAGTTATATGCCTAAACAACATCAGTATTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATAAAGGATGCTATTAGTTATATGCCTAAACAACATCAGTATTCTG  150

seq1  AGAGAAAGAAACATAGGAAAAAACTGCAAGAAGGGAGTATGCAAAGCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGAAACATAGGAAAAAACTGCAAGAAGGGAGTATGCAAAGCTAC  200

seq1  AATTTCCTTTATCTCCTTTGATTTAGTGTCAAAGTGCTATGCACTAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTTTATCTCCTTTGATTTAGTGTCAAAGTGCTATGCACTAAGCA  250

seq1  AGATTTCAACCTCTGAGAATATATATATATGTGTGTGTATGTGTGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCAACCTCTGAGAATATATATATATGTGTGTGTATGTGTGTGTGT  300

seq1  GTGTGTG  307
      |||||||
seq2  GTGTGTG  307

seq1: chr3_82687261_82687890
seq2: B6Ng01-306D06.g_67_696 (reverse)

seq1  CTACTGATGCTATGTAGTGCTTGCACACAGGAACCAAGCATGGCTGTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGATGCTATGTAGTGCTTGCACACAGGAACCAAGCATGGCTGTCCT  50

seq1  CTAAGTGACTCTACCCTCAGCTGACTCAGACAGATGCAGATGCTTGCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGACTCTACCCTCAGCTGACTCAGACAGATGCAGATGCTTGCAGC  100

seq1  CAAGCATTGGGCTCTAAGACTTTGCTTTTCTTTGCAGGCAAGAAGTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATTGGGCTCTAAGACTTTGCTTTTCTTTGCAGGCAAGAAGTAGAT  150

seq1  GGGGAGCTATTTTTAATCCACTCTGCTAGTTTGTTTTATCATTGAAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGCTATTTTTAATCCACTCTGCTAGTTTGTTTTATCATTGAAGAAT  200

seq1  TGAGATCACTAACATTGAGAGTTATGAAGTATGTATTAATTCATGACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCACTAACATTGAGAGTTATGAAGTATGTATTAATTCATGACATT  250

seq1  TTGTTGGGTTTTTTTTTAAATGTTTGATAGATTTCCAATTCTCATTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGGTTTTTTTTTAAATGTTTGATAGATTTCCAATTCTCATTTGCT  300

seq1  CATTTACTGACTCTCTCTTCTTTTTCATGACCTCATGATGTTTTTTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACTGACTCTCTCTTCTTTTTCATGACCTCATGATGTTTTTTGTTT  350

seq1  GTTTGTTTGTTTTGTTTATTTTTCAGTGTGTAGAATTGCTTCAGGTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTTGTTTATTTTTCAGTGTGTAGAATTGCTTCAGGTATCT  400

seq1  TTTCTAGTGCTAGCTTAGTGGTCATGAAAGCTTTCAGTTTGTGATTACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGTGCTAGCTTAGTGGTCATGAAAGCTTTCAGTTTGTGATTACTG  450

seq1  TGGAATGTTTTTATTTTTCTTTCAATTGTGAAGGATAGTTTTGCTGCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGTTTTTATTTTTCTTTCAATTGTGAAGGATAGTTTTGCTGCATC  500

seq1  TTCCCCTGAATTAAGAAAATATTCTGCCTATTATTTTGGGGGGAGGGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGAATTAAGAAAATATTCTGCCTATTATTTTGGGGGGAGGGTGT  550

seq1  TTTTTGTTTTTTATTTTCCTGCTTTTTGCTTTTGTTTTGAGTCAAGGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTTATTTTCCTGCTTTTTGCTTTTGTTTTGAGTCAAGGCCT  600

seq1  TTTCATGTTGTTCTGGCTGGCCTGGAATTC  630
      ||||||||||||||||||||||||||||||
seq2  TTTCATGTTGTTCTGGCTGGCCTGGAATTC  630

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information