BAC Information

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BAC

Clone NameB6Ng01-314D03
Chromosome3 (Build37)
Map Location 9,241,809 - 9,242,900
singlet/doubletsinglet
Overlap geneZbtb10
Upstream geneLOC545500, LOC620966, Stmn2, Hey1, LOC100039504, Mrps28, Tpd52, LOC100041389, LOC667886
Downstream geneZfp704, Pag1, LOC621504, Fabp5, LOC100041480, Pmp2, Fabp9, Fabp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314D03.bB6Ng01-314D03.g
ACCGA105203GA105204
length1,1501,090
definitionB6Ng01-314D03.b B6Ng01-314D03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacagcaattttggcattgagtaacaatttctctagcttcttttc
tagttaatgctaagtggcagcgtaaagtttcagccgtcacatgaaagcgc
ttgtgaaattcttttgcagctcctgcctgggaagacagagcaacggccac
aatcttagtggctttattcgccaaatcatttcctagagacataggaccaa
ggaggcccgaatgcgctctgacatgggtgatgtaaacggggaaccttcta
tttaataaggcaaactgtatttgttgaaaaatgttggtgactctattgga
gggttttattaccccagctgtctcaagaagattaactgcattaactacat
aggaagaatcagacacaatattaagcggtccttggaaggcctcaagaacc
tccagtaccactaaacattccacaccttgaggtgaggtttcattatattg
cttagatactaccttaccattaaccacataagcacctataccagtttttg
atccatcaatgtacactacaatcccatctgtgagtggattcttggctgtt
acttgcggaaacactatagcctgactcagggcaaactgtaagattggatg
ctttgggtaatgattgtcaatctgtcctgaaaaggaggtgactaaaattg
cccaataattagatgtagctgccaaggtctgaacttgtacagaggtatat
ggtacaatcaaaagataaggttctcttccaaaataaataatagctgcttt
taaccctcaaagtgcaagttgtgcaactgcattagggtaccagtctatta
ttttagtgggagatgcatttggatgaacccataataagggcccattttgc
cacaaaactgctgtcggcaattgggctgtcttaaagacacacaagtcaaa
aggctgtgactcatcaatgcgttgcaattgagcctcctgcaaggcatttt
ctacaatttgtaaagcctgaccagcagcgggggtaagtgccctgggggga
ggagatgtgagggtctccttcagatatcaataacgcttatctgcagatga
ggattttcaaaattgtctcacattataatcccttatagttctgaaaatca
ttagatgagacatcctgcgatttctacattctgcgaggaaacaatcctct

gaattcacagataaggaactgactgtgtatatagatgcacagggctcctc
tgttgtcttgaaacagggtcatccccagttggccatctttctgcctcact
tcccaaaggctgcgattactaatatgtgctaccatgtctggctcttttaa
aaaaacatttcgatatgtgagccacgggaaataatgaaagtcttgtgagg
tttaacgcatgaggagttgagggttctgtgggtgggatgtaggatcacgc
gtgcatcttgaagagattactagcttctgcagagagcgggttaaaaggcc
tggcttagaagagaacattgtgatgtttccttgaaagtgtgcaagctaac
gcaagcattcgcaagatgagtaaagctttcagggaggaagaggtctcgca
gaagagagacactattgctctgtagttttgcctttttatgtgtccttgta
aaggggacagggtagagctggttcctaactactggagaaagggaagacac
agtacctttcccctaaaaagtccttgggaaaattattgattactggggta
actgttaacctcctctcccaaagtgaacgcattcagctgtaacatagccc
catggcagagcatttgtctggttcactctgttcaacctgtcccagcccaa
agtatctatctctgtctatccatccttccatacactagactacagaaaac
tcaacttctaaattggcttatgcctggaatcccaccaccacttgggaagc
tgaggcaggtggactgctgagagttaaaaagtcaatcaaggttatagatt
aagactataaacaaaatgccgcatgaataaaaaaaaccaaatgaatatga
aagacaaaaccaaatctgatgttagtgtcatcgtcctggcacatggggac
ctaaaggcaggaggataaatatctttgttgtgttttggtttttccagaca
ggtttctctgtgtagcctttggccatccctagaactcactctgttaacag
gctggcctcgaactcagaaattcactgccttctgcctccggtgtgctggg
gtaatggcgtgcgcccaccacaccgactgagataaatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_9241809_9242900
seq2: B6Ng01-314D03.g_66_1155

seq1  GAATTCACAGATAAGGAACTGACTGTGTATATAGATGCACAGGGCTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGATAAGGAACTGACTGTGTATATAGATGCACAGGGCTCCTC  50

seq1  TGTTGTCTTGAAACAGGGTCATCCCCAGTTGGCCATCTTTCTGCCTCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCTTGAAACAGGGTCATCCCCAGTTGGCCATCTTTCTGCCTCACT  100

