BAC Information

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BAC

Clone NameB6Ng01-316P08
Chromosome3 (Build37)
Map Location 106,324,918 - 106,325,566
singlet/doubletsinglet
Overlap geneCept1
Upstream geneKcnd3, Ddx20, 6530418L21Rik, Rap1a, EG433637, Adora3, I830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591, Bclp2, LOC100043594, LOC670819, LOC100043129, Chia, Chi3l3, Chi3l4, EG624696, BC051070, 2010016I18Rik, Dennd2d
Downstream geneTmem77, LOC100043608, 4933421E11Rik, Cd53, Olfr266, Kcna3, AI504432, Kcna2, Kcna10, Gm131, A630076J17Rik, Prok1, Hbxip, Slc16a4, Rbm15, LOC383901, Kcnc4, Slc6a17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316P08.bB6Ng01-316P08.g
ACCGA107224GA107225
length1,0241,176
definitionB6Ng01-316P08.b B6Ng01-316P08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggccacctatacctactcagcttgagattactgtctcaaaaa
ccaaattaaattggccatcttgttctactgcctgataatttctactctag
aatcttccttttccacccttttctccccaattctaaaccaatatcctaat
tcccaagaaacaagcagaagttgccattatcaaataaaagagactttcaa
ccttattaagcaagatagggaaggacacttcatattcaaaggaaaaattc
accaagagaaagtctcaattctgaacatctatgccccaaatgcaaggaca
cccacattcataaaagaaacttaactaaagctcaaaacacacattgaacc
ccacacaataatagtgggagacttcaacacctcactctcaacaatggaca
ggtcatggaaacagaaactaaacagagacacagtgaaactaataaagatt
atgaaccaaacagatctgacagatatctacagaacatttcaccccaaaca
agagactactctttcatctcagcacctcatggaaccttctccaaaattga
ccgtataattggtcataaaatcagcctcaacagatacaagaagactgaaa
taatcccatgcatcctatcagatcaccatgggctaaggctagacctcaat
aataacaaaaacaacagaaaactcgcacacccttggaaactaaacaatcc
tactcaatgataacttggtcagagaagaaataaagaaagacattaaagac
ttcctggaattcaatgacaatgatgacacagcatagccaaacttatggga
tacaatgacaacagtgctaagaggataattcatagcactaagtgccctgg
taaagaaattagagagattctacactagcaactttgcaacacaccggaaa
tctctagagcaaaaataagcaaacacactcaagaggtgtagaaaggcagg
aaatagtcaaatgctgggctgaaatcaaccaaaagaaacaaagagatgat
gcaataatcaccaaaagcaaaagc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
tttagcatccttaatcatcagggaaatgcatattaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaatttcaagtgacatc
agatgctggcaaggatgtggagaaagaggaacactcctccagtgttggtg
ggattgcaagcttgtccaaccactctggaaatcagtttggcggttcctca
gaaaattggacatagtactactggagggtcacacaatacctctcctgggc
atatatccagaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagagaatgtgatacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggggggcatcttcctgagtgagggaaccaatcacaaag
gaactcacacaatatgtactcactgataaatggatattagcccagaaatt
taggatacccaagatataggatacaatttgctgaatgcttgaaccttaag
aagaacaaagaccaaaatttggacacttgccccttcttagaattgtgaaa
aaatcacccatggaaggagttacagagacaaagtttggagctgtgatgaa
aggatgcaccatctagagactgccatatgcggggatccatcccataatca
gcttccaaacgctgacaccattgcatacactagcaagattttgctgaaag
gacccagatatagctgtctcttgtgagactatgctggggcctagcaatca
cagaagtgggtactcacagtcagctattggatggatcacagggcccccaa
tggaggagctagagaagtaccccaggagctaaagagatctgcaatcctat
agtggaacatatatgaactaccagtaccccctgagctcatgtcttctagc
tgcatatgaatcagaggatgcctagtcgcttcatcttaaggaagagtcca
tttgtctgcaattatattggctcatccggcaagacggtccagaaatcgac
tggtgtgttgtgcgaggatttcgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_106324918_106325566
seq2: B6Ng01-316P08.b_51_699

seq1  GAATTCTAGGCCACCTATACCTACTCAGCTTGAGATTACTGTCTCAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCCACCTATACCTACTCAGCTTGAGATTACTGTCTCAAAAA  50

seq1  CCAAATTAAATTGGCCATCTTGTTCTACTGCCTGATAATTTCTACTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTAAATTGGCCATCTTGTTCTACTGCCTGATAATTTCTACTCTAG  100

seq1  AATCTTCCTTTTCCACCCTTTTCTCCCCAATTCTAAACCAATATCCTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCCTTTTCCACCCTTTTCTCCCCAATTCTAAACCAATATCCTAAT  150

seq1  TCCCAAGAAACAAGCAGAAGTTGCCATTATCAAATAAAAGAGACTTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGAAACAAGCAGAAGTTGCCATTATCAAATAAAAGAGACTTTCAA  200

seq1  CCTTATTAAGCAAGATAGGGAAGGACACTTCATATTCAAAGGAAAAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTAAGCAAGATAGGGAAGGACACTTCATATTCAAAGGAAAAATTC  250

seq1  ACCAAGAGAAAGTCTCAATTCTGAACATCTATGCCCCAAATGCAAGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAGAAAGTCTCAATTCTGAACATCTATGCCCCAAATGCAAGGACA  300

seq1  CCCACATTCATAAAAGAAACTTAACTAAAGCTCAAAACACACATTGAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATTCATAAAAGAAACTTAACTAAAGCTCAAAACACACATTGAACC  350

seq1  CCACACAATAATAGTGGGAGACTTCAACACCTCACTCTCAACAATGGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAATAATAGTGGGAGACTTCAACACCTCACTCTCAACAATGGACA  400

seq1  GGTCATGGAAACAGAAACTAAACAGAGACACAGTGAAACTAATAAAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGGAAACAGAAACTAAACAGAGACACAGTGAAACTAATAAAGATT  450

seq1  ATGAACCAAACAGATCTGACAGATATCTACAGAACATTTCACCCCAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCAAACAGATCTGACAGATATCTACAGAACATTTCACCCCAAACA  500

seq1  AGAGACTACTCTTTCATCTCAGCACCTCATGGAACCTTCTCCAAAATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTACTCTTTCATCTCAGCACCTCATGGAACCTTCTCCAAAATTGA  550

seq1  CCGTATAATTGGTCATAAAATCAGCCTCAACAGATACAAGAAGACTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTATAATTGGTCATAAAATCAGCCTCAACAGATACAAGAAGACTGAAA  600

seq1  TAATCCCATGCATCCTATCAGATCACCATGGGCTAAGGCTAGACCTCAA  649
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCATGCATCCTATCAGATCACCATGGGCTAAGGCTAGACCTCAA  649