MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-306E11
Chromosome	3 (Build37)
Map Location	16,931,717 - 16,932,681
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ythdf3, LOC100040034
Downstream gene	LOC100040059, EG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ythdf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229096 MGI:1918850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040034 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC100040059 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040059
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG383936 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383936 MGI:3643834
definition	note : predicted gene, EG383936 pseudo : _no_value

name	LOC622737 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	ENSMUSG00000074674 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100038486 MGI:3642301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs

name	LOC100040120 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Cypt12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75439 MGI:1922689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs

name	LOC545508 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545508
definition	note : heat shock protein 1, alpha-like pseudo : _no_value

name	Ythdf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46048311 GeneID:229096 MGI:1918850
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : YTH domain family 3 transcript_id : NM_172677.2

name	LOC100040034 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250833 GeneID:100040034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : similar to pol protein transcript_id : XM_001473985.1

name	ENSMUSG00000074674 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250835 GeneID:100038486 MGI:3642301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs product : predicted gene, ENSMUSG00000074674 transcript_id : XM_001474096.1

name	LOC100040120 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250837 GeneID:100040120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040120 transcript_id : XM_001474113.1

name	Cypt12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250811 GeneID:75439 MGI:1922689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs product : cysteine-rich perinuclear theca 12 transcript_id : XM_001472148.1

name	Ythdf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46048312 GeneID:229096 MGI:1918850
definition	codon_start : 1 exception : mismatches in translation product : YTH domain family 3 protein_id : NP_766265.2

name	LOC100040034 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250834 GeneID:100040034
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001474035.1

name	ENSMUSG00000074674 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250836 GeneID:100038486 MGI:3642301
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474146.1

name	LOC100040120 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250838 GeneID:100040120
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474163.1

name	Cypt12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250812 GeneID:75439 MGI:1922689
definition	codon_start : 1 product : cysteine-rich perinuclear theca 12 protein_id : XP_001472198.1

name	LOC100040059 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040059
definition	number : 2 pseudo : _no_value

name	LOC100040059 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040059
definition	number : 1 pseudo : _no_value

name	LOC622737 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622737
definition	number : 1 pseudo : _no_value

