BAC Information

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BAC

Clone NameB6Ng01-310L12
Chromosome3 (Build37)
Map Location 68,396,513 - 68,397,674
singlet/doubletsinglet
Overlap geneSchip1
Upstream geneMfsd1, LOC667207, Gm412, EG208426, EG545531, LOC631379
Downstream geneIl12a, LOC639530, 1110032F04Rik, Ift80, Smc4, Trim59, LOC667272, Kpna4, Arl14, Ppm1l, LOC667309, B3galnt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310L12.bB6Ng01-310L12.g
ACCGA102623GA102624
length1,1621,181
definitionB6Ng01-310L12.b B6Ng01-310L12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcagaaaacgaaagatccccgctttgccagtaaggggaattat
agtacttgaaacccttggaatcagacgttctaaaaggagggctgagctgt
agtggtaatatctgtggccgcgaagatgtttgtaaacatctctgcttatg
gttgctctgtggtcatctatgctctgcgctgcagtgtttgcagagatccc
tgtttacagttggcctgtggtcatatgtgatctgctttttggtttgctcg
tgttctgtgcttttctgggaaagcgtcatgcccatgtcagagaagaaatt
gatacataggtctcatctcacactgtcttcgccacagtgcccactgtcag
tgttagtctgcacacgttttcccctcagtgtaaaagagaagaaagatata
ggaccagaaagcatatgttcaaaccctattcttctccatgccgatagggt
agcctgttgttacactcctcattttcaaaacagaagttattggagggtta
accatgatgtggctattattgctggctacattaccatcagccagaagctc
tgaactctctctgttaactcttcagtaaatagagattcttctccattctg
aactgaaaagaggcttccatgcacaaaagccaccagcaatgtgacagagg
aggcaagctattgacttagccaaccaaacacagctaaaagtccaaaggtc
aaattcccttaatatagcaaattgtaaactgtcagatctctgtagaaaaa
aaaaaaaaaagaaacaaacttaaggtacaagtcattccggggaaagaaaa
cacagcagcacaaacacttaagcagttattctttctgataaatggaagga
actgaactaagagaatacgcctgcctagcaactcaaaacaccagcaagca
ctcctgggtagctggaagcctgcggaagcctaactcctgggtagctggaa
gcctgcggaagcctaactcctgggtagctggaagccgggagaagccgggc
tttgcatcgctggtgggcaaatgacaggagcagctttccttgggagcact
ggtgacaggatgtgtcacgagctgcagcaatgttcacagcgggcagatct
ggccatcccactgcagggaactgaatccttagggagaatcagcggaacgt
gggcaggattta
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaaaagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctctcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgttgccgcctcagaagctctgtggctcttgccgggaaggtggc
tggttgtctggagctgaagatggtgccgccccagaatctctgtgactctc
tcacccgtcccagaaacggctggcactctgtattccacacggtcacccgt
gcagcctgccctccgcggagtcccggagccaagaaggctcccgccggcgc
ctgtgccacaaacctctcaggccaggcagacccccgtgctctcaccagga
aggtggccggctgtctggagctgaagatggcgccgcccagaagctctgca
actctctcgcccgtcccagaaacggctggcactctgtattccacacggtc
acccgtgcagcctgccctccgcggagtcccggagccaagaaaggctcccg
ccggcgcctgtgccacaaacctctcaagccaggcagacccccgtgctctc
accaggaaaggtggccggctgtctggagctgaagatggcgccgcccagaa
gctctgcgactctctcgcccgttccaagaaaacggctggcactctgtatt
ccacacgttcacccgtgcagctgccttcggcgagtcccgagcaagaagct
cccgctgcgctgttgcacaaacttctcagcaaggccagaaccccgtgctc
tcacagaaaggtgacgcctgtctggactgaagatgcgcgacaagagcatg
cgatctctctcgcggttccagaaaagacctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_68396513_68397674
seq2: B6Ng01-310L12.b_45_1206

seq1  GAATTCCTCAGAAAACGAAAGATCCCCGCTTTGCCAGTAAGGGGAATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGAAAACGAAAGATCCCCGCTTTGCCAGTAAGGGGAATTAT  50

seq1  AGTACTTGAAACCCTTGGAATCAGACGTTCTAAAAGGAGGGCTGAGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTGAAACCCTTGGAATCAGACGTTCTAAAAGGAGGGCTGAGCTGT  100

seq1  AGTGGTAATATCTGTGGCCGCGAAGATGTTTGTAAACATCTCTGCTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTAATATCTGTGGCCGCGAAGATGTTTGTAAACATCTCTGCTTATG  150

seq1  GTTGCTCTGTGGTCATCTATGCTCTGCGCTGCAGTGTTTGCAGAGATCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCTGTGGTCATCTATGCTCTGCGCTGCAGTGTTTGCAGAGATCCC  200

