MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-317A16
Chromosome	3 (Build37)
Map Location	22,375,124 - 22,376,310
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040325, 7530428D23Rik, LOC100039465, LOC100040353, Tbl1xr1, LOC545506
Downstream gene	LOC675593, LOC100040378, LOC623751, LOC100039548
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040325 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	7530428D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319506 MGI:2442162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100039465 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040353 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs

name	Tbl1xr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81004 MGI:2441730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545506 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 145 ESTs, 14 Proteins pseudo : _no_value

name	LOC675593 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins pseudo : _no_value

name	LOC100040378 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC623751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100039548 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039548
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC100040325 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250842 GeneID:100040325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040325 transcript_id : XM_001474503.1

name	7530428D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369445 GeneID:319506 MGI:2442162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 7530428D23 gene transcript_id : XM_887943.2

name	LOC100039465 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250813 GeneID:100039465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039465 transcript_id : XM_001472980.1

name	LOC100040353 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250844 GeneID:100040353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs product : similar to splicing coactivator subunit SRm300 transcript_id : XM_001474539.1

name	Tbl1xr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:130978338 GeneID:81004 MGI:2441730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transducin (beta)-like 1X-linked receptor 1 transcript_id : NM_030732.3

name	LOC100040378 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250846 GeneID:100040378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040378 transcript_id : XM_001474577.1

name	LOC100039548 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250817 GeneID:100039548
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100039548 transcript_id : XM_001473102.1

name	LOC100040325 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250843 GeneID:100040325
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474553.1

name	7530428D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369446 GeneID:319506 MGI:2442162
definition	codon_start : 1 product : hypothetical protein LOC319506 protein_id : XP_893036.2

name	LOC100039465 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250814 GeneID:100039465
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473030.1

name	LOC100040353 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250845 GeneID:100040353
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474589.1

name	Tbl1xr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543001 CCDS:CCDS17266.1 GeneID:81004 MGI:2441730
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : nuclear receptor corepressor/HDAC3 complex subunit TBLR1; F-box-like/WD repeat protein TBL1XR1; TBL1-related protein 1 product : IRA1 protein protein_id : NP_109657.2

name	LOC100040378 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250847 GeneID:100040378
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474627.1

name	LOC100039548 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250818 GeneID:100039548
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473152.1

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 1 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 2 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 3 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 4 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 5 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 6 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 7 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 8 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 9 pseudo : _no_value

name	LOC545506 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250815 GeneID:545506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 145 ESTs, 14 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_031007.1

name	LOC675593 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250816 GeneID:675593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins product : similar to spindlin pseudo : _no_value transcript_id : XR_031023.1

