BAC Information

Click to search

BAC

Clone NameB6Ng01-306P14
Chromosome3 (Build37)
Map Location 120,076,843 - 120,125,409
singlet/doubletdoublet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306P14.bB6Ng01-306P14.g
ACCGA099870GA099871
length9771,149
definitionB6Ng01-306P14.b B6Ng01-306P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,124,746 - 120,125,409)(120,076,843 - 120,077,992)
sequence
gaattcttcatttccttttaactatgctgaagatattacaatgcctaatt
ctaaattattctatagagcagcagtaatagaagcatcatggtattgacat
gaaaagaaacatgtaaaatagagaacacgagactaaaccaagtaggttag
aagaaaaataatacacttaataggtattgatgagaaacctgaatacctac
aagtagaggacacacacagatccccatatcccacccggtgcaaaaatcaa
tgtttatgtatcaaatttctcaatacaattctagagtttaaaagtactag
agaaaaaccttcaagatatagacatggacaatggaattgttaatagcact
ccaatagcctgagtaataacatcaagcattagcaaatagaatagcatttc
tttatcaatctgctcaacaatgaaaacaattaccagagtaaaggtatcat
ggataaaatgatagaaaggatatctgcccattcttcatctgacatgggat
taatagtcagaataatttttaaaaactcaataggccacacatcaaaacaa
taaacaatgcaatcaataagtggacaagtgaaccaaggcagctcgcagaa
gtggaaatggccaataaatagacgaaaaagtgttcaaatctttatgccat
cggaagaatgtaaatcaaaactgcactgagatttcaccccacccaagtaa
gaagggctatttgtaaaaatggagggcaacaaagttggaggggaaagcag
gccgaatagtgagaatgtaaaccattcatgcattattgcatttagaataa
agattcatgagacatataaaagtaccctggacatgaaggcacacacctat
ggtctcattactagaggggctgggacaggagaattaccacccatttcagg
ccaacctagggctacacagagaatgagagcagctagaactacaaagatat
gttaaaataataagcaaaccctaaagc
gaattcactgtattatttctttgagacatgactgtgaaagttgggattta
ttcttaattctatcaaccatcagtccaaaagtgttggacattgaatagtc
attttgaaaagtgatttgaaagtcaaacatattgtattaattattcgtgg
atttcttctatgcatacaatatgtattatttgggtcatatgtacctgtcc
ttccctgccctaactgctctcagactcactcctaccttcccaactttttc
caacttcatgtcctgggtttttagaatctactgagtcaactttgtgcata
tatctgaccacaatgaaacatgcttggctccaacaaccacatctgacaac
tctaatagcctttgtgtaccagtaaaaagaaactcaaaaacatatttccc
acattttctagaagaaccttcatgccccacataaagagcacagcttttta
ataatctttccttccttagagtgcagccttcatcactgcaggctttgcct
ttgggtcattgtcagctcctcagaaccccatctgaggttagcatcttaag
ctagatggcactggccttctagatcaaggaccacatttttgacaaatact
gtattgggacaatcagtttgacaaaattaagtagcatattactacacctt
ttcttctgcttgttttctgctgcctgttgctttaaggacacactgtggaa
gcatttccttatatccacggtgctatttttcttgatggtctgtgtcaaat
gttaggtttttttatttttatttttactgctgaaatgactgcctgttctt
caaaatcttgaggtggcaaaaatggacatttcctttcaactcattctcaa
aagtcacaaggattataaatagaggtttcacttgacatttttgccatgta
tgatcagatagataaatactataaaatgctgaaggtgcaattttgattac
tataagtattctcaaaacagatttagacttatcaaaactgtgatttattc
attctcagtcattcttgtccttttatttatataaatttttgtaaattgca
atgtgcttcagagtacattcccccctaagtttattacaatattttattag
tattcaataagaacaatcattctgtgcttatgctagaacaatggaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_120124746_120125409
seq2: B6Ng01-306P14.b_47_710 (reverse)

seq1  TTTACATTCTTCCGATGGCATAAAGATTTGAACACTTTTTCGTCTATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTCTTCCGATGGCATAAAGATTTGAACACTTTTTCGTCTATTTA  50

