BAC Information

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BAC

Clone NameB6Ng01-317B15
Chromosome3 (Build37)
Map Location 109,244,658 - 109,367,991
singlet/doubletdoublet
Overlap geneVav3
Upstream geneSars, 5330417C22Rik, 1700013F07Rik, 2010200O16Rik, Taf13, Wdr47, LOC100043166, Clcc1, Gpsm2, 4921525H12Rik, Stxbp3a, Fndc7, Prpf38b, 4921515J06Rik, B430201A12Rik, 4930443G12Rik, Slc25a24
Downstream geneNtng1, LOC100043181, LOC100043183, Prmt6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317B15.bB6Ng01-317B15.g
ACCGA107330GA107331
length8921,146
definitionB6Ng01-317B15.b B6Ng01-317B15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,244,658 - 109,245,550)(109,366,834 - 109,367,991)
sequence
gaattccttctgtaattttgaatgattttgtggtattgcagcaataccct
aagtaggcacagttcccattgtggatctcattatggaaaatcacttatgt
tatttatggggttactgaaaatgttcacatatgataaatcataagttctt
agccattacttcctgggtcttctataaacatggccttctacatcttacag
ttgttctctctctctctctctctctctctctctctctctctctctctctc
tctatgtttttgactctgtcttgtacaccccatgatgacctcactctctc
tctcactctctggttgacctagaactcttatctctcctgctttcaccctt
tatactaagtgctggcatttttggcatgtatcaccctaccccgagggtgg
ttttactcatgcatgaagtttgttttacatccggttcttttaaaataaaa
taaaatttcatcattttcttttttattaacttatacaataaattgagaca
gggcagcacttataaataaaaaagaacagattaaaatgaagaaacttaaa
attggaagaaaaaccccaatagaagctaattagggaaagagatactattc
ttttatagcttagtagagtatcgtatttatctctgagtttcttagattct
ataacacatctatcaggctagtgcacgaggaaatatctgaggtatcctta
gacacttataccgggtaaacatagtgaaagcctaagatacaagctaagaa
tgcgtgtggacactatcagcactataaacatgataatgaagagagagatc
tgttaaaccactattgaagacaacgtagatgtgcgtgttacaagagaatc
atatgtgcaagggtgtttgcctgagtgcatgtgtgtgcactg
gaattcaatgtcactcactcatctcttcaaagtctgaagcaggaacggtc
ataagggaaagagaagaaaatcatggatgtggaaaatatgggagcctggt
ggtcagcacgagagactcaaaaacccaagggccggcattcctgtaatgta
gtcagagtttcaaaaacaaaactggagagaactttcccctgctttatggt
gaattccgagaattacgaaacaggttaaagaatgcagctgccttctaagg
gacaatctctttatatctctccatctttggcctgcagggcagttgcatta
tcttcagttgccttcttttcaccttttttatgaacctgtttctccacttt
aaaataaggggccctggatcagaaggcatttatgtctttaggacttatat
ggcgaggacaggtgtggcccctaagaacacctggccctcaccaagtaatt
caaatctaaagctacgggacttttgaaagcactctagcttgtaaagcaaa
tagcatgctcactgaagaatgggataggtaaggatgaaacaataaaacca
agtggttgttgtatcaggttgaaggttgaagagtaacagtcttaaggcat
aacatcactgtttatttcaccaccatgtagagttctgaccttcagactaa
tgaaaacagtaaccttgtctgttttacttcactgtctccagcaagtagca
gaggccatctgaactcactagccatgggaagggctactctgaaaactaaa
gagtttctctaggatagggcagtagctaacacagtagaggaactcagtca
atgtcaagatctttgccatcatgattgtccgtgcccggcacagagaacgg
cacatggcacactctgaagatatctattgaaggagcagagggacagggct
gtgctgtgatctctggcctctaagaggtctcactgttctacaactgtcca
ttttctgaactcagccctgaaataagacattctctgttctgctcttcttc
acattatccaaaataattcatgtccaccttttcctctgggaaaatcaaag
tgacatgctacttttgaactcaagctgttaagatctttcttggtttcaaa
acctcttctgaattgaagtcttatttgataaaacaggagaactcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_109244658_109245550
seq2: B6Ng01-317B15.b_48_939

seq1  GAATTCCTTCTGTAATTTTGAATGATTTTGTGGTATTGCAGCAATACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTGTAATTTTGAATGATTTTGTGGTATTGCAGCAATACCCT  50

seq1  AAGTAGGCACAGTTCCCATTGTGGATCTCATTATGGAAAATCACTTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGCACAGTTCCCATTGTGGATCTCATTATGGAAAATCACTTATGT  100

seq1  TATTTATGGGGTTACTGAAAATGTTCACATATGATAAATCATAAGTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGGGGTTACTGAAAATGTTCACATATGATAAATCATAAGTTCTT  150

seq1  AGCCATTACTTCCTGGGTCTTCTATAAACATGGCCTTCTACATCTTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTACTTCCTGGGTCTTCTATAAACATGGCCTTCTACATCTTACAG  200

