BAC Information

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BAC

Clone NameB6Ng01-309P21
Chromosome3 (Build37)
Map Location 135,577,785 - 135,578,922
singlet/doubletsinglet
Overlap genenone
Upstream geneTacr3, LOC229837, LOC100039290, EG620439, Cenpe, Bdh2, C80638, 4933425K02Rik, Zcd2, Ube2d3, Manba, LOC668745, Nfkb1, ENSMUSG00000045520, Slc39a8
Downstream geneLOC100039350, LOC383923, Bank1, LOC100039477, LOC668868, Ppp3ca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309P21.bB6Ng01-309P21.g
ACCGA102096GA102097
length1,144815
definitionB6Ng01-309P21.b B6Ng01-309P21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcatcatcatctcaaacattagtccttcctaaagagtaatgaa
tcatggttacgaccctggctactgaaggtgggttttagaggctagttgca
gatatgtcagtctttggtcttcttcctcataagaaaatggagcaaaaatg
tttacatccctcaatcttcccaacttccgtcctctatagcgtgaaaaatt
gtgtgaacctctccaggctgacatgttttctcagtttattaattgctgca
agtacaactcaaacaaaattgtccttgatgttgaactttagagttctggc
tttataccaaagaaagatataaaatttctcaaagcaaaataaatttcagt
ggaaaaccctatggttatataatataataaatataatataatggtgtaat
acaatcatataatattatacataatatattagtagtaaatgacataatgt
tcaaattaaacaagaaatggttggatagctctaatgttcagctcaactta
tataaatcccagaagcacctatagtcagtactgactccagtttgttacta
gctgtctcactgtgcattctatacacccataagtttctagtcagtatttc
aaatgagaaatatatatatcattggcattaggagaaaggagaaaggagaa
aaggttaaggctttgcatttcctaggcagccacccttctgctgtggctag
aaatgacttctttgtcctccccacagttcacacatcacttgcttagaacc
ttaaggaaccttaaggctgataaaggaagtgaagaatattactgcttccc
actggtgatagcattcttccactctcctggtcctttccacatgcctcaag
aggcactcttaaagagatggagatgtaaatgctgtgggtctcacagctca
aaaaaatggagacattcacccatgattcttttctctctcaaaatcctgta
acttttttctccctgctgcatttctaattccttaactctgaagaaaagtc
gttctaaaaaatacaactgcttcactaacatgcccatcacagcacaccaa
cttctatagtgaatgtctaaacaaccactgaactgtattctaggaatatg
gagttttatggaaaatattcaaaaaggtgaagaaatttcaggac
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtctttttttttttttttttttttccattttt
tattaggtatttagctcatttacatttccaatgctataccaaaagtcccc
cttacccacccacccccactcccctacccacccactccccccctttggcc
ctggcgttcccctgtaccggggcacacaaagtctgcgtgtccaatgggcc
tctctttccagtgatggccgactaggccatcttttgatacatatgcagct
agagtcaagagctcaggggtactggttagttcataatgttgttccaccta
tagggttgaagatccctttagctccttgggtactttctctagctcctcca
ttgggagccctgtgatccatccattagctgactgtgagcatccacttctg
tgtttgctaggccccggcatagtctcacaaagagacagctacatctgggt
cctttcgataaaatcttgctagtatatgcaatggtgtcagcgttttggat
gctgattatggggtggatccctgggatatggcagtctctacatggtccat
cctttcatctcagctccaaactttgtttctgtaactccttccatgggtgt
tttgttcccacttctaaggaggggcatagtgtccacacttcagtcttcat
tttttcttgagtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_135577785_135578922
seq2: B6Ng01-309P21.b_48_1191 (reverse)

seq1  GTCCTGATATTTCTTCA-CTTTTTAAATATTTT-CATAAAACTCATTATT  48
      ||||||| ||||||||| |||||| |||||||| ||||||||||  ||||
seq2  GTCCTGAAATTTCTTCACCTTTTTGAATATTTTCCATAAAACTCCATATT  50

seq1  CCTAG-ATACAG-TCAGT-GTTGTTTAGAACAATTCACTATAGAATTTGG  95
      ||||| |||||| ||||| ||||||||||   ||||||||||||| ||||
seq2  CCTAGAATACAGTTCAGTGGTTGTTTAGA--CATTCACTATAGAAGTTGG  98

seq1  TGTGCTGTGAT-GGCATTGTAGTGAGGCAGTTGTA-TTTTTAGAACGACT  143
      ||||||||||| |||||  |||||| ||||||||| ||||||||||||||
seq2  TGTGCTGTGATGGGCATGTTAGTGAAGCAGTTGTATTTTTTAGAACGACT  148

