BAC Information

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BAC

Clone NameB6Ng01-315A19
Chromosome3 (Build37)
Map Location 65,773,440 - 65,774,386
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866, Ccnl1
Downstream geneLOC625048, Veph1, Tpi-rs2, Ptx3, LOC625115
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315A19.bB6Ng01-315A19.g
ACCGA105803GA105804
length1,180951
definitionB6Ng01-315A19.b B6Ng01-315A19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatgactaagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgaaagtcaaaacaaccctgagat
tctacctcacaccagttagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttgtgg
gattgcaagctggtacaaccactctgaaaatcagtctggtagttcctcag
aaaattggacatagcactactggaagatccagcaatacctctcctgggca
tatatccagaagatgccccaacttgtaataaggacacatgctccactatg
ttcataacagccttatttataatagctagaagctggaaagaacccagacg
tccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaactatgaatttatgaaattcttaggcaaa
tggatggatatggaggatgtcattctgggtgaggtaacccaatcacaaaa
gaacacacatgatatgtactcactgataagtggagaatacaatttacaaa
acacatgaaactcaagaagaaggaagaccaaagtgtggatacttcatcct
ttcttagaatggggaacataatacccatggaaggagttacagagacaaag
tttggggttgagatggaaagaaggaccatccagagactgccccacccaag
gatccatccctaaacaaccaccaaacccagacactattgcacatgccagc
aagattttgctgacaggaccctcatatagctgtctcttatgaggctatac
cagtgcctggcaaatacagaagtggatgttcactatgttcatctattaga
tggaacacggggcccccaatgaaggagctagagaaagtacgcaaggagct
gtggttctgcaccctataggtagaacacagtatgaactaaccagtacccc
accccaccccccgagtttgtgtctctagtgaatatgtagcagagatggcc
tagtcgctatcgtgggaggaaaggccttggatcttgcaagaattatatgc
ccagtaaacggtatgcaggtcaggaacaggtggttgagaatagtaacttc
cgatgaccatttgaagttcatgtagcgaga
gaattcaaggagggcaggaacctggaggcaggaactgatgcaaaggccat
caagaagagccgcttactggctcactcctcatggcttgctcagtctgctt
ccttacagaacccaggaccaccggctcaggaatggcaccacccacgatgg
gttgggccctctcccatcaatcactaattaagaaaatgccttacaggttt
acctacagctagatctatggagacaccctctcaactgagggtccctcctc
tcagataactatagtttgtgtcaagttgacataaaactagccagcagtgt
gggtcatagacattcatatttggctcagaataaactatctcttaacaact
tttgagtttggagttgtgttttgccctaacaatgtcatgtcgaccgaata
tttctgtttaggctaatgatacttaaggtttgcatttctatctcgaagtt
tattgaccacataccccaagactaatcaatcagcgtcacagcatagaccc
aggagctaagactggacctcaaaaatttctcaggactagcttatatagga
aatagcagcagcggcagcagcggcggcggcggcggcaacaacagcaaaac
agaacaacacacaatgagctcatgtgtaggtgcaggaagtgctgcccagt
ggtcagctctaactcaagatattttgactacctagacagaacagggtttt
tttgtttgtttttgttttgttttttgtttttgttttgagacagggtttct
ctgtgtagccctggctgtcttgaaactcactctgtagaccaggatggcct
agaacttagagatctgcctgcctctgcttccaaagtgctgggattaaagg
catgtgccaccactgcccgacaacagacagttttaactgatatttattct
gcttggtcctaaacagaacttatggttgcggatttcttaaaattaacaac
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_65773440_65774386
seq2: B6Ng01-315A19.g_67_1011

seq1  GAATTCAAGGAGGGCAGGAACCTGGAGGCAGGAACTGATGCAAAGGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGAGGGCAGGAACCTGGAGGCAGGAACTGATGCAAAGGCCAT  50

