BAC Information

Click to search

BAC

Clone NameB6Ng01-314E24
Chromosome7 (Build37)3 (Build37)
Map Location 32,891,054 - 32,892,02391,443,744 - 91,444,556
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneHpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355
Downstream geneLOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314E24.bB6Ng01-314E24.g
ACCGA105282GA105283
length971918
definitionB6Ng01-314E24.b B6Ng01-314E24.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(32,891,054 - 32,892,023)(91,443,744 - 91,444,556)
sequence
gaattctggggacatttgagaggctgtataattgctatggtcctgagaag
ggtggttgattgttgttggtcatggtcttttaagtagtcaggtgtaaaat
agaaatagtaagaagaaattatatatcctgacaagaaagttcaatgtttc
ctcatgaggtcattgcccaaattatcaagaagtagtctaatgataatatt
gccacctttctgaccgctgattttattctgggatctatttcctttcccct
ccatgttgttttcaaaacaaaccaaaaaagaaaaaaaataaacgaacaaa
aaatctctcatctagtgttaggagtttgaaatggtggaagaaagaggatg
agggaacgtggaagaaagaagaacccacaaagtagctaacaaaaggtaca
gtggattcttatcacacaccaatagccccatctcctaatactgccccgtt
agaggtgactatgtgtggaaagtttcaaggagcatgaaactttgaagcca
cagctgtcccactgtagcttcttataagcctaactacattcctacctttc
agccacatcctacaagatcattatttttcttgactcttttggaagttgcc
ttggaagggtcagatatttttccatagacaacatcctgtgccagagagaa
tcctttgctggagctctgcttctgttcctgggtaagatttagcactatgc
atcctcctccagctttacaaaaggagccatgatactgatctataaaagtt
ggtcagcatactcaggaagctgaagaaaacgacaaatgtcacccgtatat
tgtggatatagagatgagttgttccagaattccctgtattattgggtgat
atatatatgtctaatatatatatatatatatacatatataatttaactct
tattatttgggaatcatatattatattataaaatacattataatatatta
ttattacaatgtatttaacat
gaattcagaactcttcagctgaggaacggtggtactggtaagtagaaaga
aattaatgtgagtctttgagaagcatgctctcctaagaaataggttcttg
gtaaagagaaaaataggatctccggctctggagacaagaaagtgaaagta
agagagaaagtgaaagtaagaggaaagtgaaagtaagaggataataggga
cagtctatgggttactttctttttctagccattggagtaatttttctgag
tcttttttgtggttgtggcgactgtgtggaacatgaaagactaggtatgg
ggtcgtcacagtcacacccctattttcgttgtaaagaagaagtcaggtaa
atggagattgttacatgatctaagagccattaatgcacaaatgcaagtta
tgggtcctgtacaaacaggactccccctactctctgctctacctaaggat
tggagaattatagtagtagatattaaggattgtttcttttccattccatt
aaataagaaagataaacctagatttgcattcaccttgccttctattaatc
atatggagcctgataaaaggtaccaatggcgggtattacctcaaggaatg
gcaaatagccctaccatatgtcagttatatgtaggaaaagccttgcaacc
agttagggatggtttcccctccttaaaaatttgtcattatatggacgata
ttgtgatttgtggacctgaagaagaaagtatacagcaagcttatggcttg
cttaatgaaactttaaaaaaataatggcttgattattgcaccagaaaaag
tacagcagtatgacgttagtcattttttaggagccactattactttacga
tgtgtcaccccacaaagattagcattagaaaagatcatctaaagacacta
aatgcttttcaaaaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32891054_32892023
seq2: B6Ng01-314E24.b_47_1017

seq1  GAATTCTGGGGACATTTGAGAGGCTGTATAATTGCTATGGTCCTGAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGGACATTTGAGAGGCTGTATAATTGCTATGGTCCTGAGAAG  50

seq1  GGTGGTTGATTGTTGTTGGTCATGGTCTTTTAAGTAGTCAGGTGTAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTGATTGTTGTTGGTCATGGTCTTTTAAGTAGTCAGGTGTAAAAT  100

seq1  AGAAATAGTAAGAAGAAATTATATATCCTGACAAGAAAGTTCAATGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGTAAGAAGAAATTATATATCCTGACAAGAAAGTTCAATGTTTC  150