seq1  TGTTTACAGTTGGCCTGTGGTCATATGTGATCTGCTTTTTGGTTTGCTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAGTTGGCCTGTGGTCATATGTGATCTGCTTTTTGGTTTGCTCG  250

seq1  TGTTCTGTGCTTTTCTGGGAAAGCGTCATGCCCATGTCAGAGAAGAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTGCTTTTCTGGGAAAGCGTCATGCCCATGTCAGAGAAGAAATT  300

seq1  GATACATAGGTCTCATCTCACACTGTCTTCGCCACAGTGCCCACTGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATAGGTCTCATCTCACACTGTCTTCGCCACAGTGCCCACTGTCAG  350

seq1  TGTTAGTCTGCACACGTTTTCCCCTCAGTGTAAAAGAGAAGAAAGATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTCTGCACACGTTTTCCCCTCAGTGTAAAAGAGAAGAAAGATATA  400

seq1  GGACCAGAAAGCATATGTTCAAACCCTATTCTTCTCCATGCCGATAGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAGAAAGCATATGTTCAAACCCTATTCTTCTCCATGCCGATAGGGT  450

seq1  AGCCTGTTGTTACACTCCTCATTTTCAAAACAGAAGTTATTGGAGGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTTGTTACACTCCTCATTTTCAAAACAGAAGTTATTGGAGGGTTA  500

seq1  ACCATGATGTGGCTATTATTGCTGGCTACATTACCATCAGCCAGAAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGATGTGGCTATTATTGCTGGCTACATTACCATCAGCCAGAAGCTC  550

seq1  TGAACTCTCTCTGTTAACTCTTCAGTAAATAGAGATTCTTCTCCATTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCTCTCTGTTAACTCTTCAGTAAATAGAGATTCTTCTCCATTCTG  600

seq1  AACTGAAAAGAGGCTTCCATGCACAAAAGCCACCAGCAATGTGACAGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAAAGAGGCTTCCATGCACAAAAGCCACCAGCAATGTGACAGAGG  650

seq1  AGGCAAGCTATTGACTTAGCCAACCAAACACAGCTAAAAGTCCAAAGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGCTATTGACTTAGCCAACCAAACACAGCTAAAAGTCCAAAGGTC  700

seq1  AAATTCCCTTAATATAGCAAATTGTAAACTGTCAGATCTCTGTAGAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCCTTAATATAGCAAATTGTAAACTGTCAGATCTCTGTAGAAAAA  750

seq1  AAAAAAAAAAGAAACAAACTTAAGGTACAAGTCATTCCGGGGAAAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGAAACAAACTTAAGGTACAAGTCATTCCGGGGAAAGAAAA  800

seq1  CACAGCAGCACAAACACTTAAGCAGTTATTCTTTCTGATAAATGGAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGCACAAACACTTAAGCAGTTATTCTTTCTGATAAATGGAAGGA  850

seq1  ACTGAACTAAGAGAATACGCCTGCCTAGCAAACTCAAAACACCAGCAAGC  900
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACTGAACTAAGAGAATACGCCTGCCTAGC-AACTCAAAACACCAGCAAGC  899

seq1  ACTCCTGGGTAGCTGGAAGCCTGCGGAAGCCTAACTCCTGGGTAGCTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGGGTAGCTGGAAGCCTGCGGAAGCCTAACTCCTGGGTAGCTGGA  949

seq1  AGCCTGCGGAAGCCTAACTCCTGGGTAGCTGGAAGCCGGGAGAAGCC-GG  999
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGCCTGCGGAAGCCTAACTCCTGGGTAGCTGGAAGCCGGGAGAAGCCGGG  999

seq1  CTTTGCATCGCTGGTGGGCAAATGAACAGGAGCAGCTTTCCTTTGGAGCA  1049
      |||||||||||||||||||||||| |||||||||||||||||| ||||||
seq2  CTTTGCATCGCTGGTGGGCAAATG-ACAGGAGCAGCTTTCCTTGGGAGCA  1048

seq1  CT-GTGACAAGATGTGTCACGAGCTGCAGCAAATGTTCACAAGCGGCAGA  1098
      || |||||| |||||||||||||||||||| ||||||||||   ||||||
seq2  CTGGTGACAGGATGTGTCACGAGCTGCAGC-AATGTTCACAGCGGGCAGA  1097

seq1  TCTGGCAACCCCACTTCCAGGAACTGATTCCT--AGGAG-ATCAGCAGAC  1145
      |||||| | |||||| |  |||||||| ||||   |||| |||||| || 
seq2  TCTGGCCATCCCACTGCAGGGAACTGAATCCTTAGGGAGAATCAGCGGA-  1146

seq1  ATGTGGGCAGGGATTTA  1162
      | ||||||| |||||||
seq2  ACGTGGGCA-GGATTTA  1162