seq1  TT--CTCAGAGTTAAGGAATTAGAAATGCAGCAGGGAGAAAAAAGTTTAC  191
      ||   |||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTCTTCAGAGTTAAGGAATTAGAAATGCAGCAGGGAGAAAAAAG-TTAC  197

seq1  AGGATTTTGAGAGAGAAAAGAATCATGGGTGAATGTCTCCATTTTTTTGA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTTGAGAGAGAAAAGAATCATGGGTGAATGTCTCCATTTTTTTGA  247

seq1  GCTGTGAGACCCACAGCATTTACATCTCCATCTCTTTAAGAGTGCCTCTT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAGACCCACAGCATTTACATCTCCATCTCTTTAAGAGTGCCTCTT  297

seq1  GAGGCATGTGGAAAGGACCAGGAGAGTGGAAGAATGCTATCACCAGTGGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATGTGGAAAGGACCAGGAGAGTGGAAGAATGCTATCACCAGTGGG  347

seq1  AAGCAGTAATATTCTTCACTTCCTTTATCAGCCTTAAGGTTCCTTAAGGT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTAATATTCTTCACTTCCTTTATCAGCCTTAAGGTTCCTTAAGGT  397

seq1  TCTAAGCAAGTGATGTGTGAACTGTGGGGAGGACAAAGAAGTCATTTCTA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCAAGTGATGTGTGAACTGTGGGGAGGACAAAGAAGTCATTTCTA  447

seq1  GCCACAGCAGAAGGGTGGCTGCCTAGGAAATGCAAAGCCTTAACCTTTTC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGCAGAAGGGTGGCTGCCTAGGAAATGCAAAGCCTTAACCTTTTC  497

seq1  TCCTTTCTCCTTTCTCCTAATGCCAATGATATATATATTTCTCATTTGAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTCCTTTCTCCTAATGCCAATGATATATATATTTCTCATTTGAA  547

seq1  ATACTGACTAGAAACTTATGGGTGTATAGAATGCACAGTGAGACAGCTAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGACTAGAAACTTATGGGTGTATAGAATGCACAGTGAGACAGCTAG  597

seq1  TAACAAACTGGAGTCAGTACTGACTATAGGTGCTTCTGGGATTTATATAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAACTGGAGTCAGTACTGACTATAGGTGCTTCTGGGATTTATATAA  647

seq1  GTTGAGCTGAACATTAGAGCTATCCAACCATTTCTTGTTTAATTTGAACA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCTGAACATTAGAGCTATCCAACCATTTCTTGTTTAATTTGAACA  697

seq1  TTATGTCATTTACTACTAATATATTATGTATAATATTATATGATTGTATT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCATTTACTACTAATATATTATGTATAATATTATATGATTGTATT  747

seq1  ACACCATTATATTATATTTATTATATTATATAACCATAGGGTTTTCCACT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATTATATTATATTTATTATATTATATAACCATAGGGTTTTCCACT  797

seq1  GAAATTTATTTTGCTTTGAGAAATTTTATATCTTTCTTTGGTATAAAGCC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTATTTTGCTTTGAGAAATTTTATATCTTTCTTTGGTATAAAGCC  847

seq1  AGAACTCTAAAGTTCAACATCAAGGACAATTTTGTTTGAGTTGTACTTGC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTAAAGTTCAACATCAAGGACAATTTTGTTTGAGTTGTACTTGC  897

seq1  AGCAATTAATAAACTGAGAAAACATGTCAGCCTGGAGAGGTTCACACAAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTAATAAACTGAGAAAACATGTCAGCCTGGAGAGGTTCACACAAT  947

seq1  TTTTCACGCTATAGAGGACGGAAGTTGGGAAGATTGAGGGATGTAAACAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACGCTATAGAGGACGGAAGTTGGGAAGATTGAGGGATGTAAACAT  997

seq1  TTTTGCTCCATTTTCTTATGAGGAAGAAGACCAAAGACTGACATATCTGC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTCCATTTTCTTATGAGGAAGAAGACCAAAGACTGACATATCTGC  1047

seq1  AACTAGCCTCTAAAACCCACCTTCAGTAGCCAGGGTCGTAACCATGATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGCCTCTAAAACCCACCTTCAGTAGCCAGGGTCGTAACCATGATTC  1097

seq1  ATTACTCTTTAGGAAGGACTAATGTTTGAGATGATGATGAGGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTCTTTAGGAAGGACTAATGTTTGAGATGATGATGAGGAATTC  1144