seq1  CTCATGAGGTCATTGCCCAAATTATCAAGAAGTAGTCTAATGATAATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAGGTCATTGCCCAAATTATCAAGAAGTAGTCTAATGATAATATT  200

seq1  GCCACCTTTCTGACCGCTGATTTTATTCTGGGATCTATTTCCTTTCCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTTTCTGACCGCTGATTTTATTCTGGGATCTATTTCCTTTCCCCT  250

seq1  CCATGTTGTTTTCAAAACAAACCAAAAAAGAAAAAAAATAAACGAACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTGTTTTCAAAACAAACCAAAAAAGAAAAAAAATAAACGAACAAA  300

seq1  AAATCTCTCATCTAGTGTTAGGAGTTTGAAATGGTGGAAGAAAGAGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTCATCTAGTGTTAGGAGTTTGAAATGGTGGAAGAAAGAGGATG  350

seq1  AGGGAACGTGGAAGAAAGAAGAACCCACAAAGTAGCTAACAAAAGGTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACGTGGAAGAAAGAAGAACCCACAAAGTAGCTAACAAAAGGTACA  400

seq1  GTGGATTCTTATCACACACCAATAGCCCCATCTCCTAATACTGCCCCGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTCTTATCACACACCAATAGCCCCATCTCCTAATACTGCCCCGTT  450

seq1  AGAGGTGACTATGTGTGGAAAGTTTCAAGGAGCATGAAACTTTGAAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGACTATGTGTGGAAAGTTTCAAGGAGCATGAAACTTTGAAGCCA  500

seq1  CAGCTGTCCCACTGTAGCTTCTTATAAGCCTAACTACATTCCTACCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTCCCACTGTAGCTTCTTATAAGCCTAACTACATTCCTACCTTTC  550

seq1  AGCCACATCCTACAAGATCATTATTTTTCTTGACTCTTTTGGAAGTTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACATCCTACAAGATCATTATTTTTCTTGACTCTTTTGGAAGTTGCC  600

seq1  TTGGAAGGGTCAGATATTTTTCCATAGACAACATCCTGTGCCAGAGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGGTCAGATATTTTTCCATAGACAACATCCTGTGCCAGAGAGAA  650

seq1  TCCTTTGCTGGAGCTCTGCTTCTGTTCCTGGGTAAGATTTAGCACTATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGCTGGAGCTCTGCTTCTGTTCCTGGGTAAGATTTAGCACTATGC  700

seq1  ATCCTCCTCCAGCTTTACAAAAGGAGCCATGATACTGATCTATAAAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCTCCAGCTTTACAAAAGGAGCCATGATACTGATCTATAAAAGTT  750

seq1  GGTCAGCATACTCAGGAAGCTGAAGAAAACGACAAATGTCACCCGTATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCATACTCAGGAAGCTGAAGAAAACGACAAATGTCACCCGTATAT  800

seq1  TGTGGATATAGAGATGAGTTGTTCCAGAATTCCCTGTATTATTGGGTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATATAGAGATGAGTTGTTCCAGAATTCCCTGTATTATTGGGTGAT  850

seq1  ATATATATGTCTAATATATATATATATATATACATATATAATTTAACTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATGTCTAATATATATATATATATATACATATATAATTTAACTCT  900

seq1  TATTATTT-GGAATCAATATATTATATTATAAAATACATTATAATATA-T  948
      |||||||| |||||| |||||||||||||||||||||||||||||||| |
seq2  TATTATTTGGGAATC-ATATATTATATTATAAAATACATTATAATATATT  949

seq1  AATATTACAATGTATTTAATAT  970
      | ||||||||||||||||| ||
seq2  ATTATTACAATGTATTTAACAT  971

seq1: chr3_91443744_91444556
seq2: B6Ng01-314E24.g_67_799

seq1  GAATTCAGAACTCTTCAGCTGAGGAACGGCGGTACCGGTAAGTAAAAAGA  50
      ||||||||||||||||||||||||||||| ||||| |||||||| |||||
seq2  GAATTCAGAACTCTTCAGCTGAGGAACGGTGGTACTGGTAAGTAGAAAGA  50

