BAC Information

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BAC

Clone NameB6Ng01-310E21
Chromosome3 (Build37)
Map Location 77,641,798 - 77,642,827
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
Downstream geneEG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310E21.b
ACCGA102319
length1,020
definitionB6Ng01-310E21.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaaaagcaacaatttgtagacactggataatcaaagataattt
ataatcaccaaataatatgtcaaatcggcaccatttcttaagtcatcaca
gttgattactaacatgaaaaataagactttatagcatttttactcatggc
agaagtatgtaatgagagaaaataagaaagcgcataaaagatgtcactgt
ttcaaagccgggccataaacaagatacgaaaaggcttacaacccttcaac
ttacatgctaattagcatgatttgccatcctttaacaaatgaagccaggg
tttaaatgtgttgaaccattgagtaagatggaaattttaagaggaaatat
cagtgaactacaaaacctgggtgcttaaattaaatctgatttaaaaaata
ccaaagcaaacacttagttttatattcaactgtgcctttgataaatcagt
tttacacaccaattttccataagcatggatggtcaagtgataaatttgga
aagtttaagcgaagtccagctcatttaactatttactccacagaggcaga
acaattcctgtgtgtgctggctcatcatagactcattcctagaactcagt
cttgctgtgttttactctgtttgtcagacctacattacgaaataagtatt
tgccaatatatcatactttacacagagactcatgactaatagagactgat
atataggttagataggattatgttctatgggctggagggatgaatcagtg
gttaacagcactgactgctctttcagaggtcctgagttatctttccagca
acacctgatagctcaaggcaactgtaatggatctgaagacagctaccgag
tactcatatacataaatacattaataataataaagaaaagattaatcttt
tatatcagggtcaaatactcttccatggaaatcgttgaaaatctttgtga
acaaatctcatagcatacaccaggaatagcagcctatcatatgactgtag
atcaatctgatcggatgcat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77641798_77642827
seq2: B6Ng01-310E21.b_45_1064

seq1  GAATTCACAAAAGCAACAATTTGTAGACACTGTTTAATCAAAGATAATTT  50
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  GAATTCACAAAAGCAACAATTTGTAGACACTGGATAATCAAAGATAATTT  50

seq1  AGAATCACCAAATAATATGTCAAATCGGCACCATTTCTTAAGTCATCACA  100
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCACCAAATAATATGTCAAATCGGCACCATTTCTTAAGTCATCACA  100

seq1  GTTGATTACTAACATGAAAAATAAGACTTTATAGCATTTTTACTCATGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTACTAACATGAAAAATAAGACTTTATAGCATTTTTACTCATGGC  150

seq1  AGAAGTATGTAATGAGAGAAAATAAGAAAGCGCATAAAAGATGTCAGTGT  200
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGAAGTATGTAATGAGAGAAAATAAGAAAGCGCATAAAAGATGTCACTGT  200

seq1  TTCAAAGCCGGGCCATAAACAAAATACGAAAAGGCTTACAACCCTTCAAC  250
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCAAAGCCGGGCCATAAACAAGATACGAAAAGGCTTACAACCCTTCAAC  250

seq1  TTACATGCTAATTAGCATGATTTGCCATCCTTTAGCAAATGAAGCCAGGG  300
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTACATGCTAATTAGCATGATTTGCCATCCTTTAACAAATGAAGCCAGGG  300

seq1  TTTAAATGTGTTGAACCATTGAGTAAGATGGAAATTTTAAGAGGAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGTGTTGAACCATTGAGTAAGATGGAAATTTTAAGAGGAAATAT  350

seq1  CAGTGAACTACAAAACCTGGGTGCTTAAATTAAATCTGATTTAAAAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAACTACAAAACCTGGGTGCTTAAATTAAATCTGATTTAAAAAATA  400

seq1  CCAAAGCAAACACTTAGTTTTATATTCAGCTGTGCCTTTGATAAATCAGT  450
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCAAAGCAAACACTTAGTTTTATATTCAACTGTGCCTTTGATAAATCAGT  450

seq1  TTTACACACCAATTTTCCATAAGCATGGATGGTCAAGTGATAAATTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACACCAATTTTCCATAAGCATGGATGGTCAAGTGATAAATTTGGA  500

seq1  AAGTTTAAGCAAAGTCCAGCTCATTTAACTATTTACTCCACAGAGGCAGA  550
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAAGCGAAGTCCAGCTCATTTAACTATTTACTCCACAGAGGCAGA  550

seq1  ACAATTCCTGTGTGTGCTGGCTCAGCATAGACTCATTCCTAGAACTCAGT  600
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACAATTCCTGTGTGTGCTGGCTCATCATAGACTCATTCCTAGAACTCAGT  600

seq1  CTTGCTGTGTTTTACTCTGTTTGTCAGACCTACATTACAAAATAAGTATT  650
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTTGCTGTGTTTTACTCTGTTTGTCAGACCTACATTACGAAATAAGTATT  650

seq1  TGCCAATATTTCAAACTTTACCCAAAGACTCATGAATAATAGAGACTGAT  700
      ||||||||| ||| ||||||| || |||||||||| ||||||||||||||
seq2  TGCCAATATATCATACTTTACACAGAGACTCATGACTAATAGAGACTGAT  700

seq1  ATATAGGTTAGATAGGATTATGTTCTATGGGCTGGAGGGATGAATCAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGTTAGATAGGATTATGTTCTATGGGCTGGAGGGATGAATCAGTG  750

seq1  GTTAAAAGCACTGACTGCTCTTTCAGAGGTCCTGAGTTCACTTTCCAGCA  800
      ||||| ||||||||||||||||||||||||||||||||  ||||||||||
seq2  GTTAACAGCACTGACTGCTCTTTCAGAGGTCCTGAGTTATCTTTCCAGCA  800

seq1  ACCACCTGGTAGCTCAAAACCAACTGTAATGGATCTGAAGACAGCTACAG  850
      | |||||| |||||| ||  |||||||||||||||||||||||||||| |
seq2  A-CACCTGATAGCTC-AAGGCAACTGTAATGGATCTGAAGACAGCTACCG  848

seq1  TGTACTCATATACATAAAATAAATTAATAATAATAAAAGAAAAAAATTAA  900
       |||||||||||||| ||||| |||||||||||||||   |||| |||||
seq2  AGTACTCATATACAT-AAATACATTAATAATAATAAA--GAAAAGATTAA  895

seq1  GCTTTTTATGTCAAGGTCCAAATACTCTTCCATGGAAAT-GGTGAAAATC  949
       | |||||| ||| ||| ||||||||||||||||||||| | ||||||||
seq2  TC-TTTTATATCAGGGT-CAAATACTCTTCCATGGAAATCGTTGAAAATC  943

seq1  TTTGTGAAACAAATCTCATAGCATACACCAGGAAATAGCAGCCTAATCAT  999
      |||||| ||||||||||||||||||||||||| ||||||||||| |||||
seq2  TTTGTG-AACAAATCTCATAGCATACACCAGG-AATAGCAGCCT-ATCAT  990

seq1  ATGACTGTTGATTCAATCTGATCGGAGGCAT  1030
      |||||||| || |||||||||||||| ||||
seq2  ATGACTGTAGA-TCAATCTGATCGGATGCAT  1020