clone name	MSMg01-393B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487J22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-056O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072K19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-165D09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-502O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329C17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-317A16.b	B6Ng01-317A16.g
ACC	GA107284	GA107285
length	1,188	1,185
definition	B6Ng01-317A16.b	B6Ng01-317A16.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctctatgcaagagtccaccctacaaacagcagagaggactctgtg ccacacacaccatctgagatccaccataagccctcttgaattttcttcta ttattgtcaataactatatatttggcctgattgaggccttaactaaatgc tgtctttacatagttctaagaatgaaagtgttagccctgacatccctcca aagttattgcaagaacttaaatactcttatctcttcaatttaactaaaat ataagtgaaatgtaaattgagttcactataatgagccaaattaatgtttc agataagaaccacaagtctgtgtgggtttcatcagcctacctccatctcc ctagctggatgggtagatcatctgatgaattagtcaatagttagcataga aaatctgaagaagctgccaggggccctccccagctaaagcaataaataat caagcatgaaactgacagaattcctcagagtcactctctcctcccacctt caacaagctccactgcttaagaatactctctcagcccttttttctcatgt ctaaagctccttgccttaaaggcaatataagacccacgatgtattcaaag gtgcctgtgagtgcaagagttgagcctgctggcctccatatctctagaac atgtgttttccccatatccaatgtcacctctgaacatggcttcttgtgct gcttatatttcaatgcatatgtgagagctttatgtggtatgtataatatg tgcatgtttatctgtgtgtctataggtgcatgtgtacacatgtgcacatt catgtagatgccaaagggaaacataagccctgtccacattttttccgtac tcagaaactctcgctggtcaggaactggccaagtaggccaggtcaggtat ctgcctacctctgtctcctcagctgtggttgttagcagaccaccatatat ggattttctttttatgtggactcaagaggcctaacttgggtcctcatact tgtgcaacaaaaactttaccaatggaaccattttccccagagcattttta tattctaatagcacatagactagcatgagaacagtgaagctaatgatatg gaacatagctctggaggatccagagcctgaatcaagtcttacctgtgact atcagcttcttaatttgcaagagacactacaatttttc	gaattctcacctgaggaataccgaatggcagaaaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatgactaagatcaaaaattcaggtgacagc agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaactggtaagaaggacacatgctccagtat gttcatagcgtccttatttataatagccagaagctggaaagaacctagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa acggatggacctggagggcatcttcctgagtgaggtaacacattcacaaa ggaactcacacaatatgtactcactgataagtggatattagccccaaacc taggattcccaagatataaggttcaatttgctaaacacatgaaactcaag aagaatgaagactgaagtgtggacactatgcccctccttaaattgggaac aaaacacccatgaaaggagttacagagacaaagtttggagctgagatgaa aggatggaccatgtagagactgccatatccagggatccaccccataatca gcatccaaacgctgacaccattgcataccctagcaagattttatcgaaag gacccagatgtagctatctcttgtgagactatgccggggcctagcaaaca cagaagtggatgctcacagtcagtaatggatggatcacaggctcccaatg gagagctagagaaagaatccaagagctaaagggatctacaccctataggt gaacacattatgaactaaccagtaccctgagcctctgactctagcctgca cattgtatccaaagaatgctagtcgtcaatcacttgaagaagtcccatgg aacgctaccttgcatggcctcagtacaggcagcaggctaactggatgtgt gcttacgctaagccgtcgctttgttgatggatcga
quality values	Open. Hide. 58 38 28 32 58 58 62 62 45 48 62 62 47 46 47 62 62 62 62 62 47 42 62 62 62 62 62 54 56 56 56 59 43 45 44 51 51 62 46 59 59 62 59 38 62 62 62 62 62 62 62 59 49 62 62 62 62 62 62 62 59 59 62 62 62 62 59 51 59 59 59 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 42 62 62 56 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 54 48 58 58 58 58 54 58 58 54 58 54 58 54 58 54 58 58 58 58 58 58 52 52 58 54 58 54 54 58 58 58 58 58 58 54 54 54 58 54 53 58 54 54 52 58 54 54 54 58 58 42 58 58 58 58 54 58 48 54 54 58 52 58 51 51 51 58 49 50 58 53 58 50 58 54 58 58 52 58 58 54 58 58 58 54 54 49 54 51 51 46 48 53 51 49 58 54 53 58 51 51 58 58 50 51 49 58 53 58 58 58 58 51 50 54 54 49 39 49 52 53 51 38 22 58 52 58 58 47 46 51 58 58 51 43 58 58 43 43 50 46 58 58 50 58 47 51 53 41 49 52 58 52 51 51 40 58 36 53 53 53 58 58 49 52 52 51 51 58 42 47 52 53 51 54 52 54 54 34 51 37 49 53 54 39 53 53 54 53 54 54 23 42 35 54 49 54 49 54 54 53 54 54 54 51 49 42 42 40 54 42 46 54 47 47 54 52 54 52 54 53 