BAC Information

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BAC

Clone NameB6Ng01-306K02
Chromosome3 (Build37)
Map Location 55,799,239 - 55,799,496
singlet/doubletsinglet
Overlap genenone
Upstream geneCcna1, 4931419H13Rik, Spg20, A730037C10Rik, Sohlh2, Dclk1, Mab21l1, 4933417G07Rik
Downstream geneLOC100040139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306K02.bB6Ng01-306K02.g
ACCGA099608GA099609
length988258
definitionB6Ng01-306K02.b B6Ng01-306K02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctaaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccgaaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccaagtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggaggtaaaggg
ttggggagtttgaggcaactttgatctacagaatgagttccagaccacaa
gactacatagtgatgctctatcaatctttgaatgaatggctacacatgga
gatactcaaggagtatgaaggaagaaaggaaggaaggaaggaaggaagga
aggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggagtttag
atcacttactaggaagtttgatcagtgtttgctttgtgaaaggtatatta
ttttgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_55799239_55799496
seq2: B6Ng01-306K02.g_72_329 (reverse)

seq1  CAACAAAATAATATCCCTTTCACAAAGCAAACACTGATCAAACTTCCTAG  50
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAACAAAATAATATACCTTTCACAAAGCAAACACTGATCAAACTTCCTAG  50

seq1  TAAGTGATCTAAACTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGATCTAAACTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT  100

seq1  TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTCATACTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTCATACTCCT  150

seq1  TGAGTATCTCCATGTGTAGCCATTCATTCAAAGATTGATAGAGCATCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATCTCCATGTGTAGCCATTCATTCAAAGATTGATAGAGCATCACT  200

seq1  ATGTAGTCTTGTGGTCTGGAACTCATTCTGTAGATCAAAGTTGCCTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTCTTGTGGTCTGGAACTCATTCTGTAGATCAAAGTTGCCTCAAA  250

seq1  CTCCCCAA  258
      ||||||||
seq2  CTCCCCAA  258