BAC Information

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BAC

Clone NameB6Ng01-313L03
Chromosome3 (Build37)
Map Location 118,902,191 - 118,903,303
singlet/doubletsinglet
Overlap geneDpyd
Upstream genenone
Downstream geneLOC100043275, LOC100043278, Ptbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313L03.bB6Ng01-313L03.g
ACCGA104833GA104834
length1,0231,101
definitionB6Ng01-313L03.b B6Ng01-313L03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccgggtgcagaagtctctagatggtccatccttttgtctcacct
ccaaactttgtctctgtaactccttccatgggtgttttgttcccaattct
acgaaggggcgaagtgtccacacttaatgttttaaatgatatctttaatg
cctgaaattctgttttttgtttgtttgtttgtttgttttgttttgtttaa
tcacttatattctcttggttaggcttgcctctatttgagttcctgaattt
tcctaattccaattttccctaaggttttgtttgtttgtttattattttac
tttattttattttacttccaatttcaggtctggactgtttatatttattt
ccttacactatttgtttgcatttttatacatttctataagggatttctta
atttcctattcaagaaaatctttcatatacatagaggctattttaaggta
tttgcgttgtgctttgggtattttgcacttctcagggacttctgtggtag
gattcctgaaatctaatggattatcctggctgttcttgattgtgttttta
cagtgatatcaggtatcttggtttagaaagattgtatttctagatactga
tacccgctcttgtgtctttattgtttgtgtgttttgtttcttggtctcat
ggtttcttaccctctttggttcttaggaagatgcaattactttaggtaaa
ttttctgggatcctgctaggtgtggccacagggaattcccaataaaatat
attcctaggtattaggcacagctacttaagaatgggaatggtctgaggat
tatgagtgagtccataggagggagaaaagcagtcttctaccaagacctgc
ttaatctcctggaatggagaaagagaacaaggaaaggtcacagcaagaaa
aaacagaaaatgagcctgcagaatttgatgtggcagagagaggagagagt
aaaggtcagatttgcctacctgtttgctggttactttcttctctgactgg
gatgtttctagggaacactgctg
gaattctctcttctaattgattccttgttgcatgattcatcaacacattg
tttcctaaattttatcattacctattaaattattttaaacatttcagtgt
taaaacttttgcttttattgatgaggatggttacaatagatagtttaaat
ttcatgacggatagtaggcgtgtttttctaaggcttttatgcatcggtaa
tcatgtgattgatacatttaaaaaaattcaaccctttaatgactacttcc
taataaaaaataccaacactgtattttatgatgtaattgtgctatgtaat
ataaggtcttaaagtgatctgccaaaatcagtagtatcttgtatgtttga
aaaatgttacttaaagaaaaggataactaaaacttttgagtttccaatct
attgtatgttttactgtctttccagctttacacaaatagttactggcaca
ccatcataataaacttaagtttgcgatgaagtaagcttacactgcatttg
tatttatgaagtatccagtgacagtatgggctccgctaagttatatcaac
cctatagtttggcctaagtaactatctttaaaaccagtgtaagttctata
ttcaaagtgaagttaatattcaaagtcttggactggttagatggctcaga
atagggaaaggcatgtgccacaaaacttgggtgcctgagtgcaatctctg
agtcctatatggtgaaagagaacagactttttcaagttgttctctactct
tcatgtatgcactatggcatgattgttcctatacacacacacacacacac
acacacatacacccctagctccttgggtgttaatacatgaattagctatg
gatatagcaagatttctacctatattttagaaataagaacattacttgat
aacaacttaagagtattttttctatactatccagagaaagtggagaacaa
ttactgtttacatcattaattcttcttacacttattatttatggcacatt
taggcaggcttgatgctactgcacacatgtgtgatctctttttctacatg
tgggttctgggcaaatgcattttctctatgtgctctcatttacttatgtc
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118902191_118903303
seq2: B6Ng01-313L03.g_65_1165 (reverse)

seq1  TGACATAAGTAAATGAGAAGGCACATAGAGAAAAAGGCATTTGCCCAGAA  50
      ||||||||||||||||||  |||||||||| |||| ||||||||||||||
seq2  TGACATAAGTAAATGAGA--GCACATAGAG-AAAATGCATTTGCCCAGAA  47

seq1  CCCACATGGTAG-AAAAGAGATTCCACACATGTGTGCAGTAGCATTCAAG  99
      ||||||| |||| |||||||||  |||||||||||||||||||| |||||
seq2  CCCACAT-GTAGAAAAAGAGAT--CACACATGTGTGCAGTAGCA-TCAAG  93