54 47 54 33 54 53 32 49 54 37 51 37 38 38 49 40 54 33 34 52 40 53 32 40 53 41 51 36 34 32 36 38 35 34 29 40 53 32 45 33 38 29 53 32 41 28 53 53 27 49 33 42 51 30 27 27 45 31 45 31 51 46 32 31 51 36 30 31 26 32 30 31 51 51 51 51 31 29 31 25 26 35 33 42 38 30 13 46 42 38 30 31 29 31 29 31 31 31 31 46 22 33 31 26 32 23 29 28 31 31 36 25 31 23 33 27 37 20 19 19 31 41 34 31 33 32 24 7 17 18 11 27 37 37 31 27 16 29 31 31 21 31 32 31 30 37 29 31 31 29 30 31 31 5 8 7 29 25 19 31 26 8 19 31 26 33 31 27 33 22 18 42 22 29 16 17 17 17 20 27 25 26 27 33 33 32 21 44 32 8 14 21 48 43 40 6 8 18 33 32 16 25 14 13 34 27 18 21 20 25 12 17 11 21 22 15 17 21 20 20 18 37 28 32 32 27 24 26 25 15 27 15 11 17 21 16 25 31 23 13 22 28 38 38 32 25 27 24 40 25 19 14 19 7 11 9 18 21 10 15 7 10 24 28 38 38 24 16 28 28 22 11 8 21 6 16 21 21 40 40 34 15 18 11 7 11 9 26 15 25 15 17 20 8 20 17 18 7 6 5 8 9 12 12 18 10 7 10 13 7 8 7 17 12 7 6 11 4 4 3 9 6 11 20 4 8 15 9 8 6 12 13 8 4 22 8 6 3 3 5 5 8 11 12 16 8 5 23 5 5 13 12 3 9 5 6 13 5 8 5 20 10 5 2 3 2 3 3 1 1 6 3 4 15 6 4 5 4 6 6 7 9 5 7 7 12 3 2 1 3 7 10 6 6 16 5 2 5 8 6 11 9 5 6 8 6 8 5 4 17 4 1 3 3 5 15 26 28 23 6 5	Open. Hide. 62 47 44 47 62 62 62 47 56 59 59 59 37 25 26 46 33 45 56 51 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 54 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 54 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 59 59 62 62 62 62 62 62 62 59 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 56 48 56 51 46 59 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 51 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 51 59 62 59 51 59 59 62 62 62 62 62 62 62 62 62 62 59 56 54 56 59 54 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 43 62 62 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 43 62 62 52 52 62 62 62 62 62 58 54 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 58 58 54 58 58 58 43 58 52 54 54 58 54 58 54 58 58 54 46 58 49 58 54 58 49 58 54 58 58 58 52 58 52 58 46 58 54 58 58 54 48 52 41 52 48 46 58 58 58 58 51 51 58 49 58 58 58 51 40 50 58 48 51 53 58 58 58 46 39 51 38 43 47 51 52 49 58 45 38 47 52 58 48 50 58 52 51 39 49 49 41 43 35 39 21 26 38 50 50 43 58 58 54 49 53 51 58 54 49 40 52 52 58 51 58 38 50 42 54 53 50 58 53 58 58 37 58 33 33 51 51 51 41 39 32 51 58 53 58 52 53 58 52 58 50 41 34 38 51 53 53 52 51 50 44 44 50 44 40 52 52 49 37 51 50 37 49 50 54 49 40 37 39 28 51 51 45 37 32 29 44 10 16 41 41 18 22 27 27 54 40 27 17 28 25 38 23 31 49 16 29 29 15 53 34 25 53 54 52 42 52 47 18 45 53 34 53 19 37 29 37 47 51 35 14 40 29 21 41 51 34 28 47 26 31 34 33 26 31 34 18 22 30 36 40 24 40 23 40 35 32 21 35 22 45 53 53 33 31 18 41 17 26 40 45 43 20 18 13 28 18 26 24 33 37 29 31 15 14 17 51 40 29 20 29 31 26 27 23 28 31 35 29 31 37 33 33 32 31 25 30 41 46 28 34 20 32 19 22 31 42 31 48 48 37 31 31 24 26 31 46 14 21 26 31 25 37 25 19 27 33 24 31 31 20 35 31 33 23 31 24 32 23 11 11 29 24 35 37 15 28 14 30 21 26 29 23 31 24 48 46 27 12 22 26 31 24 23 24 44 31 21 24 32 24 31 25 32 18 24 22 19 27 14 31 25 25 32 19 27 24 19 13 27 15 29 7 19 32 24 32 30 21 19 29 19 16 27 27 11 11 4 4 7 14 22 19 39 33 13 17 8 21 24 31 22 13 9 18 21 21 24 30 12 14 43 33 8 6 33 14 37 19 4 6 24 6 7 21 24 13 34 16 15 47 14 10 18 13 10 6 17 22 9 11 19 18 11 6 5 15 8 6 14 5 10 13 15 4 5 21 15 27 23 19 17 25 24 24 19 15 18 16 20 10 10 15 18 21 18 20 11 3 6 9 6 6 9 13 9 18 16 7 11 16 15 10 13 9 12 6 9 9 9 7 11 5 5 5 11 8 7 4 17 26 18 7 8 18 11 3 2 4 11 5 7 7 3 1 2 5 7 19 6 4 18 6 9 2 5 2 1 2 5 2 1 3 11 14 6 13 6 7 3 4 5 4 2 1 7 5 5 25 25 2 1 1 22 8 5 24 20 5 9 7 5 6 8 8 5 11 5 1 3 2 3 3 7 3 2 1 5 3 1 1 17 11 3 3 3 2 2 6 18 3 3 4 6 4 17 3 1 3 3 2 1 2 2 1 2 2 3 8 8 11 8 5 6 3 1 5 5 5 2 3 21 6 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_22375124_22376310
seq2: B6Ng01-317A16.b_46_1233 (reverse)

