BAC Information

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BAC

Clone NameB6Ng01-315D17
Chromosome3 (Build37)
Map Location 17,994,057 - 17,994,506
singlet/doubletsinglet
Overlap geneCyp7b1
Upstream geneLOC100040059, EG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5
Downstream geneLOC622921, LOC100040153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315D17.bB6Ng01-315D17.g
ACCGA105935GA105936
length444720
definitionB6Ng01-315D17.b B6Ng01-315D17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
catagaaactaaatcaactcaaaaatactactcatcctaagtatagacaa
ctactcatattctatataaattttgtgtattaggtccttaagagttctgc
ccctcccccaaagaatattggcatcttgataatgtagggaatattttttt
ctgaacatgtaattcttttgtaattcctttaggaacataagaggtgatgc
aggtttcatagttgactacagtatacgtcacattggatgctgctgcccct
gtgatatgtctcagcctgtccaataggaaccatctctgcaacacttgggg
cagtcctgtagtgctgaggaacagtcaactgtaatcacactgttaggacc
tgatatgtcagaatctgttgagagaagggagtctgtatcttatgtataaa
aactcgaggccaacacaggctaacatactaatcttattaagcca

gaattctttatttagctctgtaccccattttgtaatagggccatttgatt
ttctagagtctaacttcttgagttctttgtacattttgaatattagcact
ctatcagatttaggattcgtaaagatctttttccaatctgttggttacct
ttttaaatacccatggaagcagttacagagacaaagtgtggagcagagac
tgaaggaatgaccatcctgagactgccctacctgaggatccatctcataa
ataaccaacaaatctagacacaattgcagatgccaacaagagcttgctga
caggagcctgatatagtgtctcctgagaggttctgccagtgcctgtcaaa
tacagaagtggatgctcacagccatccattagactgaacacagggtcccc
aatgaaggagctagagaaagtacccaaggagcagaaggggtttgcagtcc
cttaggaggaccaacaacatgaactaaacagtatctccagagctccctgg
gactaaaccaacaaccaaagaaaacacatgatgggatccatggctctagc
tgcgtatgtaacagaggatagcctagtcagtcatcaatgggaggagagga
ccttggtcctgtgaaggttctatgccccagtataagggaatgccagggcc
aggaagtgaaagtggatgggttggtgagcacagggaggtggcaggggata
ggaggggtcttttggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_17994057_17994506
seq2: B6Ng01-315D17.b_46_495

seq1  GAATTCCATAGAAACTAAATCAACTCAAAAATACTACTCATCCTAAGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGAAACTAAATCAACTCAAAAATACTACTCATCCTAAGTAT  50

seq1  AGACAACTACTCATATTCTATATAAATTTTGTGTATTAGGTCCTTAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAACTACTCATATTCTATATAAATTTTGTGTATTAGGTCCTTAAGAG  100

seq1  TTCTGCCCCTCCCCCAAAGAATATTGGCATCTTGATAATGTAGGGAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCCCTCCCCCAAAGAATATTGGCATCTTGATAATGTAGGGAATAT  150

seq1  TTTTTTCTGAACATGTAATTCTTTTGTAATTCCTTTAGGAACATAAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTGAACATGTAATTCTTTTGTAATTCCTTTAGGAACATAAGAGG  200

seq1  TGATGCAGGTTTCATAGTTGACTACAGTATACGTCACATTGGATGCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCAGGTTTCATAGTTGACTACAGTATACGTCACATTGGATGCTGCT  250

seq1  GCCCCTGTGATATGTCTCAGCCTGTCCAATAGGAACCATCTCTGCAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGTGATATGTCTCAGCCTGTCCAATAGGAACCATCTCTGCAACAC  300

seq1  TTGGGGCAGTCCTGTAGTGCTGAGGAACAGTCAACTGTAATCACACTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCAGTCCTGTAGTGCTGAGGAACAGTCAACTGTAATCACACTGTT  350

seq1  AGGACCTGATATGTCAGAATCTGTTGAGAGAAGGGAGTCTGTATCTTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTGATATGTCAGAATCTGTTGAGAGAAGGGAGTCTGTATCTTATG  400

seq1  TATAAAAACTCGAGGCCAACACAGGCTAACATACTAATCTTATTAAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAACTCGAGGCCAACACAGGCTAACATACTAATCTTATTAAGCCA  450


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