seq1  TCCCAAAGGCTGCGATTACTAATATGTGCTACCATGTCTGGCTCTTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAGGCTGCGATTACTAATATGTGCTACCATGTCTGGCTCTTTTAA  150

seq1  AAAAACATTTCGATATGTGAGCCACGGGAAATAATGAAAGTCTTGTGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATTTCGATATGTGAGCCACGGGAAATAATGAAAGTCTTGTGAGG  200

seq1  TTTAACGCATGAGGAGTTGAGGGTTCTGTGGGTGGGATGTAGGATCACGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACGCATGAGGAGTTGAGGGTTCTGTGGGTGGGATGTAGGATCACGC  250

seq1  GTGCATCTTGAAGAGATTACTAGCTTCTGCAGAGAGCGGGTTAAAAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCTTGAAGAGATTACTAGCTTCTGCAGAGAGCGGGTTAAAAGGCC  300

seq1  TGGCTTAGAAGAGAACATTGTGATGTTTCCTTGAAAGTGTGCAAGCTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAGAAGAGAACATTGTGATGTTTCCTTGAAAGTGTGCAAGCTAAC  350

seq1  GCAAGCATTCGCAAGATGAGTAAAGCTTTCAGGGAGGAAGAGGTCTCGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCATTCGCAAGATGAGTAAAGCTTTCAGGGAGGAAGAGGTCTCGCA  400

seq1  GAAGAGAGACACTATTGCTCTGTAGTTTTGCCTTTTTATGTGTCCTTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAGACACTATTGCTCTGTAGTTTTGCCTTTTTATGTGTCCTTGTA  450

seq1  AAGGGGACAGGGTAGAGCTGGTTCCTAACTACTGGAGAAAGGGAAGACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGACAGGGTAGAGCTGGTTCCTAACTACTGGAGAAAGGGAAGACAC  500

seq1  AGTACCTTTCCCCTAAAAAGTCCTTGGGAAAATTATTGATTACTGGGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTTTCCCCTAAAAAGTCCTTGGGAAAATTATTGATTACTGGGGTA  550

seq1  ACTGTTAACCTCCTCTCCCAAAGTGAACGCATTCAGCTGTAACATAGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAACCTCCTCTCCCAAAGTGAACGCATTCAGCTGTAACATAGCCC  600

seq1  CATGGCAGAGCATTTGTCTGGTTCACTCTGTTCAACCTGTCCCAGCCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAGAGCATTTGTCTGGTTCACTCTGTTCAACCTGTCCCAGCCCAA  650

seq1  AGTATCTATCTCTGTCTATCCATCCTTCCATACACTAGACTACAGAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTATCTCTGTCTATCCATCCTTCCATACACTAGACTACAGAAAAC  700

seq1  TCAACTTCTAAATTGGCTTATGCCTGGAATCCCACCACCACTTGGGAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTCTAAATTGGCTTATGCCTGGAATCCCACCACCACTTGGGAAGC  750

seq1  TGAGGCAGGTGGACTGCTGAGAGTTAAAAAGTCAATCAAGGTTATAGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGGTGGACTGCTGAGAGTTAAAAAGTCAATCAAGGTTATAGATT  800

seq1  AAGACTATAAACAAAATGCCGCATGAATAAAAAAAACCAAATGAATATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTATAAACAAAATGCCGCATGAATAAAAAAAACCAAATGAATATGA  850

seq1  AAGACAAAACCAAATCTGATGTTAGTGTCATCGTCCTGGCACATGGGGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAACCAAATCTGATGTTAGTGTCATCGTCCTGGCACATGGGGAC  900

seq1  CT-AAGGCAGGAGGATAAATATCTTTGTTTGTGTTTTGGTTTTTCCAGAC  949
      || |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTAAAGGCAGGAGGATAAATATCTTTG-TTGTGTTTTGGTTTTTCCAGAC  949

seq1  AGGGTTTCTCTGTGTAGCC-TTGGCCAT-CCTAGAACTCACTCTGTAAAC  997
      | ||||||||||||||||| |||||||| ||||||||||||||||| || 
seq2  A-GGTTTCTCTGTGTAGCCTTTGGCCATCCCTAGAACTCACTCTGTTAA-  997

seq1  CAGGCTGGCCTCGAACTCAGAAATTCACCTGCC-TCTGCCTCCCGTGTGC  1046
      ||||||||||||||||||||||||||| ||||| ||||||||| ||||||
seq2  CAGGCTGGCCTCGAACTCAGAAATTCA-CTGCCTTCTGCCTCCGGTGTGC  1046

seq1  TGGGGTTAAAGGCGTGCG-CCACCACACCCGGCTGAGGATAAATATC  1092
      ||||| ||| |||||||| |||||||| ||| |||| ||||||||||
seq2  TGGGG-TAATGGCGTGCGCCCACCACA-CCGACTGA-GATAAATATC  1090