seq1  GAAAAATTG--GTG-CTCTTGCAATTTTAGAACTGGATAGTCACAAGGTT  47
      |||||||||  ||| ||||||||| || ||||   ||||||||| |||| 
seq2  GAAAAATTGTAGTGTCTCTTGCAAATTAAGAAGCTGATAGTCAC-AGGTA  49

seq1  AGATTTTGAACTCA-GCTCTGGGAATCTTCAGAGCTTATGTT-CATATCA  95
      ||| ||   | ||| ||||| |||  || |||||| |||||| |||||||
seq2  AGACTT--GATTCAGGCTCT-GGATCCTCCAGAGC-TATGTTCCATATCA  95

seq1  TAAGCTTTCACTG-TCTCATGCTAGTCTATGTGCTATTAGAATAT-AAAA  143
      | ||| ||||||| ||||||||||||||||||||||||||||||| ||||
seq2  TTAGC-TTCACTGTTCTCATGCTAGTCTATGTGCTATTAGAATATAAAAA  144

seq1  TGCTCTGGGGGAAAATGGTTCCATTGGTAAAGTTTTTGTTGCACAAGTAT  193
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCT-GGGGAAAATGGTTCCATTGGTAAAGTTTTTGTTGCACAAGTAT  193

seq1  GAGGACCCAAGTTAGGCCTCTTGAGTCCACATAAAA--GAAATCCATATA  241
      ||||||||||||||||||||||||||||||||||||   |||||||||||
seq2  GAGGACCCAAGTTAGGCCTCTTGAGTCCACATAAAAAGAAAATCCATATA  243

seq1  TGGTGGTCTGCTAACAACCACAGCCTGAGGAGACAGAGGTAGGCAGATAC  291
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGGTGGTCTGCTAACAACCACAG-CTGAGGAGACAGAGGTAGGCAGATAC  292

seq1  CTGACCTGGCCTACTTGGCCAGTTCCTGACCAGCGAGAGTTTCTGAGTAC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGGCCTACTTGGCCAGTTCCTGACCAGCGAGAGTTTCTGAGTAC  342