seq1  TTGGCCATTTCCACTTCTGCGAGCTGCCTTGGTTCACTTGTCCACTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCATTTCCACTTCTGCGAGCTGCCTTGGTTCACTTGTCCACTTATT  100

seq1  GATTGCATTGTTTATTGTTTTGATGTGTGGCCTATTGAGTTTTTAAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCATTGTTTATTGTTTTGATGTGTGGCCTATTGAGTTTTTAAAAAT  150

seq1  TATTCTGACTATTAATCCCATGTCAGATGAAGAATGGGCAGATATCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGACTATTAATCCCATGTCAGATGAAGAATGGGCAGATATCCTTT  200

seq1  CTATCATTTTATCCATGATACCTTTACTCTGGTAATTGTTTTCATTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATTTTATCCATGATACCTTTACTCTGGTAATTGTTTTCATTGTTG  250

seq1  AGCAGATTGATAAAGAAATGCTATTCTATTTGCTAATGCTTGATGTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATTGATAAAGAAATGCTATTCTATTTGCTAATGCTTGATGTTATT  300

seq1  ACTCAGGCTATTGGAGTGCTATTAACAATTCCATTGTCCATGTCTATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGCTATTGGAGTGCTATTAACAATTCCATTGTCCATGTCTATATC  350

seq1  TTGAAGGTTTTTCTCTAGTACTTTTAAACTCTAGAATTGTATTGAGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGTTTTTCTCTAGTACTTTTAAACTCTAGAATTGTATTGAGAAAT  400

seq1  TTGATACATAAACATTGATTTTTGCACCGGGTGGGATATGGGGATCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACATAAACATTGATTTTTGCACCGGGTGGGATATGGGGATCTGTG  450

seq1  TGTGTCCTCTACTTGTAGGTATTCAGGTTTCTCATCAATACCTATTAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCTCTACTTGTAGGTATTCAGGTTTCTCATCAATACCTATTAAGT  500

seq1  GTATTATTTTTCTTCTAACCTACTTGGTTTAGTCTCGTGTTCTCTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATTTTTCTTCTAACCTACTTGGTTTAGTCTCGTGTTCTCTATTTT  550

seq1  ACATGTTTCTTTTCATGTCAATACCATGATGCTTCTATTACTGCTGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTCTTTTCATGTCAATACCATGATGCTTCTATTACTGCTGCTCT  600

seq1  ATAGAATAATTTAGAATTAGGCATTGTAATATCTTCAGCATAGTTAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATAATTTAGAATTAGGCATTGTAATATCTTCAGCATAGTTAAAAG  650

seq1  GAAATGAAGAATTC  664
      ||||||||||||||
seq2  GAAATGAAGAATTC  664

seq1: chr3_120076843_120077992
seq2: B6Ng01-306P14.g_68_1216

seq1  GAATTCACTGTATTATTTCTTTGAGACATGACTGTGAAAGTTGGGATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTATTATTTCTTTGAGACATGACTGTGAAAGTTGGGATTTA  50

seq1  TTCTTAATTCTATCAACCATCAGTCCAAAAGTGTTGGACATTGAATAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATTCTATCAACCATCAGTCCAAAAGTGTTGGACATTGAATAGTC  100

seq1  ATTTTGAAAAGTGATTTGAAAGTCAAACATATTGTATTAATTATTCGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAAAAGTGATTTGAAAGTCAAACATATTGTATTAATTATTCGTGG  150

seq1  ATTTCTTCTATGCATACAATATGTATTATTTGGGTCATATGTACCTGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTATGCATACAATATGTATTATTTGGGTCATATGTACCTGTCC  200

seq1  TTCCCTGCCCTAACTGCTCTCAGACTCACTCCTACCTTCCCAACTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGCCCTAACTGCTCTCAGACTCACTCCTACCTTCCCAACTTTTTC  250

seq1  CAACTTCATGTCCTGGGTTTTTAGAATCTACTGAGTCAACTTTGTGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCATGTCCTGGGTTTTTAGAATCTACTGAGTCAACTTTGTGCATA  300

seq1  TATCTGACCACAATGAAACATGCTTGGCTCCAACAACCACATCTGACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGACCACAATGAAACATGCTTGGCTCCAACAACCACATCTGACAAC  350