seq1  CCCTGGCCCTAAATGTGCCATAAATAAATAAGTGTAAGAAGAATTAATTG  149
       ||||  |||||||||||||||||| ||||||||||||||||||||| ||
seq2  -CCTG--CCTAAATGTGCCATAAAT-AATAAGTGTAAGAAGAATTAA-TG  138

seq1  ATTGTAAACAGTAATTGTTCTCCACCTTTCTCTGGATAGTATAG-AAAAA  198
      | |||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  A-TGTAAACAGTAATTGTTCTCCA-CTTTCTCTGGATAGTATAGAAAAAA  186

seq1  TACTCTTAAGTTGTTATCAAGTAATGTTCTTATTTCTAAAATATAGGTAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTAAGTTGTTATCAAGTAATGTTCTTATTTCTAAAATATAGGTAG  236

seq1  AAATCTTGCTATATCCATAGCTAATTCATGTATTAACACCCAAGGAGCTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGCTATATCCATAGCTAATTCATGTATTAACACCCAAGGAGCTA  286

seq1  GGGGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAGGAACAATCATGCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAGGAACAATCATGCC  336

seq1  ATAGTGCATACATGAAGAGTAGAGAACAACTTGAAAAAGTCTGTTCTCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGCATACATGAAGAGTAGAGAACAACTTGAAAAAGTCTGTTCTCTT  386

seq1  TCACCATATAGGACTCAGAGATTGCACTCAGGCACCCAAGTTTTGTGGCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATATAGGACTCAGAGATTGCACTCAGGCACCCAAGTTTTGTGGCA  436

seq1  CATGCCTTTCCCTATTCTGAGCCATCTAACCAGTCCAAGACTTTGAATAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTTCCCTATTCTGAGCCATCTAACCAGTCCAAGACTTTGAATAT  486

seq1  TAACTTCACTTTGAATATAGAACTTACACTGGTTTTAAAGATAGTTACTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCACTTTGAATATAGAACTTACACTGGTTTTAAAGATAGTTACTT  536

seq1  AGGCCAAACTATAGGGTTGATATAACTTAGCGGAGCCCATACTGTCACTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAAACTATAGGGTTGATATAACTTAGCGGAGCCCATACTGTCACTG  586

seq1  GATACTTCATAAATACAAATGCAGTGTAAGCTTACTTCATCGCAAACTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTCATAAATACAAATGCAGTGTAAGCTTACTTCATCGCAAACTTA  636

seq1  AGTTTATTATGATGGTGTGCCAGTAACTATTTGTGTAAAGCTGGAAAGAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATTATGATGGTGTGCCAGTAACTATTTGTGTAAAGCTGGAAAGAC  686

seq1  AGTAAAACATACAATAGATTGGAAACTCAAAAGTTTTAGTTATCCTTTTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAACATACAATAGATTGGAAACTCAAAAGTTTTAGTTATCCTTTTC  736

seq1  TTTAAGTAACATTTTTCAAACATACAAGATACTACTGATTTTGGCAGATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTAACATTTTTCAAACATACAAGATACTACTGATTTTGGCAGATC  786

seq1  ACTTTAAGACCTTATATTACATAGCACAATTACATCATAAAATACAGTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAGACCTTATATTACATAGCACAATTACATCATAAAATACAGTGT  836

seq1  TGGTATTTTTTATTAGGAAGTAGTCATTAAAGGGTTGAATTTTTTTAAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTTTTATTAGGAAGTAGTCATTAAAGGGTTGAATTTTTTTAAAT  886

seq1  GTATCAATCACATGATTACCGATGCATAAAAGCCTTAGAAAAACACGCCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAATCACATGATTACCGATGCATAAAAGCCTTAGAAAAACACGCCT  936

seq1  ACTATCCGTCATGAAATTTAAACTATCTATTGTAACCATCCTCATCAATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCCGTCATGAAATTTAAACTATCTATTGTAACCATCCTCATCAATA  986

seq1  AAAGCAAAAGTTTTAACACTGAAATGTTTAAAATAATTTAATAGGTAATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAAGTTTTAACACTGAAATGTTTAAAATAATTTAATAGGTAATG  1036

seq1  ATAAAATTTAGGAAACAATGTGTTGATGAATCATGCAACAAGGAATCAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTTAGGAAACAATGTGTTGATGAATCATGCAACAAGGAATCAAT  1086

seq1  TAGAAGAGAGAATTC  1113
      |||||||||||||||
seq2  TAGAAGAGAGAATTC  1101