seq1  CAAGAAGAGCCGCTTACTGGCTCACTCCTCATGGCTTGCTCAGTCTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGAGCCGCTTACTGGCTCACTCCTCATGGCTTGCTCAGTCTGCTT  100

seq1  CCTTACAGAACCCAGGACCACCGGCTCAGGAATGGCACCACCCACGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACAGAACCCAGGACCACCGGCTCAGGAATGGCACCACCCACGATGG  150

seq1  GTTGGGCCCTCTCCCATCAATCACTAATTAAGAAAATGCCTTACAGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGCCCTCTCCCATCAATCACTAATTAAGAAAATGCCTTACAGGTTT  200

seq1  ACCTACAGCTAGATCTATGGAGACACCCTCTCAACTGAGGGTCCCTCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAGCTAGATCTATGGAGACACCCTCTCAACTGAGGGTCCCTCCTC  250

seq1  TCAGATAACTATAGTTTGTGTCAAGTTGACATAAAACTAGCCAGCAGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAACTATAGTTTGTGTCAAGTTGACATAAAACTAGCCAGCAGTGT  300

seq1  GGGTCATAGACATTCATATTTGGCTCAGAATAAACTATCTCTTAACAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATAGACATTCATATTTGGCTCAGAATAAACTATCTCTTAACAACT  350

seq1  TTTGAGTTTGGAGTTGTGTTTTGCCCTAACAATGTCATGTCGACCGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTTTGGAGTTGTGTTTTGCCCTAACAATGTCATGTCGACCGAATA  400

seq1  TTTCTGTTTAGGCTAATGATACTTAAGGTTTGCATTTCTATCTCGAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTAGGCTAATGATACTTAAGGTTTGCATTTCTATCTCGAAGTT  450

seq1  TATTGACCACATACCCCAAGACTAATCAATCAGCGTCACAGCATAGACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACCACATACCCCAAGACTAATCAATCAGCGTCACAGCATAGACCC  500

seq1  AGGAGCTAAGACTGGACCTCAAAAATTTCTCAGGACTAGCTTATATAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTAAGACTGGACCTCAAAAATTTCTCAGGACTAGCTTATATAGGA  550

seq1  AATAGCAGCAGCGGCAGCAGCGGCGGCGGCGGCGGCAACAACAGCAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCAGCAGCGGCAGCAGCGGCGGCGGCGGCGGCAACAACAGCAAAAC  600

seq1  AGAACAACACACAATGAGCTCATGTGTAGGTGCAGGAAGTGCTGCCCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAACACACAATGAGCTCATGTGTAGGTGCAGGAAGTGCTGCCCAGT  650

seq1  GGTCAGCTCTAACTCAAGATATTTTGACTACCTAGACAGAACAGGGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCTCTAACTCAAGATATTTTGACTACCTAGACAGAACAGGGTTTT  700

seq1  TTTGTTTGTTTTTGTTTTGTTTTTTGTTTTTGTTTTGAGACAGGGTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTTTGTTTTGTTTTTTGTTTTTGTTTTGAGACAGGGTTTCT  750

seq1  CTGTGTAGCCCTGGCTGTCTTGAAACTCACTCTGTAGACCAGGATGGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGCCCTGGCTGTCTTGAAACTCACTCTGTAGACCAGGATGGCCT  800

seq1  AGAACTTAGAGATCTGCCTGCCTCTGCTTCCAAAGTGCTGGGATTAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTAGAGATCTGCCTGCCTCTGCTTCCAAAGTGCTGGGATTAAAGG  850

seq1  CATGTGCCACCACTGCCCGACAACAGAACAGTTTTAACTGATATTTATTC  900
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CATGTGCCACCACTGCCCGACAACAG-ACAGTTTTAACTGATATTTATTC  899

seq1  TGCTTGGTCCTAAACAGAACTTATGGTTGCGGAATTTCTTAAAATTA  947
      |||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGCTTGGTCCTAAACAGAACTTATGGTTGCGG-ATTTCTTAAAATTA  945