seq1  TCTAATAGCCTTTGTGTACCAGTAAAAAGAAACTCAAAAACATATTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATAGCCTTTGTGTACCAGTAAAAAGAAACTCAAAAACATATTTCCC  400

seq1  ACATTTTCTAGAAGAACCTTCATGCCCCACATAAAGAGCACAGCTTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCTAGAAGAACCTTCATGCCCCACATAAAGAGCACAGCTTTTTA  450

seq1  ATAATCTTTCCTTCCTTAGAGTGCAGCCTTCATCACTGCAGGCTTTGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTTCCTTCCTTAGAGTGCAGCCTTCATCACTGCAGGCTTTGCCT  500

seq1  TTGGGTCATTGTCAGCTCCTCAGAACCCCATCTGAGGTTAGCATCTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCATTGTCAGCTCCTCAGAACCCCATCTGAGGTTAGCATCTTAAG  550

seq1  CTAGATGGCACTGGCCTTCTAGATCAAGGACCACATTTTTGACAAATACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGGCACTGGCCTTCTAGATCAAGGACCACATTTTTGACAAATACT  600

seq1  GTATTGGGACAATCAGTTTGACAAAATTAAGTAGCATATTACTACACCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGGGACAATCAGTTTGACAAAATTAAGTAGCATATTACTACACCTT  650

seq1  TTCTTCTGCTTGTTTTCTGCTGCCTGTTGCTTTAAGGACACACTGTGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTGCTTGTTTTCTGCTGCCTGTTGCTTTAAGGACACACTGTGGAA  700

seq1  GCATTTCCTTATATCCACGGTGCTATTTTTCTTGATGGTCTGTGTCAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCCTTATATCCACGGTGCTATTTTTCTTGATGGTCTGTGTCAAAT  750

seq1  GTTAGGTTTTTTTATTTTTATTTTTACTGCTGAAATGACTGCCTGTTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGTTTTTTTATTTTTATTTTTACTGCTGAAATGACTGCCTGTTCTT  800

seq1  CAAAATCTTGAGGTGGCAAAAATGGACATTTCCTTTCAACTCATTCTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCTTGAGGTGGCAAAAATGGACATTTCCTTTCAACTCATTCTCAA  850

seq1  AAGTCACAAAGGATTATAAATAGAGGTTTCACTTGACATTTTTGCCATGT  900
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAC-AAGGATTATAAATAGAGGTTTCACTTGACATTTTTGCCATGT  899

seq1  ATGATCAGATAGATAAATACTATAAAATGCTG-AGGTGCAATTTTGATTA  949
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATGATCAGATAGATAAATACTATAAAATGCTGAAGGTGCAATTTTGATTA  949

seq1  CTATAAGTATTCTCCAAAACAGATTTAAGAC-TATCAAAACTGTGATTTA  998
      ||||||||||||| |||||||||||| |||| ||||||||||||||||||
seq2  CTATAAGTATTCT-CAAAACAGATTT-AGACTTATCAAAACTGTGATTTA  997

seq1  TTCAATTCTCAGTCATTC-TGTCCTTT--ATTATATAAA-TTTTGTAAAT  1044
      ||| |||||||||||||| ||||||||   ||||||||| ||||||||||
seq2  TTC-ATTCTCAGTCATTCTTGTCCTTTTATTTATATAAATTTTTGTAAAT  1046

seq1  TGCATGTTGCTTCAGAAGTACATTCCCCCCCTAAATTTA-TACAATATTT  1093
      ||||   |||||||| |||||||| ||||||||| |||| ||||||||||
seq2  TGCAATGTGCTTCAG-AGTACATT-CCCCCCTAAGTTTATTACAATATTT  1094

seq1  TATTAGTATTC-ATAAGAACAATCAATTTCTGTGCTCAATGCTTAGACAA  1142
      ||||||||||| |||||||||||||  |||||||||  |||||   ||||
seq2  TATTAGTATTCAATAAGAACAATCA--TTCTGTGCT-TATGCTAGAACAA  1141

seq1  TGGAAATG  1150
      ||||||||
seq2  TGGAAATG  1149