BAC Information

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BAC

Clone NameB6Ng01-312F04
Chromosome3 (Build37)
Map Location 77,352,524 - 77,353,697
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635
Downstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312F04.bB6Ng01-312F04.g
ACCGA103820GA103821
length9681,156
definitionB6Ng01-312F04.b B6Ng01-312F04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggaaagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaaataggaagtcaaaatatcactttttgcagatgata
tgatagtatatataagtgaccctaaaaattctaccagagaactcctaaac
ctgataaacagctttggtgaagtagctggatataaaattaactcaaacaa
gtcaatggcctttctctacacaaagaataagcaggctgagaaagaaatta
gggaaacaacacccttctcaatagtcacaaataatataaaatatcttggt
gtgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatt
tctgaagaaagaaattaaggaagatctcagaagatggaaagatctcccat
gctcatggattggccggatcaacattgtaaaaatggctatcttgccaaaa
gcaatctacagattcaatgcaatccccatcaaaattccaactcaattttt
caacgaattcgaaggagcaatttgcaaatttgtctggaataacaaaaaac
ctaggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatc
accatgccagacctaaagctttactacagagcaattgtgataaaaactgc
atggtactggtatagagacagacaagtagaccaatggtatagaattattt
gattattctatgatttactaatgctaccatttgataataatcaatcatgt
ctcttaattttttaaaaaaatattttattttgccagaatgtatgtatgta
tgtatgtatgtatgtatg

gaattctctatttagtcctataccccattttttaatttttttgaggggtg
gttaacttcttgggttctttatgtattttggatattatccctctatcaga
tgtggggcttgtgaagtttttttcccaatctgtaggttaccaatttgtct
tattgactatgtcctttgccttacagaagctttccagtttcatgaggtcc
catttatcaattcctgatcttagagcctgagccattctgagttttgttta
ggaaattgcccctcatgccaatgagttcaaggctctttcccactttctct
tcttttagattcagtggatatggttttaggttgaggtccttgatctgaat
ttattatattttaagatttatttaattattgtatttatgagtacactgtt
gctctctttagatacatcacaatagtgcattagatcccattgcagatggt
tatgagccactatgtggttgctgggaacagaactcaggacctccggaata
gcaatcagtgctcttactggctgaagcatctctccagcccatgtttgaat
gtcttaataccaagtttcttttttttttttttttttacttttttttcttt
tattaggtacttatttcaattacatttccaatgctatctcaaaagtcccc
cacacactccccctcccacttccccacctttctatagagtggttctcctg
agaaggaagactgacacatgctatgtctgtattttattagtcacatcatg
ccttctaaaagattgataatacaactgttattaaagacaattactattta
ctttttatgagaaataataaaagtaaaatttttatctcatgaccagtaga
aatcttaaaaaaaaaaaaatgcttcaagtcttcaattctgtttctaaact
aatcatgggtatttttgaagaaggcttaaggtatatggattccactatgc
atcaattctgcatctagtatttgtgatgataggactatatcctaacaaat
catatacacgagactattcataggatcttttgttattagaggcaaatcat
gctgtagtggttattttctggtgtcactggacttatattgggaatggatc
aatcggattggaaggctcacccgacctactaggctgggatagagttctct
gatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77352524_77353697
seq2: B6Ng01-312F04.g_66_1221

seq1  GAATTCTCTATTTAGTCCTATACCCCATTTTTTAATTTTTTTGAGGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATTTAGTCCTATACCCCATTTTTTAATTTTTTTGAGGGGTG  50

seq1  GTTAACTTCTTGGGTTCTTTATGTATTTTGGATATTATCCCTCTATCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTTCTTGGGTTCTTTATGTATTTTGGATATTATCCCTCTATCAGA  100

seq1  TGTGGGGCTTGTGAAGTTTTTTTCCCAATCTGTAGGTTACCAATTTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGCTTGTGAAGTTTTTTTCCCAATCTGTAGGTTACCAATTTGTCT  150

seq1  TATTGACTATGTCCTTTGCCTTACAGAAGCTTTCCAGTTTCATGAGGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACTATGTCCTTTGCCTTACAGAAGCTTTCCAGTTTCATGAGGTCC  200

seq1  CATTTATCAATTCCTGATCTTAGAGCCTGAGCCATTCTGAGTTTTGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATCAATTCCTGATCTTAGAGCCTGAGCCATTCTGAGTTTTGTTTA  250

seq1  GGAAATTGCCCCTCATGCCAATGAGTTCAAGGCTCTTTCCCACTTTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTGCCCCTCATGCCAATGAGTTCAAGGCTCTTTCCCACTTTCTCT  300