clone name	MSMg01-082K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484P11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-358F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351K01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-546K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179P08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-428G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102A23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-059C22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-048F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189E02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-306E11.b	B6Ng01-306E11.g
ACC	GA099358	GA099359
length	1,213	1,100
definition	B6Ng01-306E11.b	B6Ng01-306E11.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagttctgagccccattttttaatggggttatttgatt ttatggagtccaccttctttggttctttatattattggatattactgccc tatccgatttgggataggtaaagatcctttcccaatctgttggtggtctt tttgtcttattgactgtgtcttctgccttgcagaagctttgcaattttat gaggtcccatttgtctattctcgatcttacagcacaagccattgctgttc tgttcaggaatttttcccctgtacccaattctttgaggcttttccataat ttcctctctataagtttcagtgtctctggttttatgtggagttccttaat ccacttagatttgaccttagtacaaggagatagaaatggatcaatttgca ttgttgtacataataaccgccagttgtgccagcaccatttgttgaaaatg ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg accataggtgtgtgggttcatctctgggtcttcaattctgttccattggt ctacttgtctgtcactataccagtaccattcagttttgatcacaattgct ctgtagtacagttttaggtccggcatggtgattccaccagaggttctttt atacttgagaagagtttttgctatcctcatttttttgttattccagatga atccgctgattgccctttctaattcgttgaagaattgagttggaattttg atggggattgcatggaatctgtagattgcttttggcaagatggccatttt taaaatgttgatcctgccaatccatgagcatgggagatctttccatcttc tgagatcttctttaatttctttatttagagacttgaagttcttatcatac agatctttcacttccttagttagagtcacgcccaaggtatttttatagta tttgtgactattgagaaggtgttagttccctaaattctttctcagcctgt tatccttggtgtacaggaaaggccattgacttgtttgagtcattaatcca gctactttattggaagcctgtttatcaggcttagggagtcctctggtgga gcttgacgtcacttaatagtacctatcgagtatcacttgcaaaaagggaa tattgagatctcatctaatggaatccttgactctcattgtggtccacatg tgctcctggccct	gaattcaatcccagagccgaaagctttccatgtgcaaagtggtctactac tgagttacatcccagccctttctttgctcctttatcttctgtgacatttc ttttctccttttatccagactggcacagtatttcattgtttgtcatggtt tacttgagtaatgcaagtaagatattttgtggactgacaaataactctag gtgtaatttaccccctatgatatgacacaattaactaaaaattttcaaac tttgtaatgatacagtagaaatgaagtgcagttatcagtgagtcacatga taatatgactcatgataatttgttcatttggtaatatcttttaattttct ccttagtatcttctttttttttttttatttcacaatttgcaaattgaggg gaggcatgccaacactacagaaatgtttctcctcaaacatccctgtgcaa ctgatactcgagtagctgactgttgggaattttcaaattacttccttggt acatttgttaatttattcagtttttactgaaaaaaaaaaaaaaaaaccaa caacaacttcattttctcctttactagttgaagtatttacgagtatcaat atgagcttatggatatttttcattctatggatgatgtttagaggactttg gcttctcaaatcatgtgtgaaaacattgataatacttttttcggaataat atttattggaaaattcaattgaacatgtttccattacaattacctgatat ggtaaataaaaatgtttgacctggaccatgttagtggttgccagatttct ctcattcgttgtaatagaacatcagtccatgctcctataaataacttgtc ccctacctttctgtaagtagcactaatttcccattgactccccacacagg tacacacacatgcataacacaacacacataccacaatggaaggggagttg ctttgggaagaggcagttatattcagcaggagcaggcaaaaatagcatta tagaatgaaatatcaagcattgtatgcatgtaagaaatatgtcacagtca aatattatatatcatagtatatgttaatctaaactgtaaattatcacctg
quality values	Open. Hide. 58 24 29 29 58 54 45 58 58 37 54 58 26 10 45 58 58 54 47 54 62 62 62 62 62 62 33 62 62 62 42 39 33 27 20 18 32 30 30 43 43 43 62 44 62 62 62 47 44 62 62 62 62 59 62 62 62 62 62 62 59 56 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 59 59 62 62 62 49 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 49 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 49 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 49 62 62 54 54 58 58 58 54 54 58 58 58 58 58 58 58 58 58 54 52 58 58 52 54 40 54 52 58 58 58 58 37 35 58 52 58 58 49 58 54 58 58 58 54 58 49 38 52 58 54 54 54 54 58 52 58 58 58 58 54 52 54 58 52 32 58 58 58 52 54 58 52 54 52 52 37 58 58 58 58 50 54 41 52 49 58 58 58 54 54 52 58 46 51 49 54 51 50 53 52 51 49 40 52 49 50 50 54 46 58 58 51 40 49 53 58 58 58 50 50 40 50 46 52 32 58 48 58 58 50 51 53 52 58 50 53 34 53 52 46 