seq1  TTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  250

seq1  TCTATTTTTTAGACAAGGTCTTGTATAGCCCAAGATGACCTCACACTCAC  300
      ||||| |||| |||   |||||||| | |||| ||||||||||| ||| |
seq2  TCTATGTTTTTGACTCTGTCTTGTACACCCCATGATGACCTCACTCTCTC  300

seq1  TATGAAGCTATGGTTGACCTAGAACTCTTAAGCCTCCTGCATTTACCCTT  350
      | | |  || ||||||||||||||||||||   ||||||| || ||||||
seq2  TCTCACTCTCTGGTTGACCTAGAACTCTTATCTCTCCTGCTTTCACCCTT  350

seq1  TATACTAAGTGCTGGCATTATAGGCATGTATCACCCTACCCCGTGGGTGG  400
      ||||||||||||||||||| | ||||||||||||||||||||| ||||||
seq2  TATACTAAGTGCTGGCATTTTTGGCATGTATCACCCTACCCCGAGGGTGG  400

seq1  TTTTACAAATGCATGAAGTTTGTTTTACATCCGGTTCTTTTAAAATAAAA  450
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTCATGCATGAAGTTTGTTTTACATCCGGTTCTTTTAAAATAAAA  450

seq1  TAAAATTTCTTCATTTTCTTTTTTATTTACTTATACAATAAATTGAGACA  500
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  TAAAATTTCATCATTTTCTTTTTTATTAACTTATACAATAAATTGAGACA  500

seq1  TGACAGCACATATAAATAAAAAAGAACAGATTAAAATGAAGAAACTTAAA  550
       | |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCACTTATAAATAAAAAAGAACAGATTAAAATGAAGAAACTTAAA  550

seq1  ATTGGAAGAAGAAATAGAATAGAAGCTAATTAGGGAAAGAGACACTATTC  600
      |||||||||| ||    ||||||||||||||||||||||||| |||||||
seq2  ATTGGAAGAAAAACCCCAATAGAAGCTAATTAGGGAAAGAGATACTATTC  600

seq1  TTTTATAGCTTAGTAGAGTATTGTATTTATCTCTGAGTTTCTTAAATTCT  650
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  TTTTATAGCTTAGTAGAGTATCGTATTTATCTCTGAGTTTCTTAGATTCT  650

seq1  ATAGAATATCTATCAGGCTAGTTCACGAGGAAATATATGAGGTATCCTTA  700
      |||  | ||||||||||||||| ||||||||||||| |||||||||||||
seq2  ATAACACATCTATCAGGCTAGTGCACGAGGAAATATCTGAGGTATCCTTA  700

seq1  GACACTT-TACCGGGTAGACCT-GTGAAAAGCCTAAGTTACAAGCTAAAG  748
      ||||||| ||||||||| || | ||| |||||||||| |||||||| |||
seq2  GACACTTATACCGGGTAAACATAGTG-AAAGCCTAAGATACAAGCT-AAG  748

seq1  AATGCATGTGCACACTAACAGCACTATAAAACATGATAATGAAGAGAGAG  798
      ||||| |||| |||||| ||||||||| ||||||||||||||||||||||
seq2  AATGCGTGTGGACACTATCAGCACTAT-AAACATGATAATGAAGAGAGAG  797

seq1  ATGCTGTTAAACCACTA-TGAAGACAACTTAGATATCCATTTTTAAAGAG  847
      || |||||||||||||| |||||||||| ||||| | | | ||  |||||
seq2  AT-CTGTTAAACCACTATTGAAGACAACGTAGATGTGCGTGTTACAAGAG  846

seq1  TATCTTATGTGCAGGGGTGTTTGCCTGCATGCATGTGTGTGCACTG  893
       ||| |||||||| |||||||||||||  |||||||||||||||||
seq2  AATCATATGTGCAAGGGTGTTTGCCTGAGTGCATGTGTGTGCACTG  892

seq1: chr3_109366834_109367991
seq2: B6Ng01-317B15.g_68_1213 (reverse)

seq1  CTGAGTTCCTCTCTGTTTTATC-AATAAGACCTTTCAAAATCAGGAAGAG  49
      ||||||| ||| |||||||||| ||||||||  ||| || ||| ||||||
seq2  CTGAGTT-CTC-CTGTTTTATCAAATAAGAC--TTC-AATTCA-GAAGAG  44

seq1  TTTTTGAACACAAGAAAGGATCTTTAACAGCTTGAGTTCAAAAGGTAGCC  99
       |||||||  ||||||| |||| |||||||||||||||||||| |||| |
seq2  GTTTTGAAACCAAGAAA-GATC-TTAACAGCTTGAGTTCAAAA-GTAG-C  90

seq1  ATGTCAACCTTTGATTTTCCCAGAGGAAAAGGTGGACATTGAATTATTTT  149
      ||||||  |||||||||||||||||||||||||||||| |||||||||||
seq2  ATGTCA--CTTTGATTTTCCCAGAGGAAAAGGTGGACA-TGAATTATTTT  137