seq1  TCTTTTAGATTCAGTGGATATGGTTTTAGGTTGAGGTCCTTGATCTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAGATTCAGTGGATATGGTTTTAGGTTGAGGTCCTTGATCTGAAT  350

seq1  TTATTATATTTTAAGATTTATTTAATTATTGTATTTATGAGTACACTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATATTTTAAGATTTATTTAATTATTGTATTTATGAGTACACTGTT  400

seq1  GCTCTCTTTAGATACATCACAATAGTGCATTAGATCCCATTGCAGATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTTTAGATACATCACAATAGTGCATTAGATCCCATTGCAGATGGT  450

seq1  TATGAGCCACTATGTGGTTGCTGGGAACAGAACTCAGGACCTCCGGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGCCACTATGTGGTTGCTGGGAACAGAACTCAGGACCTCCGGAATA  500

seq1  GCAATCAGTGCTCTTACTGGCTGAAGCATCTCTCCAGCCCATGTTTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCAGTGCTCTTACTGGCTGAAGCATCTCTCCAGCCCATGTTTGAAT  550

seq1  GTCTTAATACCAAGTTTCTTTTTTTTTTTTTTTTTTACTTTTTTTTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAATACCAAGTTTCTTTTTTTTTTTTTTTTTTACTTTTTTTTCTTT  600

seq1  TATTAGGTACTTATTTCAATTACATTTCCAATGCTATCTCAAAAGTCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGTACTTATTTCAATTACATTTCCAATGCTATCTCAAAAGTCCCC  650

seq1  CACACACTCCCCCTCCCACTTCCCCACCTTTCTATAGAGTGGTTCTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTCCCCCTCCCACTTCCCCACCTTTCTATAGAGTGGTTCTCCTG  700

seq1  AGAAGGAAGACTGACACATGCTATGTCTGTATTTTATTAGTCACATCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAGACTGACACATGCTATGTCTGTATTTTATTAGTCACATCATG  750

seq1  CCTTCTAAAAGATTGATAATACAACTGTTATTAAAGACAATTACTATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAAAAGATTGATAATACAACTGTTATTAAAGACAATTACTATTTA  800

seq1  C-TTTTATGAGAAATAATAAAAGTAAAATTTTTATCTCATGACCAGTAGA  849
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATGAGAAATAATAAAAGTAAAATTTTTATCTCATGACCAGTAGA  850

seq1  AATCTT-AAAAAAAAAAAATGCTTCAAGTCTTCAAATTCTGTTTCTAAAA  898
      |||||| |||||||||||||||||||||||||| |||||||||||| |||
seq2  AATCTTAAAAAAAAAAAAATGCTTCAAGTCTTC-AATTCTGTTTCT-AAA  898

seq1  CTAAATCATGGGTATTTTTGAAGAAGGCTTAAGGTATATGGATTCCACTA  948
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CT-AATCATGGGTATTTTTGAAGAAGGCTTAAGGTATATGGATTCCACTA  947

seq1  TGCATCAATTCTGCATCTAGTTATTTGTGAATGATAAGACTATATCCTAA  998
      |||||||||||||||||||| |||||||| |||||| |||||||||||||
seq2  TGCATCAATTCTGCATCTAG-TATTTGTG-ATGATAGGACTATATCCTAA  995

seq1  CAAATCATATACAACGAGACTATTCATAGGATCTTTGTTAATTAGAGGCC  1048
      |||||||||||| |||||||||||||||||||||||  | |||||||| |
seq2  CAAATCATATAC-ACGAGACTATTCATAGGATCTTTTGTTATTAGAGG-C  1043

seq1  AAATCATGGTGTAGTGGTTA-TTTCTGGTTGTCAACTTGAC-TATATTTG  1096
      |||||||| ||||||||||| ||||||| |||| ||| ||| |||||| |
seq2  AAATCATGCTGTAGTGGTTATTTTCTGG-TGTC-ACTGGACTTATATTGG  1091

seq1  GAATGAATTACAATCCAGAATTAGAAGGCTCACCCAGGACCCTTATCTAG  1146
      ||||| ||  |||||  | ||| ||||||||||||  ||||  || ||  
seq2  GAATGGAT--CAATC--GGATTGGAAGGCTCACCC--GACC--TA-CT--  1130

seq1  AGGCTGGGAGATAGAAGTTTCTGATCTG  1174
      |||||||  ||||||  | |||||||||
seq2  AGGCTGG--GATAGAGTTCTCTGATCTG  1156


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