52 52 50 58 58 50 53 35 58 50 53 53 42 58 40 32 41 58 54 50 58 36 21 50 42 44 28 48 58 33 39 46 28 44 48 50 50 43 58 49 41 50 50 40 58 51 51 50 54 30 58 53 42 58 32 47 49 58 58 58 37 36 50 38 52 52 52 53 52 42 52 58 58 49 49 49 46 33 41 36 33 50 39 43 50 31 32 41 28 42 54 37 45 49 54 25 42 54 35 37 14 32 28 15 54 39 34 33 44 53 35 27 33 38 44 40 37 52 54 42 44 53 33 53 32 25 49 51 53 32 53 53 52 37 47 26 24 54 54 49 40 40 30 52 54 54 38 16 10 36 29 28 32 42 41 49 32 37 40 43 39 51 35 42 22 28 12 46 25 17 41 52 52 52 52 33 25 33 35 30 31 28 53 22 12 24 28 23 53 49 49 31 46 53 52 30 31 41 24 33 22 31 33 28 33 30 35 28 42 26 30 30 15 22 24 31 30 31 10 32 22 31 30 46 33 33 18 17 17 31 41 46 26 29 42 31 31 31 31 42 31 31 21 31 19 38 29 25 31 31 32 35 46 28 26 30 23 46 24 31 31 46 31 22 20 46 29 25 13 32 24 26 28 21 43 26 29 30 26 31 33 29 20 16 27 31 33 30 24 30 32 33 30 22 31 31 33 46 26 22 19 23 20 31 30 31 25 20 38 22 34 21 38 24 31 21 19 31 18 26 25 25 44 14 25 18 25 48 14 15 7 44 32 41 6 15 18 16 21 16 27 25 36 27 31 31 27 32 31 26 26 12 23 13 16 15 29 4 4 5 15 27 7 16 32 24 37 10 11 25 16 8 10 32 9 7 10 13 17 40 29 18 16 22 27 10 37 34 27 21 33 24 8 16 31 27 29 24 9 5 4 8 8 15 27 13 13 7 30 28 14 14 25 8 24 11 10 14 12 21 28 26 8 9 6 11 17 11 11 6 3 3 4 5 3 6 11 4 6 15 8 20 21 8 7 22 18 28 12 16 24 28 12 11 24 23 16 10 16 12 6 6 28 7 8 5 11 18 11 10 12 15 6 21 8 9 7 6 7 18 6 4 6 6 7 22 14 5 20 9 6 1 3 5 9 1 2 1 5 6 11 8 7 2 2 7 6 4 9 5 4 6 6 6 12 6 4 6 5 15 5 7 6 6 11 4 3 4 9 21 7 5 16 17 29 10 6 4 5 4 13 5 4 5 10 2 3 6 2 2 5 5 5 2 3 3 1 7 9 3 3 3 1 4 5 9 9 2 4 14 18 5 3 4 5 3 1 3 12 5 10 4 9 5 4 6 20 4 6 5 5 8 4 9 6 4 4 7 9 22 6 17 4 4	Open. Hide. 62 47 51 47 62 47 39 47 62 62 51 39 24 20 24 26 34 32 27 43 45 56 62 56 49 62 62 62 59 39 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 54 54 59 56 59 49 59 59 54 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 59 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 62 62 62 56 56 62 56 62 54 62 62 54 48 62 62 62 54 62 62 62 62 62 62 62 46 46 62 62 62 62 62 54 62 62 46 46 62 62 54 62 62 62 58 54 54 54 36 52 54 54 58 58 54 58 54 58 58 52 58 58 58 58 41 58 58 54 54 58 58 58 58 54 42 58 58 58 46 42 58 58 54 54 54 54 58 58 58 58 58 58 58 58 52 54 54 52 58 58 58 58 52 42 58 45 41 58 45 52 54 58 58 46 54 53 58 58 58 46 50 58 58 58 49 58 58 58 49 49 41 58 58 58 58 58 58 51 50 47 34 42 42 38 48 54 41 48 50 37 47 48 51 47 50 37 48 58 58 48 43 50 44 39 50 50 49 32 43 44 44 33 50 48 44 58 50 50 50 39 41 43 39 42 35 28 58 32 39 52 51 49 47 49 50 50 49 50 51 47 54 50 49 40 37 50 50 33 30 39 51 49 44 44 44 35 41 51 49 52 53 42 41 43 28 50 39 30 47 39 51 36 41 34 50 30 52 40 39 35 18 44 51 44 38 44 32 51 46 39 41 39 44 54 33 35 40 39 39 50 34 52 32 37 52 50 42 42 40 30 52 45 37 31 26 39 38 25 35 40 52 51 51 54 51 54 45 52 21 45 31 34 29 21 30 31 37 54 37 27 32 25 42 12 44 54 54 37 36 47 29 18 29 35 37 32 30 32 33 23 42 45 34 53 28 31 32 26 35 32 31 31 24 35 32 41 30 37 35 33 39 39 20 23 27 41 46 13 46 51 31 24 34 51 51 51 36 26 30 20 51 22 29 31 14 30 31 31 19 9 9 18 21 24 32 25 30 43 35 24 31 16 20 30 10 9 30 28 11 31 17 47 29 27 26 31 31 31 24 22 32 31 31 38 34 31 19 34 27 22 32 32 38 29 31 31 32 32 34 43 24 31 26 25 26 31 31 26 31 34 22 31 24 24 48 38 24 25 27 31 21 25 28 24 37 48 48 33 20 21 15 24 10 41 33 31 24 42 22 28 30 26 33 38 28 32 16 13 18 30 28 23 48 29 11 42 14 14 17 23 34 16 14 8 6 38 38 7 7 7 4 4 4 6 14 34 13 20 11 16 11 14 6 11 14 21 21 16 17 11 11 13 22 9 5 4 4 7 6 5 5 11 8 23 15 37 29 18 20 22 32 18 21 26 10 9 13 32 39 10 21 7 12 18 22 27 19 32 10 23 40 21 9 9 4 3 7 13 10 18 24 27 6 5 9 5 6 16 13 20 20 28 5 17 8 22 9 22 6 11 15 5 21 47 47 40 16 24 13 19 15 18 13 11 19 24 7 6 5 16 22 20 29 34 12 5 3 8 5 2 14 8 19 10 25 9 15 7 7 14 23 20 9 16 21 8 20 10 10 10 28 9 9 7 7 15 18 12 4 7 6 9 17 8 24 29 16 9 7 11 9 3 1 1 5 4 14 18 13 9 11 5 3 5 1 1 5 10 7 14 4 5 8 16 4 7 18 17 8 5 3 3 2 2 4 4 2 4 18 12 5 7 9 5 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_16931717_16932681
seq2: B6Ng01-306E11.g_205_1166 (reverse)