seq1  AATTAATGTGAGTCTCTGAGAAGCATGCTCTCCTAAGAAATAGGATCTCG  100
      ||||||||||||||| |||||||||||||||||||||||||||| ||| |
seq2  AATTAATGTGAGTCTTTGAGAAGCATGCTCTCCTAAGAAATAGGTTCTTG  100

seq1  GTAAAGAGAAAAATAGGATCTCCGGCTCTGGAGACAAGAAAGTGAAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAGAAAAATAGGATCTCCGGCTCTGGAGACAAGAAAGTGAAAGTA  150

seq1  AGAGAGAAAGTGAAAGTAAGAGGAAAGTGAAAGTAAGAGGATAATAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAAGTGAAAGTAAGAGGAAAGTGAAAGTAAGAGGATAATAGGGA  200

seq1  CAGTCTATGGGTTACTTTCTTTTTCTAGCCATTGGAGTAATTTTTCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTATGGGTTACTTTCTTTTTCTAGCCATTGGAGTAATTTTTCTGAG  250

seq1  TCTTTTTTGTTGTTGTGGTGACTGTGTGGAACATGAAAGACGAGGTATGG  300
      |||||||||| ||||||| |||||||||||||||||||||| ||||||||
seq2  TCTTTTTTGTGGTTGTGGCGACTGTGTGGAACATGAAAGACTAGGTATGG  300

seq1  GGTCGTCACAGTCACACCCAATTTTTTCAGCGCTCGATGAGCTGCTAAGT  350
      |||||||||||||||||||                               
seq2  GGTCGTCACAGTCACACCC-------------------------------  319

seq1  GCAAAGGGCGCAAAACTATATCTTTTGGGTCATATTCAACCTTCTGTATC  400
                     ||||                               
seq2  ---------------CTAT-------------------------------  323

seq1  TCCATGGAATACCCAAAATTTTGTTATCAGAAAGAAATCGGGCAAATGGA  450
                        ||| ||| | |  ||||| || || |||||||
seq2  ------------------TTTCGTTGTAAAGAAGAAGTCAGGTAAATGGA  355

seq1  GGTTGTTACAGGATCTGCAAGCTATTAATGCACAGATGCAGGTGATGGGC  500
      | |||||||| |||||   ||| ||||||||||| ||||| || ||||| 
seq2  GATTGTTACATGATCTAAGAGCCATTAATGCACAAATGCAAGTTATGGGT  405

seq1  TCCATTCAGAGGGGTCTGTCTCTCTTATCTGCTCTGCC----------AG  540
       |  | || |  || ||  | ||  | |||||||| ||          ||
seq2  CCTGTACAAACAGGACTCCCCCTACTCTCTGCTCTACCTAAGGATTGGAG  455

seq1  A---AAAGTGG--CCTCTAAAAGATTGTTTCTTTTCCATTCCATTAAATA  585
      |   | ||| |    | | || ||||||||||||||||||||||||||||
seq2  AATTATAGTAGTAGATATTAAGGATTGTTTCTTTTCCATTCCATTAAATA  505

seq1  AGAAAGATAAACCTAGATTTGCATTCACCTTGCCTTCTATTAATCATATG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATAAACCTAGATTTGCATTCACCTTGCCTTCTATTAATCATATG  555

seq1  GAGCCTGATAAAAGGTACCAATGGCAGGTATTACCTCAAGGAATGGCAAA  685
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAGCCTGATAAAAGGTACCAATGGCGGGTATTACCTCAAGGAATGGCAAA  605

seq1  TAGCCCTACCATATGTCAGTTATATGTAGGAAAAGCCTTGTAACCAGTTA  735
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAGCCCTACCATATGTCAGTTATATGTAGGAAAAGCCTTGCAACCAGTTA  655

seq1  GGGATGGTTTCCCCTCCTTAAAAATTTGTCATTATATGGACGATATTGTG  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGTTTCCCCTCCTTAAAAATTTGTCATTATATGGACGATATTGTG  705

seq1  ATTTGTGGACCTGAAGAAGAAAGTATAC  813
      ||||||||||||||||||||||||||||
seq2  ATTTGTGGACCTGAAGAAGAAAGTATAC  733