BAC Information

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BAC

Clone NameB6Ng01-312K19
Chromosome3 (Build37)
Map Location 49,728,827 - 49,729,395
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666230, 4932443G14, LOC545519, LOC676568, LOC666247, LOC100039579, LOC100039587, LOC638779, Pcdh18
Downstream geneLOC100039628, LOC639469, Slc7a11, EG621304, LOC100039667
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312K19.bB6Ng01-312K19.g
ACCGA104085GA104086
length489563
definitionB6Ng01-312K19.b B6Ng01-312K19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctctttctatattttgggctctctgctacttacattaactgttttaatat
ttttcttaaaaaattttatttagttaaagtatacgagtgcgctgtcattt
cttcagatacaccagaagagggaattagatcccatgtggttgctgggaat
tgaacttaggacctctggaagagcagccagtgctcttaactgctgacaca
cttctttccaagccatggggaccactgcagaagaggaggcagaaagattg
cagaaacacaagctctgggggtactggttagttcatattgttgttccacc
tatagagttgcagactctttcagctctttgggtactttctctagctcctc
cattgggggccctgcgttccatccaatagttgactgtgagcatccacttc
tgtgttagccaggcactggtatagcctcacaagagacagctatatcaggg
tccagaagtgggagtgggtgggtaagggagcagggtggg

tctatttggcttgaaaataataaaaccccatcaatattaagcaaactgtg
ttaatttctttatcattaattgcattgatttctgtttttataaacataat
ttaaatatgaatatttttgaatgccataataattcatatatgtgtaaacc
tacaagattacaagtcaccatttttatttcattggtgaatgctttcactg
gctcagtcttaataggatgagagtgatatagagaaaagtaatgagccttc
aaactataaagattggacagcttaatacttttaacttagacatcatctgt
tatggaagataatatatatagtgccaatatgatatgagattatggcccag
aaaggcagagaaagagaagttgaggttgtcttagaggttctgtcctcagc
accctatgaagacaactgtgtttaacatccaagaagagaaaaagattcaa
aagatatttttctctcatgtgaccaacactggtaactgtaactattctga
aggtttgggacataagaaagtaatcacaaaaggggagggagggagggaca
tgggagggaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_49728827_49729395
seq2: B6Ng01-312K19.g_65_633

seq1  GAATTCTCTATTTGGCTTGAAAATAATAAAACCCCATCAATATTAAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATTTGGCTTGAAAATAATAAAACCCCATCAATATTAAGCAA  50

seq1  ACTGTGTTAATTTCTTTATCATTAATTGCATTGATTTCTGTTTTTATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTTAATTTCTTTATCATTAATTGCATTGATTTCTGTTTTTATAAA  100

seq1  CATAATTTAAATATGAATATTTTTGAATGCCATAATAATTCATATATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTAAATATGAATATTTTTGAATGCCATAATAATTCATATATGTG  150

seq1  TAAACCTACAAGATTACAAGTCACCATTTTTATTTCATTGGTGAATGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTACAAGATTACAAGTCACCATTTTTATTTCATTGGTGAATGCTT  200

seq1  TCACTGGCTCAGTCTTAATAGGATGAGAGTGATATAGAGAAAAGTAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGCTCAGTCTTAATAGGATGAGAGTGATATAGAGAAAAGTAATGA  250

seq1  GCCTTCAAACTATAAAGATTGGACAGCTTAATACTTTTAACTTAGACATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCAAACTATAAAGATTGGACAGCTTAATACTTTTAACTTAGACATC  300

seq1  ATCTGTTATGGAAGATAATATATATAGTGCCAATATGATATGAGATTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTATGGAAGATAATATATATAGTGCCAATATGATATGAGATTATG  350

seq1  GCCCAGAAAGGCAGAGAAAGAGAAGTTGAGGTTGTCTTAGAGGTTCTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAAAGGCAGAGAAAGAGAAGTTGAGGTTGTCTTAGAGGTTCTGTC  400

seq1  CTCAGCACCCTATGAAGACAACTGTGTTTAACATCCAAGAAGAGAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCACCCTATGAAGACAACTGTGTTTAACATCCAAGAAGAGAAAAAG  450

seq1  ATTCAAAAGATATTTTTCTCTCATGTGACCAACACTGGTAACTGTAACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAAGATATTTTTCTCTCATGTGACCAACACTGGTAACTGTAACTA  500

seq1  TTCTGAAGGTTTGGGACATAAGAAAGTAATCACAAAAGGGGAGGGAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGGTTTGGGACATAAGAAAGTAATCACAAAAGGGGAGGGAGGGA  550

seq1  GGGACATGGGAGGGAAAGT  569
      |||||||||||||||||||
seq2  GGGACATGGGAGGGAAAGT  569


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