BAC Information

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BAC

Clone NameB6Ng01-315P15
Chromosome3 (Build37)
Map Location 157,731,010 - 157,732,154
singlet/doubletsinglet
Overlap geneLrrc40
Upstream geneNegr1, LOC546818, Zranb2, Ptger3, LOC433686, LOC624684, Cth, Ankrd13c, Sfrs11
Downstream geneLrrc7, LOC100041008, LOC668905
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315P15.bB6Ng01-315P15.g
ACCGA106487GA106488
length4371,137
definitionB6Ng01-315P15.b B6Ng01-315P15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgttcagttctgagccccattttttaatggggttatttgattttctga
agtccaccttcttgagttctttatatatgttggatattagtcccctatct
gatttaggataggtaaagatcctttcccaatctgttggtggtctttttgt
cttattgacggtgtcttttgacttgcagaaactttggagtttcattaggt
cccatttgtcgattctcgatcttacagcacaagccattgctgttctgttc
aggaatttttcccctgtgcccatatcttcaaggcttttccccactttctc
ctctataagtttcagtgtctctggttttatgtgaagttccttgatccact
tagatttgaccttagtacaaggagataagtatggatcgattcgcattctt
ctacacgataacaaccagttgtgccagcaccaattgt

gaattcagctcactgacacacatcagaatgtccacatagacagcaaagga
tggacagaaggaacactcacctgccacctgtcatcagctagatgggagat
ttaggaatgaggtcccagttctggttctgagggaagattcctgcggttac
tgcagatctgttacccgggtactgcacttatggtaatgaagccagatccc
atcagagagtatggtcaagagacccaaagctgcgtcaccacttaggaatt
tctcttacgactttttacgaggatgaaatgttaactggcaaatatgacct
caaaatttttatgtgcttgacacataaaacatttacagaataatgaaata
cgttcatctcccacaaattactgagggcaagaaatcatcaatctgatagt
tttgaaagtgaaaaataaatttcatgagtgtttaaaaaaaaatcagtctg
tagtgtgtttgtataattctttacaaacctcttgtaaacccaccattgtc
ttccatcagaattacttttctattcttccatcagaattacttaatgtttc
tttcctgaaaagaatgagactgcagtatgagtttctcatacacagctgac
ggtgaggtgccctttcatggctgtaagtaggaaagaaaattctggttttg
ttataacctgtagtgaccttgcaatgaccttactctttgaagttcaatag
atctacctctggcttcctgccagccctggacagtgccccttccttcatgt
ataaacagttttacattctcaatctgcctttggtccctcacattcactga
gtacaaagagaacttaactggctcttccaacaaaagtgcggtttgcctgt
caattgcctttgtctttactccatcacatcacagtaaaggctcgctcttc
agaggagggaagcaaaggaaatatcaaattgttgggagcagaaatacgaa
ccattccttgcaatctgttgacactgacatcaaaacaaaaagttctagag
tataacagcactcagcagtcctgatctagcagatgtcctctccctggtct
gagacagtgcgtgccctctgagtggtaaaaccagtaatggaaataatatt
tattcatagtacgttaggcaaatacggaagctcttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_157731010_157732154
seq2: B6Ng01-315P15.g_68_1204

seq1  GAATTCAGCTCACTGACACACATCAGAATGTCCACATAGACAGCAAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCACTGACACACATCAGAATGTCCACATAGACAGCAAAGGA  50

seq1  TGGACAGAAGGAACACTCACCTGCCACCTGTCATCAGCTAGATGGGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGAAGGAACACTCACCTGCCACCTGTCATCAGCTAGATGGGAGAT  100

seq1  TTAGGAATGAGGTCCCAGTTCTGGTTCTGAGGGAAGATTCCTGCGGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAATGAGGTCCCAGTTCTGGTTCTGAGGGAAGATTCCTGCGGTTAC  150

seq1  TGCAGATCTGTTACCCGGGTACTGCACTTATGGTAATGAAGCCAGATCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATCTGTTACCCGGGTACTGCACTTATGGTAATGAAGCCAGATCCC  200

seq1  ATCAGAGAGTATGGTCAAGAGACCCAAAGCTGCGTCACCACTTAGGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGAGTATGGTCAAGAGACCCAAAGCTGCGTCACCACTTAGGAATT  250