seq1  CAGGTGATAATATTAAACAGTTTTTAGA-TAACATATACTTATGATATAT  49
      ||||||||||| |   ||||  |||||| |||||||||| ||||||||||
seq2  CAGGTGATAATTT---ACAG--TTTAGATTAACATATAC-TATGATATAT  44

seq1  AATATTTTAACTGTGACATA-TTCTTACATGCATACAATGCTTTGGATAA  98
      |||| ||| ||||||||||| ||||||||||||||||||||||  |||| 
seq2  AATA-TTTGACTGTGACATATTTCTTACATGCATACAATGCTT--GATA-  90

seq1  TTTTCA-TCTATAATTGCTATTTTTCCCCTGCTCCTGCTG-ATAT-ACTG  145
       ||||| ||||||| ||||||||||  ||||||||||||| |||| ||||
seq2  -TTTCATTCTATAA-TGCTATTTTT-GCCTGCTCCTGCTGAATATAACTG  137

seq1  CCTCTTCCC-AAGCAACTCCCCTTCCATTGTGGTATGTGTG-TGTG-TAT  192
      ||||||||| ||||||||||||||||||||||||||||||| |||| |||
seq2  CCTCTTCCCAAAGCAACTCCCCTTCCATTGTGGTATGTGTGTTGTGTTAT  187

seq1  GCATGTGTGTGTACTTGTGT-GGGAGTCAAT-GGAAATTAGTGCTACTTA  240
      |||||||||||||| ||||| |||||||||| ||||||||||||||||||
seq2  GCATGTGTGTGTACCTGTGTGGGGAGTCAATGGGAAATTAGTGCTACTTA  237

seq1  CAGAAAGGTAGGGGACAAGTTATTTATAGGAGCATGGACTGATGTTCTAT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGGTAGGGGACAAGTTATTTATAGGAGCATGGACTGATGTTCTAT  287

seq1  TACAACGAATGAGAGAAATCTGGCAACCACTAACATGGTCCAGGTCAAAC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACGAATGAGAGAAATCTGGCAACCACTAACATGGTCCAGGTCAAAC  337

seq1  ATTTTTATTTACCATATCAGGTAATTGTAATGGAAACATGTTCAATTGAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTTACCATATCAGGTAATTGTAATGGAAACATGTTCAATTGAA  387

seq1  TTTTCCAATAAATATTATTCCGAAAAAAGTATTATCAATGTTTTCACACA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAATAAATATTATTCCGAAAAAAGTATTATCAATGTTTTCACACA  437

seq1  TGATTTGAGAAGCCAAAGTCCTCTAAACATCATCCATAGAATGAAAAATA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGAGAAGCCAAAGTCCTCTAAACATCATCCATAGAATGAAAAATA  487

seq1  TCCATAAGCTCATATTGATACTCGTAAATACTTCAACTAGTAAAGGAGAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAGCTCATATTGATACTCGTAAATACTTCAACTAGTAAAGGAGAA  537

seq1  AATGAAGTTGTTGTTGGTTTTTTTTTTTTTTTTTCAGTAAAAACTGAATA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTTGTTGTTGGTTTTTTTTTTTTTTTTTCAGTAAAAACTGAATA  587

seq1  AATTAACAAATGTACCAAGGAAGTAATTTGAAAATTCCCAACAGTCAGCT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACAAATGTACCAAGGAAGTAATTTGAAAATTCCCAACAGTCAGCT  637

seq1  ACTCGAGTATCAGTTGCACAGGGATGTTTGAGGAGAAACATTTCTGTAGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGAGTATCAGTTGCACAGGGATGTTTGAGGAGAAACATTTCTGTAGT  687

seq1  GTTGGCATGCCTCCCCTCAATTTGCAAATTGTGAAATAAAAAAAAAAAAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCATGCCTCCCCTCAATTTGCAAATTGTGAAATAAAAAAAAAAAAA  737

seq1  GAAGATACTAAGGAGAAAATTAAAAGATATTACCAAATGAACAAATTATC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATACTAAGGAGAAAATTAAAAGATATTACCAAATGAACAAATTATC  787

seq1  ATGAGTCATATTATCATGTGACTCACTGATAACTGCACTTCATTTCTACT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCATATTATCATGTGACTCACTGATAACTGCACTTCATTTCTACT  837

seq1  GTATCATTACAAAGTTTGAAAATTTTTAGTTAATTGTGTCATATCATAGG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATTACAAAGTTTGAAAATTTTTAGTTAATTGTGTCATATCATAGG  887

seq1  GGGTAAATTACACCTAGAGTTATTTGTCAGTCCACAAAATATCTTACTTG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAATTACACCTAGAGTTATTTGTCAGTCCACAAAATATCTTACTTG  937

seq1  CATTACTCAAGTAAACCATGACAAA  965
      |||||||||||||||||||||||||
seq2  CATTACTCAAGTAAACCATGACAAA  962

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information