seq1  GGATAATGTGAAGAAGAGCAGAACAGAGAATGTCTTATTTCAGGGCTGAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATGTGAAGAAGAGCAGAACAGAGAATGTCTTATTTCAGGGCTGAG  187

seq1  TTCAGAAAATGGACAGTTGTAGAACAGTGAGACCTCTTAGAGGCCAGAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAAATGGACAGTTGTAGAACAGTGAGACCTCTTAGAGGCCAGAGA  237

seq1  TCACAGCACAGCCCTGTCCCTCTGCTCCTTCAATAGATATCTTCAGAGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCACAGCCCTGTCCCTCTGCTCCTTCAATAGATATCTTCAGAGTG  287

seq1  TGCCATGTGCCGTTCTCTGTGCCGGGCACGGACAATCATGATGGCAAAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGTGCCGTTCTCTGTGCCGGGCACGGACAATCATGATGGCAAAGA  337

seq1  TCTTGACATTGACTGAGTTCCTCTACTGTGTTAGCTACTGCCCTATCCTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACATTGACTGAGTTCCTCTACTGTGTTAGCTACTGCCCTATCCTA  387

seq1  GAGAAACTCTTTAGTTTTCAGAGTAGCCCTTCCCATGGCTAGTGAGTTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACTCTTTAGTTTTCAGAGTAGCCCTTCCCATGGCTAGTGAGTTCA  437

seq1  GATGGCCTCTGCTACTTGCTGGAGACAGTGAAGTAAAACAGACAAGGTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCTCTGCTACTTGCTGGAGACAGTGAAGTAAAACAGACAAGGTTA  487

seq1  CTGTTTTCATTAGTCTGAAGGTCAGAACTCTACATGGTGGTGAAATAAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCATTAGTCTGAAGGTCAGAACTCTACATGGTGGTGAAATAAAC  537

seq1  AGTGATGTTATGCCTTAAGACTGTTACTCTTCAACCTTCAACCTGATACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGTTATGCCTTAAGACTGTTACTCTTCAACCTTCAACCTGATACA  587

seq1  ACAACCACTTGGTTTTATTGTTTCATCCTTACCTATCCCATTCTTCAGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACTTGGTTTTATTGTTTCATCCTTACCTATCCCATTCTTCAGTG  637

seq1  AGCATGCTATTTGCTTTACAAGCTAGAGTGCTTTCAAAAGTCCCGTAGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCTATTTGCTTTACAAGCTAGAGTGCTTTCAAAAGTCCCGTAGCT  687

seq1  TTAGATTTGAATTACTTGGTGAGGGCCAGGTGTTCTTAGGGGCCACACCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTTGAATTACTTGGTGAGGGCCAGGTGTTCTTAGGGGCCACACCT  737

seq1  GTCCTCGCCATATAAGTCCTAAAGACATAAATGCCTTCTGATCCAGGGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCGCCATATAAGTCCTAAAGACATAAATGCCTTCTGATCCAGGGCC  787

seq1  CCTTATTTTAAAGTGGAGAAACAGGTTCATAAAAAAGGTGAAAAGAAGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTTTAAAGTGGAGAAACAGGTTCATAAAAAAGGTGAAAAGAAGGC  837

seq1  AACTGAAGATAATGCAACTGCCCTGCAGGCCAAAGATGGAGAGATATAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGATAATGCAACTGCCCTGCAGGCCAAAGATGGAGAGATATAAA  887

seq1  GAGATTGTCCCTTAGAAGGCAGCTGCATTCTTTAACCTGTTTCGTAATTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGTCCCTTAGAAGGCAGCTGCATTCTTTAACCTGTTTCGTAATTC  937

seq1  TCGGAATTCACCATAAAGCAGGGGAAAGTTCTCTCCAGTTTTGTTTTTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAATTCACCATAAAGCAGGGGAAAGTTCTCTCCAGTTTTGTTTTTGA  987

seq1  AACTCTGACTACATTACAGGAATGCCGGCCCTTGGGTTTTTGAGTCTCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGACTACATTACAGGAATGCCGGCCCTTGGGTTTTTGAGTCTCTC  1037

seq1  GTGCTGACCACCAGGCTCCCATATTTTCCACATCCATGATTTTCTTCTCT  1099
      ||||||||||||||||||||||||||||||||||||              
seq2  GTGCTGACCACCAGGCTCCCATATTTTCCACATCCANNNNNNNNNNNNNN  1087

seq1  TTCCCTTATGACCGTTCCTGCTTCAGACTTTGAAGAGATGAGTGAGTGAC  1149
             |||||||||||||||||||||||||||||||||||||||||||
seq2  NNNNNNNATGACCGTTCCTGCTTCAGACTTTGAAGAGATGAGTGAGTGAC  1137

seq1  ATTGAATTC  1158
      |||||||||
seq2  ATTGAATTC  1146