seq1  GGAAAAAATGTGGACAGGGCTTATGTTTCCCTTTGGCATCTACATGAATG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAATGTGGACAGGGCTTATGTTTCCCTTTGGCATCTACATGAATG  392

seq1  TGCACATGTGTACACATGCACCTATAGACACACAGATAAACATGCACATA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATGTGTACACATGCACCTATAGACACACAGATAAACATGCACATA  442

seq1  TTATACATACCACATAAAGCTCTCACATATGCATTGAAATATAAGCAGCA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACATACCACATAAAGCTCTCACATATGCATTGAAATATAAGCAGCA  492

seq1  CAAGAAGCCATGTTCAGAGGTGACATTGGATATGGGGAAAACACATGTTC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGCCATGTTCAGAGGTGACATTGGATATGGGGAAAACACATGTTC  542

seq1  TAGAGATATGGAGGCCAGCAGGCTCAACTCTTGCACTCACAGGCACCTTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATATGGAGGCCAGCAGGCTCAACTCTTGCACTCACAGGCACCTTT  592

seq1  GAATACATCGTGGGTCTTATATTGCCTTTAAGGCAAGGAGCTTTAGACAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACATCGTGGGTCTTATATTGCCTTTAAGGCAAGGAGCTTTAGACAT  642

seq1  GAGAAAAAAGGGCTGAGAGAGTATTCTTAAGCAGTGGAGCTTGTTGAAGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAAAGGGCTGAGAGAGTATTCTTAAGCAGTGGAGCTTGTTGAAGG  692

seq1  TGGGAGGAGAGAGTGACTCTGAGGAATTCTGTCAGTTTCATGCTTGATTA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGAGAGAGTGACTCTGAGGAATTCTGTCAGTTTCATGCTTGATTA  742

seq1  TTTATTGCTTTAGCTGGGGAGGGCCCCTGGCAGCTTCTTCAGATTTTCTA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGCTTTAGCTGGGGAGGGCCCCTGGCAGCTTCTTCAGATTTTCTA  792

seq1  TGCTAACTATTGACTAATTCATCAGATGATCTACCCATCCAGCTAGGGAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAACTATTGACTAATTCATCAGATGATCTACCCATCCAGCTAGGGAG  842

seq1  ATGGAGGTAGGCTGATGAAACCCACACAGACTTGTGGTTCTTATCTGAAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGTAGGCTGATGAAACCCACACAGACTTGTGGTTCTTATCTGAAA  892

seq1  CATTAATTTGGCTCATTATAGTGAACTCAATTTACATTTCACTTATATTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTTGGCTCATTATAGTGAACTCAATTTACATTTCACTTATATTT  942

seq1  TAGTTAAATTGAAGAGATAAGAGTATTTAAGTTCTTGCAATAACTTTGGA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAATTGAAGAGATAAGAGTATTTAAGTTCTTGCAATAACTTTGGA  992

seq1  GGGATGTCAGGGCTAACACTTTCATTCTTAGAACTATGTAAAGACAGCAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTCAGGGCTAACACTTTCATTCTTAGAACTATGTAAAGACAGCAT  1042

seq1  TTAGTTAAGGCCTCAATCAGGCCAAATATATAGTTATTGACAATAATAGA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTAAGGCCTCAATCAGGCCAAATATATAGTTATTGACAATAATAGA  1092

seq1  AGAAAATTCAAGAGGGCTTATGGTGGATCTCAGATGGTGTGTGTGGCACA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTCAAGAGGGCTTATGGTGGATCTCAGATGGTGTGTGTGGCACA  1142

seq1  GAGTCCTCTCTGCTGTTTGTAGGGTGGACTCTTGCATAGAGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTCTCTGCTGTTTGTAGGGTGGACTCTTGCATAGAGAATTC  1188

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information