seq1  TCTCTTACGACTTTTTACGAGGATGAAATGTTAACTGGCAAATATGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTACGACTTTTTACGAGGATGAAATGTTAACTGGCAAATATGACCT  300

seq1  CAAAATTTTTATGTGCTTGACACATAAAACATTTACAGAATAATGAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTTTATGTGCTTGACACATAAAACATTTACAGAATAATGAAATA  350

seq1  CGTTCATCTCCCACAAATTACTGAGGGCAAGAAATCATCAATCTGATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCATCTCCCACAAATTACTGAGGGCAAGAAATCATCAATCTGATAGT  400

seq1  TTTGAAAGTGAAAAATAAATTTCATGAGTGTTTAAAAAAAAATCAGTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGTGAAAAATAAATTTCATGAGTGTTTAAAAAAAAATCAGTCTG  450

seq1  TAGTGTGTTTGTATAATTCTTTACAAACCTCTTGTAAACCCACCATTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGTTTGTATAATTCTTTACAAACCTCTTGTAAACCCACCATTGTC  500

seq1  TTCCATCAGAATTACTTTTCTATTCTTCCATCAGAATTACTTAATGTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCAGAATTACTTTTCTATTCTTCCATCAGAATTACTTAATGTTTC  550

seq1  TTTCCTGAAAAGAATGAGACTGCAGTATGAGTTTCTCATACACAGCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGAAAAGAATGAGACTGCAGTATGAGTTTCTCATACACAGCTGAC  600

seq1  GGTGAGGTGCCCTTTCATGGCTGTAAGTAGGAAAGAAAATTCTGGTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGTGCCCTTTCATGGCTGTAAGTAGGAAAGAAAATTCTGGTTTTG  650

seq1  TTATAACCTGTAGTGACCTTGCAATGACCTTACTCTTTGAAGTTCAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACCTGTAGTGACCTTGCAATGACCTTACTCTTTGAAGTTCAATAG  700

seq1  ATCTACCTCTGGCTTCCTGCCAGCCCTGGACAGTGCCCCTTCCTTCATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACCTCTGGCTTCCTGCCAGCCCTGGACAGTGCCCCTTCCTTCATGT  750

seq1  ATAAACAGTTTTACATTCTCAATCTGCCTTTGGTCCCTCACATTCACTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAGTTTTACATTCTCAATCTGCCTTTGGTCCCTCACATTCACTGA  800

seq1  GTACAAAGAGAACTTAACTGGCTCTTCCAACAAAAGTGCGGTTTGCCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAGAGAACTTAACTGGCTCTTCCAACAAAAGTGCGGTTTGCCTGT  850

seq1  CAATTGCCTTTGTCTTTACTCCATCACATCACAGT-AAGGCTCGCTCTTC  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAATTGCCTTTGTCTTTACTCCATCACATCACAGTAAAGGCTCGCTCTTC  900

seq1  AGAGGAGGGAAGCAAAGGAAATATCAAATTGTTGGGAGCAGAAATACGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGGAAGCAAAGGAAATATCAAATTGTTGGGAGCAGAAATACGAA  950

seq1  CCATTCCTTGCAATCTGTTGACACTGACATCAAAACAAAAGTTTCCTAAG  999
      ||||||||||||||||||||||||||||||||||||||||  |||   ||
seq2  CCATTCCTTGCAATCTGTTGACACTGACATCAAAACAAAAAGTTC--TAG  998

seq1  AGTTATACAGCACTCAGCAGTCCTGATCTAAGCCAGATGTCCTCTCCCTG  1049
      |||   ||||||||||||||||||||||||   |||||||||||||||||
seq2  AGTATAACAGCACTCAGCAGTCCTGATCTA--GCAGATGTCCTCTCCCTG  1046

seq1  GTCTGAGACCAGTGCGTGCCCTCTGAGTGGAAAAACAAGTATTGAAAATA  1099
      |||||||| ||||||||||||||||||||| ||||| |||| || |||||
seq2  GTCTGAGA-CAGTGCGTGCCCTCTGAGTGGTAAAACCAGTAATGGAAATA  1095

seq1  ATATTTATTTCAATAGTACGTTTAGGCAAATACGGAAAGCTCTTTA  1145
      |||||||||   |||||||| |||||||||||||| ||||||||||
seq2  ATATTTATT--CATAGTACG-TTAGGCAAATACGG-AAGCTCTTTA  1137


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